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MZ333133.1__QXG07719.1__X__00011

Bact-Vir

MZ333133.1__QXG07719.1__X__00011

Identity

Accession:
MZ333133 ↗
Kingdom:
phage

Quality

71.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-120
PDB
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 40.0 4.47e-01 85.1% 70.5%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 39.0 4.22e-01 86.0% 70.5%
3of6E00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 40.0 4.17e-01 86.8% 70.2%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.62 56.0 5.33e-01 100.0% 92.6%
2w59A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 38.0 4.03e-01 86.8% 71.0%
4ympA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 39.0 4.01e-01 100.0% 67.0%
4q9bA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 38.0 3.99e-01 86.0% 73.3%
4f0qD01 2.30.280.20 Mainly Beta › Roll › PUA domain-like › 0.58 52.0 4.05e-01 100.0% 85.1%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 39.0 3.83e-01 86.8% 63.1%
1fp5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 36.0 3.78e-01 85.1% 71.0%
1e62A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 41.0 4.03e-01 96.5% 70.3%
6a2bB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 34.0 3.69e-01 86.8% 73.4%
4gafB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.98e-01 86.8% 75.5%
2qtpA00 3.30.1330.110 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 0.55 44.0 4.04e-01 86.0% 100.0%
7r5mA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.55 37.0 3.04e-01 70.2% 82.5%
3q0bX00 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.55 49.0 4.51e-01 99.1% 85.1%
4wgkA02 2.60.40.2300 Mainly Beta › Sandwich › Immunoglobulin-like › Neutral/alkaline non-lysosomal ceramidase, C-terminal domain 0.54 41.0 3.93e-01 89.5% 68.4%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.54 45.0 4.50e-01 100.0% 88.2%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 39.0 4.11e-01 89.5% 86.9%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.54 39.0 4.31e-01 100.0% 96.7%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 38.0 3.92e-01 73.7% 98.1%
4fprB00 3.30.70.2910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 42.0 4.07e-01 86.0% 75.8%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 46.0 4.62e-01 100.0% 94.9%
6zzmA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.52 37.0 2.99e-01 73.7% 82.0%
3gwjA03 2.60.40.1520 Mainly Beta › Sandwich › Immunoglobulin-like › Hemocyanin, C-terminal domain 0.52 40.0 3.35e-01 93.9% 45.9%
1p1lA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 38.0 3.99e-01 89.5% 85.3%
3byqA00 3.30.1330.110 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 0.52 41.0 3.53e-01 86.8% 88.0%
1j2vA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 37.0 3.93e-01 92.1% 86.1%
4rx6D00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 39.0 4.01e-01 90.4% 86.9%
3ahpA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 37.0 3.86e-01 92.1% 83.0%
6dw1A00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.51 46.0 3.76e-01 100.0% 79.0%
2bj0A00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.51 45.0 3.78e-01 100.0% 78.8%
6y1zA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.51 45.0 3.72e-01 100.0% 77.4%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3982237 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 52.0 6.02e-01 81.6% 87.1%
4988103 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.81 62.0 6.73e-01 99.1% 95.8%
2468519 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 64.0 6.73e-01 98.2% 97.1%
4809346 1.1.13.57 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 0.76 56.0 6.38e-01 85.1% 100.0%
5052888 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 49.0 4.82e-01 94.7% 69.6%
3981111 1.1.7.89 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.65 46.0 4.17e-01 95.6% 53.5%
4618987 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.65 41.0 4.00e-01 97.4% 57.6%
3966825 1.1.13.51 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.65 60.0 5.91e-01 99.1% 98.3%
3973898 1.1.7.89 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.64 47.0 4.33e-01 95.6% 60.7%
3965794 304.133.1.1 a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL 0.62 38.0 4.10e-01 75.4% 72.6%
4971398 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.60 42.0 4.26e-01 97.4% 73.6%
4975579 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.58 39.0 3.61e-01 98.2% 51.0%
3934347 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 41.0 4.13e-01 88.6% 73.9%
5043613 1.1.9.23 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 0.56 44.0 4.33e-01 96.5% 76.8%
1565224 11.1.1.223 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ceramidse_alk_C 0.54 41.0 3.93e-01 89.5% 68.4%
5006840 1.1.9.23 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 0.54 43.0 4.17e-01 96.5% 75.2%
3552097 11.1.1.242 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › RET_CLD3 0.54 41.0 3.92e-01 86.0% 68.9%
4939497 1.1.9.23 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 0.53 42.0 4.12e-01 95.6% 77.6%
4936511 304.133.1.1 a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL 0.53 36.0 3.74e-01 71.1% 76.4%
3470213 11.1.1.223 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ceramidse_alk_C 0.52 42.0 3.92e-01 89.5% 70.0%
3213676 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.51 46.0 3.76e-01 99.1% 78.6%
3857701 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.51 47.0 3.36e-01 100.0% 82.2%
3218051 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.51 45.0 3.71e-01 98.2% 78.1%
3219666 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.50 45.0 3.62e-01 100.0% 73.0%
3208446 11.1.1.223 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ceramidse_alk_C 0.50 41.0 3.87e-01 89.5% 70.1%
3402409 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.50 45.0 3.71e-01 100.0% 81.0%
3215795 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.50 45.0 3.70e-01 100.0% 77.7%
D2 high residues 122-224
PDB
D3 high residues 226-265_366-441
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.67 48.0 4.19e-01 98.3% 49.1%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.63 43.0 4.34e-01 85.3% 68.4%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.56 39.0 3.91e-01 86.2% 68.9%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 29.0 3.22e-01 99.1% 60.4%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 32.0 3.64e-01 71.6% 76.7%
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 40.0 4.19e-01 84.5% 86.7%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.54 31.0 3.43e-01 99.1% 68.8%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.54 33.0 3.89e-01 76.7% 93.3%
1wqsA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 28.0 3.42e-01 73.3% 80.0%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 43.0 3.81e-01 86.2% 72.7%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.53 48.0 4.67e-01 100.0% 91.2%
3pftA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 41.0 3.78e-01 84.5% 73.1%
5choF00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 3.73e-01 84.5% 73.8%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 3.79e-01 84.5% 73.7%
1wxrA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 44.0 3.49e-01 94.8% 89.5%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 35.0 3.83e-01 73.3% 87.0%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.51 29.0 3.21e-01 75.0% 66.0%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.68e-01 84.5% 73.7%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 3.68e-01 85.3% 74.5%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.70e-01 83.6% 74.5%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 33.0 3.72e-01 74.1% 93.8%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3511358 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.63 51.0 5.41e-01 98.3% 99.0%
3941539 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.62 45.0 4.75e-01 76.7% 100.0%
3451456 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.62 37.0 4.03e-01 75.9% 71.6%
3816023 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.62 34.0 4.03e-01 73.3% 77.5%
5002662 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 48.0 5.13e-01 97.4% 96.0%
5078836 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 46.0 4.73e-01 79.3% 86.4%
3452017 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 34.0 3.97e-01 72.4% 77.5%
4234924 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.61 34.0 3.63e-01 73.3% 63.0%
3829402 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 34.0 4.00e-01 73.3% 80.0%
3462522 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 34.0 3.36e-01 73.3% 50.4%
4248471 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.60 34.0 3.77e-01 72.4% 70.0%
4656385 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.60 34.0 3.86e-01 73.3% 74.1%
3378225 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.59 32.0 3.70e-01 71.6% 71.8%
3368757 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.59 34.0 3.68e-01 73.3% 67.4%
4616161 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.58 33.0 3.48e-01 72.4% 60.0%
3913172 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.58 38.0 3.08e-01 79.3% 33.6%
3308868 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 34.0 3.62e-01 73.3% 63.8%
3341034 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.58 33.0 3.42e-01 73.3% 57.3%
3367405 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.58 34.0 3.56e-01 74.1% 60.9%
5053918 256.1.1.1 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.57 31.0 4.06e-01 98.3% 100.0%
3307398 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.56 34.0 3.50e-01 73.3% 62.7%
3659065 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.56 34.0 3.69e-01 74.1% 71.0%
4031205 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.54 44.0 3.67e-01 86.2% 65.7%
3365684 306.6.1.0 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like 0.54 35.0 3.73e-01 75.9% 76.0%
3329883 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.52 34.0 3.48e-01 71.6% 69.1%
D4 high residues 268-362
PDB