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MZ326867.1__QYW02491.1__CPT_Silvanus_017__00017

Bact-Vir

MZ326867.1__QYW02491.1__CPT_Silvanus_017__00017

Identity

Accession:
MZ326867 ↗
Kingdom:
phage

Quality

78.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 49-119
PDB
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2im9A02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.82 75.0 5.78e-01 98.6% 89.8%
2p1gA02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.82 72.0 6.37e-01 95.8% 100.0%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.67 58.0 4.81e-01 100.0% 58.0%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 46.0 5.12e-01 83.1% 100.0%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 43.0 4.37e-01 73.2% 72.9%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.62 49.0 4.06e-01 88.7% 97.7%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 4.28e-01 87.3% 78.9%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 47.0 4.67e-01 94.4% 79.5%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.61 35.0 3.25e-01 70.4% 41.1%
3cpxA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.61 49.0 5.23e-01 91.5% 98.4%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 48.0 3.85e-01 93.0% 74.2%
6fezA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 47.0 4.28e-01 85.9% 98.9%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.59 46.0 4.15e-01 91.5% 97.2%
8ornD01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.58 46.0 3.53e-01 88.7% 87.5%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.58 44.0 3.76e-01 83.1% 57.9%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.58 49.0 4.48e-01 100.0% 99.0%
1upqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 45.0 3.96e-01 85.9% 79.4%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.91e-01 85.9% 81.5%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 4.25e-01 76.1% 93.8%
1v58A01 3.10.450.70 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal 0.57 40.0 4.02e-01 81.7% 73.2%
1bakA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.78e-01 87.3% 67.2%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 43.0 3.83e-01 94.4% 58.0%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.56 42.0 3.72e-01 80.3% 89.4%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.56 43.0 3.71e-01 87.3% 78.2%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.37e-01 85.9% 66.9%
4b3fX02 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.56 46.0 4.16e-01 91.5% 87.8%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.55 42.0 3.96e-01 84.5% 90.9%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.55 45.0 4.18e-01 97.2% 71.4%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.54 43.0 4.03e-01 97.2% 69.9%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 36.0 3.93e-01 78.9% 89.3%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 43.0 4.31e-01 93.0% 89.3%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.85e-01 88.7% 82.0%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 42.0 4.24e-01 84.5% 85.7%
3ec6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 42.0 3.50e-01 91.5% 48.4%
1plsA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 41.0 3.57e-01 85.9% 73.5%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 43.0 3.30e-01 94.4% 86.3%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 41.0 3.53e-01 93.0% 50.8%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 40.0 3.30e-01 84.5% 65.2%
2htiA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 40.0 3.43e-01 91.5% 49.2%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 40.0 3.39e-01 94.4% 46.0%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.52 40.0 3.20e-01 85.9% 88.9%
2aq6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 42.0 3.44e-01 94.4% 47.6%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.25e-01 100.0% 100.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 36.0 3.90e-01 76.1% 100.0%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.56e-01 93.0% 62.3%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.50 40.0 3.23e-01 90.1% 67.3%
1f1sA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.50 36.0 3.54e-01 78.9% 86.6%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.50 38.0 3.14e-01 87.3% 45.9%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.50 40.0 3.91e-01 87.3% 80.0%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
153248 219.1.1.40 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AmiA-like 0.83 76.0 5.19e-01 100.0% 58.1%
7406 219.1.1.40 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AmiA-like 0.82 75.0 4.85e-01 100.0% 56.5%
3976351 219.1.1.40 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AmiA-like 0.80 73.0 4.92e-01 98.6% 50.4%
4025316 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.79 69.0 4.87e-01 94.4% 89.8%
3291157 219.1.1.8 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.79 72.0 5.70e-01 100.0% 51.4%
3408090 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 49.0 5.00e-01 77.5% 88.6%
3260369 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 41.0 4.89e-01 73.2% 97.8%
3471771 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 49.0 5.48e-01 88.7% 100.0%
4646593 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.64 52.0 4.30e-01 100.0% 48.1%
4189515 3575.1.1.1 a+b complex topology › Nigritoxin N-terminal domain › Nigritoxin N-terminal domain › Nigritoxin N-terminal domain › ToxA_N 0.64 52.0 3.55e-01 90.1% 43.8%
4481026 4.1.1.407 beta barrels › SH3 › SH3 › SH3 › PF29661 0.64 46.0 4.93e-01 81.7% 90.0%
3731305 219.1.1.93 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.64 52.0 4.37e-01 90.1% 92.0%
3983510 219.1.1.152 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF26124 0.63 53.0 4.14e-01 97.2% 63.6%
3402542 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.62 44.0 4.32e-01 74.6% 69.3%
3475799 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.62 49.0 4.09e-01 85.9% 63.2%
3998402 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.61 53.0 4.84e-01 97.2% 93.6%
3926363 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 47.0 4.10e-01 85.9% 67.8%
3609031 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.42e-01 97.2% 64.0%
3469279 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 43.0 4.29e-01 90.1% 73.3%
3628131 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 47.0 4.20e-01 95.8% 61.0%
3622139 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 46.0 4.27e-01 94.4% 65.6%
4938828 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 42.0 4.51e-01 83.1% 90.0%
3786102 4026.1.1.2 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Bud3_N 0.59 47.0 3.55e-01 90.1% 60.5%
4026222 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 46.0 3.79e-01 88.7% 71.7%
3933782 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.59 50.0 4.78e-01 95.8% 98.8%
3258651 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.59 44.0 2.71e-01 80.3% 33.1%
4003103 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.58 46.0 3.78e-01 90.1% 54.5%
4051081 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.58 45.0 4.89e-01 84.5% 100.0%
3969290 243.4.1.1 a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbC_N 0.58 39.0 4.04e-01 78.9% 75.4%
5012955 1.1.7.128 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF515 0.58 50.0 4.75e-01 95.8% 82.4%
3515495 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 44.0 4.08e-01 97.2% 63.2%
3217670 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.58 46.0 4.67e-01 88.7% 98.6%
3476188 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 42.0 4.15e-01 78.9% 84.0%
4851967 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.56 42.0 4.46e-01 84.5% 96.8%
3467267 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.56 41.0 4.32e-01 83.1% 87.7%
4034521 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.55 44.0 4.01e-01 90.1% 75.0%
3279470 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.55 44.0 4.09e-01 87.3% 68.9%
4203746 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.55 44.0 3.38e-01 91.5% 88.0%
3995797 220.1.1.160 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD 0.55 40.0 4.14e-01 83.1% 84.6%
5012403 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 45.0 3.57e-01 98.6% 83.0%
5035742 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 41.0 4.41e-01 91.5% 100.0%
3625911 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 41.0 4.23e-01 81.7% 96.9%
5037274 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 42.0 3.72e-01 87.3% 84.5%
4092565 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.53 42.0 3.36e-01 93.0% 91.8%
4940664 9.16.1.0 beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 0.53 40.0 3.86e-01 83.1% 90.6%
3849311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 38.0 4.07e-01 77.5% 100.0%
3889630 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.53 42.0 3.23e-01 90.1% 48.9%
3935130 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 37.0 4.01e-01 81.7% 98.2%
3787118 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 44.0 2.89e-01 98.6% 36.2%
3931993 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 38.0 3.97e-01 91.5% 93.3%
5016426 1.1.5.31 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.52 43.0 3.41e-01 94.4% 42.8%
3890410 11.2.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF4550 0.51 41.0 3.31e-01 94.4% 56.2%
3507419 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 42.0 3.26e-01 100.0% 73.7%
4936051 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 35.0 3.84e-01 76.1% 98.2%
4012096 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 40.0 3.44e-01 95.8% 55.5%
4938919 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 37.0 3.90e-01 88.7% 89.2%