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MZ333456.2__QYI86507.1__X__00055

Bact-Vir

MZ333456.2__QYI86507.1__X__00055

Identity

Accession:
MZ333456 ↗
Kingdom:
phage

Quality

91.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-75
PDB
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.68 42.0 5.03e-01 98.6% 97.9%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.66 40.0 4.46e-01 91.9% 77.6%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 45.0 4.62e-01 100.0% 76.4%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 55.0 3.44e-01 97.3% 91.0%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.63 41.0 4.60e-01 87.8% 94.2%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 4.59e-01 100.0% 78.9%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 46.0 4.92e-01 86.5% 93.4%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.69e-01 98.6% 92.9%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 53.0 3.35e-01 97.3% 70.0%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 52.0 4.50e-01 98.6% 99.2%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 48.0 4.10e-01 85.1% 96.6%
3ub1A01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 51.0 4.11e-01 91.9% 82.4%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 40.0 4.22e-01 81.1% 79.1%
6eotD01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.59 49.0 2.93e-01 91.9% 34.8%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 51.0 4.36e-01 100.0% 99.2%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.58 44.0 4.67e-01 100.0% 96.8%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 39.0 4.14e-01 86.5% 77.3%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 4.32e-01 100.0% 88.7%
2ei0A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 37.0 2.94e-01 82.4% 31.6%
1h2iA01 3.30.390.80 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 0.57 44.0 3.54e-01 83.8% 59.5%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 48.0 4.49e-01 94.6% 93.7%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 47.0 3.18e-01 91.9% 51.2%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 43.0 4.49e-01 100.0% 95.3%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 3.92e-01 93.2% 81.7%
5j60B02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 47.0 4.15e-01 100.0% 98.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 40.0 4.31e-01 98.6% 91.9%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.55 34.0 3.83e-01 87.8% 82.1%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 45.0 4.02e-01 91.9% 78.0%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 40.0 4.09e-01 91.9% 80.3%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.54 45.0 2.97e-01 91.9% 23.1%
2okmA00 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 38.0 3.13e-01 75.7% 97.9%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.54 44.0 3.12e-01 90.5% 80.3%
1f0cA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 39.0 3.34e-01 77.0% 83.9%
2yrlA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 4.21e-01 89.2% 79.5%
1t4lB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 41.0 3.85e-01 83.8% 68.9%
4gl6A01 3.10.450.570 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Domain of unknown function (DUF5037), N-terminal subdomain 0.53 44.0 4.29e-01 93.2% 84.1%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 40.0 4.19e-01 98.6% 93.9%
2c1iA01 3.30.565.50 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.52 42.0 3.72e-01 89.2% 74.8%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 42.0 3.60e-01 86.5% 68.1%
6j7cA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.52 43.0 3.49e-01 98.6% 86.1%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 45.0 3.66e-01 100.0% 62.4%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 40.0 4.24e-01 97.3% 100.0%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.52 43.0 2.86e-01 91.9% 24.2%
2pndA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.43e-01 83.8% 93.3%
3d4eA02 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.51 35.0 3.49e-01 85.1% 67.9%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 40.0 3.68e-01 86.5% 91.8%
6obtA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.51 43.0 3.04e-01 100.0% 67.9%
3kg6C00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.51 44.0 3.01e-01 100.0% 69.7%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 43.0 3.48e-01 93.2% 54.0%
5icuA00 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 39.0 3.50e-01 83.8% 87.3%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4505316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 51.0 5.55e-01 100.0% 95.0%
4025829 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 45.0 4.98e-01 98.6% 90.9%
3264879 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 44.0 4.56e-01 98.6% 72.9%
4271974 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.66 47.0 5.01e-01 100.0% 87.5%
3189510 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 44.0 4.78e-01 89.2% 85.0%
3741680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 45.0 4.97e-01 98.6% 98.2%
4034031 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.65 49.0 5.20e-01 100.0% 93.8%
3591224 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 41.0 4.74e-01 94.6% 98.0%
4241924 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.64 44.0 4.15e-01 98.6% 58.9%
5052257 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 41.0 4.47e-01 97.3% 81.7%
3673266 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 43.0 4.14e-01 89.2% 61.2%
3507420 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 43.0 4.02e-01 71.6% 100.0%
4888987 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.63 44.0 4.58e-01 100.0% 79.7%
2675820 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.63 44.0 4.16e-01 100.0% 60.4%
3597255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 44.0 4.21e-01 100.0% 63.5%
3725889 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.62 54.0 4.56e-01 100.0% 96.9%
4456732 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.62 39.0 3.82e-01 87.8% 58.7%
3660964 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.61 44.0 4.05e-01 100.0% 57.0%
3973947 3454.1.1.0 beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like 0.61 45.0 4.68e-01 78.4% 91.4%
3431181 2003.1.2.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.61 52.0 3.44e-01 98.6% 60.3%
4605602 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 42.0 4.48e-01 100.0% 84.6%
4878518 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.59 51.0 4.12e-01 97.3% 92.5%
4632722 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.59 50.0 3.55e-01 97.3% 68.2%
3484000 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 50.0 2.75e-01 93.2% 17.9%
3286642 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 4.36e-01 94.6% 74.5%
3785687 220.1.1.58 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.58 47.0 4.10e-01 89.2% 82.6%
3769980 284.1.3.4 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.58 42.0 3.94e-01 75.7% 77.8%
3661102 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.58 38.0 4.20e-01 82.4% 90.9%
3784764 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.58 50.0 3.16e-01 93.2% 34.9%
3825573 5.1.5.184 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR11_2nd 0.58 48.0 3.02e-01 91.9% 28.5%
2010569 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 44.0 3.92e-01 85.1% 58.8%
3593267 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 49.0 2.96e-01 91.9% 31.7%
3627521 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 43.0 3.96e-01 82.4% 67.0%
3308887 5.1.3.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.56 47.0 2.96e-01 93.2% 32.0%
3994731 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.56 42.0 3.21e-01 79.7% 86.7%
4030728 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.56 47.0 3.00e-01 91.9% 20.8%
3952939 220.1.1.82 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.56 46.0 4.61e-01 90.5% 96.0%
4667221 2003.1.2.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 0.56 47.0 3.49e-01 93.2% 68.0%
3351369 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.56 43.0 3.68e-01 85.1% 100.0%
3886492 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.55 44.0 4.39e-01 100.0% 86.7%
3495949 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 40.0 3.82e-01 81.1% 64.4%
3725498 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 45.0 4.61e-01 95.9% 92.9%
4208181 4.1.1.70 beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.55 43.0 4.56e-01 100.0% 100.0%
3372822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 41.0 4.15e-01 100.0% 81.3%
3480200 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 47.0 4.78e-01 100.0% 97.3%
3494765 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.55 41.0 2.97e-01 100.0% 27.3%
3660358 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 39.0 4.15e-01 98.6% 93.3%
4373440 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.54 39.0 3.60e-01 75.7% 96.8%
2859147 7091.1.1.1 a+b complex topology › C-terminal domain of DNA repair helicase RadD › C-terminal domain of DNA repair helicase RadD › C-terminal domain of DNA repair helicase RadD › PF29401 0.54 42.0 3.41e-01 86.5% 76.7%
5043533 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 41.0 4.34e-01 98.6% 96.9%
3451280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 46.0 3.71e-01 100.0% 59.4%
3935387 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.53 44.0 3.03e-01 89.2% 27.5%
1821014 4.1.1.70 beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.53 41.0 4.40e-01 100.0% 100.0%
3521739 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.53 38.0 3.73e-01 98.6% 68.2%
4939678 11.1.1.138 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc 0.52 41.0 3.57e-01 85.1% 93.9%
3717900 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.52 45.0 2.76e-01 91.9% 34.1%
3936225 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 39.0 3.98e-01 98.6% 85.7%
4847869 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.52 44.0 3.12e-01 93.2% 73.0%
3654011 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.52 38.0 3.48e-01 79.7% 76.2%
3799398 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.52 45.0 3.43e-01 94.6% 81.2%
3414142 109.27.1.0 alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.52 40.0 3.12e-01 83.8% 38.2%
3989851 11.1.1.1339 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CFSR 0.52 42.0 3.39e-01 89.2% 62.8%
5053926 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 40.0 3.93e-01 85.1% 83.7%
3931696 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.51 44.0 3.91e-01 94.6% 73.3%
3957296 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.51 43.0 3.45e-01 94.6% 98.0%
3240493 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.50 38.0 2.61e-01 82.4% 32.6%
3220436 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.50 44.0 3.36e-01 95.9% 68.7%