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MZ333456.2__QYI86538.1__X__00024

Bact-Vir

MZ333456.2__QYI86538.1__X__00024

Identity

Accession:
MZ333456 ↗
Kingdom:
phage

Quality

85.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vespunovirus› Enterococcus_phage_VEsP-1

TaxID: 2859528

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 63-181
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qjhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 46.0 4.88e-01 99.2% 83.2%
2n54B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 28.0 3.70e-01 72.3% 72.7%
1owwA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 39.0 4.38e-01 98.3% 82.8%
2ibgA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 41.0 4.43e-01 100.0% 81.4%
5eo9B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 42.0 4.32e-01 99.2% 80.0%
3sd2A01 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 34.0 4.00e-01 97.5% 85.7%
3anzC00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.57 45.0 3.40e-01 84.0% 95.9%
3biqA02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.57 43.0 3.33e-01 79.0% 46.7%
3d33A00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 36.0 4.00e-01 99.2% 79.8%
3up1A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 38.0 4.04e-01 100.0% 77.9%
4hsaF02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.56 40.0 4.25e-01 100.0% 82.9%
4e6fA00 3.30.530.80 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.56 47.0 4.21e-01 92.4% 94.7%
4jhyA00 3.30.530.80 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.56 46.0 4.27e-01 90.8% 99.4%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 45.0 4.04e-01 88.2% 87.5%
3au0A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 3.75e-01 100.0% 60.4%
3cmbA00 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.55 43.0 3.30e-01 81.5% 95.5%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 48.0 4.28e-01 96.6% 91.9%
6brbD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 32.0 3.68e-01 96.6% 79.3%
1wzlA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.91e-01 100.0% 72.7%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 40.0 4.22e-01 87.4% 85.2%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.54 37.0 3.58e-01 77.3% 60.9%
3ttgA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.54 36.0 2.66e-01 84.9% 24.3%
2r78C00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 38.0 3.87e-01 73.1% 83.6%
6a48A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 48.0 4.50e-01 97.5% 100.0%
1yq2A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.86e-01 100.0% 75.7%
2eefA01 2.60.40.2440 Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain 0.53 37.0 3.71e-01 98.3% 68.5%
2qxlB05 2.60.34.10 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 0.53 37.0 3.64e-01 94.1% 66.1%
5c86A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 4.15e-01 96.6% 92.1%
2l9pA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 43.0 3.89e-01 88.2% 89.0%
7xoiD01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 37.0 3.86e-01 72.3% 92.5%
6baoA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 38.0 3.56e-01 74.8% 69.2%
2lf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 3.94e-01 96.6% 92.0%
2yh6D00 3.30.530.50 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.51 41.0 4.30e-01 88.2% 100.0%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 45.0 4.06e-01 96.6% 85.1%
1txkA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.50 43.0 3.12e-01 96.6% 60.9%
4f3lA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 37.0 3.70e-01 77.3% 99.2%
3nhqA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 36.0 3.60e-01 73.1% 74.8%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2452961 3386.1.1.3 ↗ beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › ORF68_C 0.70 64.0 6.42e-01 100.0% 97.5%
3738408 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 38.0 4.46e-01 93.3% 88.7%
185449 3342.1.1.1 ↗ beta sandwiches › C-terminal domain in a putative lipoprotein BACOVA_00967 › C-terminal domain in a putative lipoprotein BACOVA_00967 › C-terminal domain in a putative lipoprotein BACOVA_00967 › DUF4842 0.61 54.0 4.04e-01 100.0% 46.1%
4251040 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 36.0 2.78e-01 98.3% 27.9%
3507217 4178.1.1.0 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.55 39.0 3.74e-01 73.9% 81.4%
3932467 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 42.0 3.64e-01 79.8% 56.8%
4216863 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 31.0 3.56e-01 82.4% 75.3%
3935302 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 46.0 4.23e-01 97.5% 89.7%
3392249 223.2.1.36 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 0.54 42.0 3.91e-01 84.9% 90.3%
5033320 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 39.0 4.09e-01 98.3% 83.6%
5062311 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 40.0 3.83e-01 100.0% 68.1%
4382045 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.53 39.0 3.69e-01 75.6% 76.4%
3171918 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 39.0 3.89e-01 76.5% 85.6%
4030661 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 48.0 4.23e-01 100.0% 99.4%
3739823 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.52 41.0 4.13e-01 86.6% 86.4%
3673068 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.51 41.0 3.46e-01 88.2% 71.2%
143846 331.3.1.9 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.51 45.0 4.02e-01 96.6% 96.4%
3690254 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.50 34.0 3.73e-01 85.7% 90.0%
3902105 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.50 37.0 3.52e-01 77.3% 82.1%
D2 medium residues 1-59
PDB
Domain cluster: rep: MZ333458.1__QYI86681.1__X__00047__D1-59