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MZ333135.1__QXG07790.1__X__00036

Bact-Vir

MZ333135.1__QXG07790.1__X__00036

Identity

Accession:
MZ333135 ↗
Kingdom:
phage

Quality

51.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 105-171
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.66 49.0 4.32e-01 91.0% 51.9%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.66 56.0 4.49e-01 91.0% 69.6%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.65 51.0 4.19e-01 86.6% 47.6%
3ff0A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 44.0 3.49e-01 70.1% 41.1%
2kumA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 41.0 4.46e-01 82.1% 77.2%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 56.0 3.52e-01 100.0% 46.6%
1mdaH00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 56.0 3.54e-01 100.0% 47.3%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.63 50.0 3.62e-01 85.1% 60.4%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 45.0 3.84e-01 79.1% 45.9%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.63 43.0 3.60e-01 71.6% 47.8%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 50.0 4.07e-01 91.0% 75.4%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 45.0 2.89e-01 77.6% 34.3%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 54.0 3.44e-01 100.0% 50.3%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 41.0 3.69e-01 79.1% 51.7%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 48.0 3.13e-01 86.6% 30.8%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.61 48.0 4.03e-01 92.5% 49.2%
1rjtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 39.0 3.79e-01 74.6% 58.9%
2ebkA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.61 41.0 3.32e-01 70.1% 41.4%
2i0rA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 52.0 3.38e-01 100.0% 52.0%
1eq6A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.60 46.0 3.36e-01 83.6% 41.8%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 51.0 3.36e-01 100.0% 55.3%
2y3vD00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.58 50.0 3.93e-01 100.0% 64.3%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.58 46.0 3.38e-01 86.6% 42.0%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 42.0 3.75e-01 79.1% 55.3%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.76e-01 79.1% 53.5%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 42.0 3.80e-01 85.1% 57.6%
2x6nD00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 43.0 3.21e-01 83.6% 48.3%
1atiB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.56 44.0 3.75e-01 86.6% 90.2%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 39.0 3.41e-01 74.6% 46.8%
3bg3A01 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.55 37.0 3.27e-01 70.1% 49.5%
5c9dB00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.54 37.0 3.18e-01 71.6% 45.0%
4egwA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.54 44.0 3.65e-01 94.0% 90.1%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.54 39.0 3.84e-01 85.1% 72.4%
1vwxr00 3.30.390.110 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.53 43.0 3.58e-01 89.6% 60.8%
6p2kB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 2.89e-01 100.0% 41.4%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 41.0 3.38e-01 86.6% 72.1%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 36.0 3.15e-01 71.6% 48.5%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 39.0 3.85e-01 79.1% 77.5%
3pg4A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 46.0 3.19e-01 100.0% 47.8%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 37.0 3.69e-01 74.6% 73.2%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 38.0 3.68e-01 79.1% 69.2%
4wi1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.52 46.0 3.79e-01 100.0% 99.2%
4qdgA02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.33e-01 88.1% 94.8%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.52 34.0 3.12e-01 70.1% 48.5%
2f7sA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 44.0 3.27e-01 98.5% 52.0%
2gu0A02 3.30.428.20 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain 0.50 43.0 3.30e-01 95.5% 88.7%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4314504 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.73 57.0 4.48e-01 100.0% 41.5%
3581769 4292.2.1.2 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › KIF1B 0.73 65.0 5.19e-01 100.0% 61.5%
3634384 4292.2.1.2 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › KIF1B 0.72 66.0 5.24e-01 100.0% 70.8%
3556953 109.4.1.1794 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.72 57.0 3.39e-01 83.6% 18.4%
4240482 5.1.4.298 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.71 55.0 3.28e-01 82.1% 18.2%
3930986 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.71 61.0 5.23e-01 95.5% 77.1%
3930705 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.68 61.0 5.34e-01 100.0% 74.0%
3502952 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.67 59.0 5.10e-01 95.5% 68.0%
3237854 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.67 45.0 3.75e-01 70.1% 46.1%
3272765 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.67 45.0 4.01e-01 70.1% 54.7%
3241917 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.67 51.0 3.30e-01 89.6% 19.0%
3344712 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.66 54.0 4.14e-01 91.0% 60.0%
4038285 212.1.1.14 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › CbiD 0.66 45.0 3.28e-01 71.6% 60.0%
3596800 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.65 46.0 3.25e-01 74.6% 64.8%
2229 5.1.4.25 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Me-amine-dh_H 0.64 56.0 3.54e-01 100.0% 47.3%
4182070 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.64 51.0 4.18e-01 89.6% 49.2%
None 0.63 51.0 3.87e-01 91.0% 81.2%
3737084 5.1.11.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A 0.63 57.0 3.44e-01 100.0% 33.6%
3595969 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.63 45.0 3.78e-01 76.1% 88.7%
3430539 5.1.3.68 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.63 54.0 3.32e-01 94.0% 39.8%
4015241 5.1.4.51 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_4 0.63 55.0 3.35e-01 98.5% 37.9%
3747453 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.62 50.0 3.98e-01 89.6% 56.4%
3578584 5.1.8.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.62 51.0 4.36e-01 91.0% 92.7%
3485727 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.62 47.0 4.28e-01 86.6% 60.0%
None 0.62 55.0 3.40e-01 100.0% 36.5%
4396772 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.61 49.0 3.86e-01 91.0% 94.7%
4457048 5.1.4.413 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, HELP, Beta-prop_EML, Beta-prop_EML_2 0.61 53.0 3.05e-01 98.5% 19.0%
3902096 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.61 49.0 3.86e-01 92.5% 90.3%
4538466 3197.1.1.1 a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › PipB2_N 0.61 50.0 4.11e-01 94.0% 48.5%
3701911 5.1.2.33 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.60 46.0 3.26e-01 83.6% 40.9%
4112353 5.1.4.279 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF26550 0.60 51.0 3.29e-01 100.0% 58.9%
3783181 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.60 43.0 3.65e-01 86.6% 46.4%
3373744 5.1.4.241 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › eIF2A 0.60 52.0 3.23e-01 100.0% 32.2%
5800 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.59 39.0 4.29e-01 71.6% 92.0%
185388 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.59 44.0 3.19e-01 82.1% 42.2%
3629568 2490.2.1.1 a/b three-layered sandwiches › Ribosomal protein L13/L15p/L18e/L32e › Ribosomal protein L13 and L16-A › Ribosomal protein L13 and L16-A › Ribosomal_L13 0.58 40.0 2.42e-01 73.1% 11.6%
4977196 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.58 39.0 2.66e-01 70.1% 22.0%
3197622 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.58 48.0 4.30e-01 100.0% 88.6%
3271234 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 37.0 4.20e-01 76.1% 97.8%
3783089 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.57 47.0 3.88e-01 89.6% 60.8%
3689291 220.1.1.69 beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 0.57 49.0 3.75e-01 95.5% 80.0%
3215090 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 41.0 4.23e-01 79.1% 96.9%
3287903 802.1.1.1 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.56 37.0 4.19e-01 76.1% 92.0%
3927894 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.56 46.0 3.75e-01 94.0% 74.8%
3442564 252.1.1.0 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.56 36.0 3.88e-01 76.1% 80.0%
3373579 5.1.4.304 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.55 49.0 3.05e-01 100.0% 46.8%
3810658 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.55 42.0 3.01e-01 85.1% 41.4%
2519645 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 46.0 2.97e-01 100.0% 61.1%
3781427 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.54 40.0 3.36e-01 80.6% 80.0%
3433553 5.1.3.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.54 47.0 2.99e-01 100.0% 46.0%
4851967 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.54 42.0 4.37e-01 89.6% 93.5%
3506561 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 40.0 3.87e-01 79.1% 76.0%
3873021 5.1.5.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.53 46.0 2.79e-01 100.0% 34.9%
3797649 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 42.0 3.67e-01 91.0% 75.5%
3514664 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 42.0 3.98e-01 88.1% 81.2%
3620222 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.67e-01 95.5% 60.8%
3606532 2484.6.1.0 mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR 0.53 35.0 3.24e-01 82.1% 51.1%
3258685 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 40.0 3.48e-01 88.1% 80.9%
4992532 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 35.0 3.70e-01 71.6% 81.7%
3705941 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 41.0 3.96e-01 92.5% 100.0%
3175837 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 44.0 3.50e-01 100.0% 46.7%
3801858 252.1.1.0 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.51 35.0 3.65e-01 83.6% 78.3%
3641061 5.3.1.2 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.51 42.0 3.38e-01 100.0% 85.4%
4927417 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.51 46.0 3.13e-01 100.0% 70.0%
3429037 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.51 44.0 2.86e-01 98.5% 44.6%
3672554 5.3.1.2 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.51 43.0 3.53e-01 100.0% 85.7%
D2 medium residues 1-101
PDB