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MZ333456.2__WAV88246.1__X__00020

Bact-Vir

MZ333456.2__WAV88246.1__X__00020

Identity

Accession:
MZ333456 ↗
Kingdom:
phage

Quality

70.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-131
PDB
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.76 59.0 6.39e-01 91.4% 100.0%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 51.0 5.96e-01 86.4% 100.0%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.75 53.0 6.04e-01 87.7% 100.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 50.0 5.82e-01 90.1% 100.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 45.0 4.38e-01 81.5% 55.6%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.72 61.0 5.17e-01 100.0% 56.5%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 5.22e-01 93.8% 79.5%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.72 66.0 4.96e-01 100.0% 49.7%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 42.0 5.22e-01 76.5% 97.9%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.71 66.0 4.72e-01 100.0% 42.5%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 46.0 5.10e-01 92.6% 84.4%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.69 55.0 5.23e-01 92.6% 72.6%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 47.0 5.41e-01 81.5% 100.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.68 42.0 5.06e-01 97.5% 98.1%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 47.0 5.33e-01 81.5% 100.0%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 47.0 5.34e-01 82.7% 100.0%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 47.0 5.20e-01 82.7% 93.8%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 54.0 5.40e-01 96.3% 86.4%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 54.0 5.33e-01 91.4% 83.3%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.66 49.0 4.44e-01 86.4% 58.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.65 40.0 4.72e-01 80.2% 92.6%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 48.0 4.94e-01 85.2% 80.8%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 44.0 4.39e-01 80.2% 66.3%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 45.0 4.63e-01 82.7% 75.9%
3m1uA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.63 58.0 4.46e-01 100.0% 59.1%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 47.0 4.92e-01 98.8% 86.7%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.66e-01 82.7% 100.0%
2m0yA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 45.0 4.67e-01 85.2% 85.1%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 48.0 4.81e-01 87.7% 85.5%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 49.0 4.21e-01 90.1% 81.1%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 45.0 4.87e-01 98.8% 98.5%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.59 47.0 3.83e-01 88.9% 76.1%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.55e-01 88.9% 86.5%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 43.0 4.71e-01 80.2% 95.5%
3i8tA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.93e-01 92.6% 93.6%
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.56 44.0 3.66e-01 86.4% 84.2%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.56 47.0 4.04e-01 97.5% 91.2%
3kuvB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 39.0 3.35e-01 74.1% 89.5%
2oqcA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.55 43.0 2.89e-01 84.0% 89.0%
4hfsA00 2.60.120.1270 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.45e-01 92.6% 82.3%
4gzvA00 2.40.128.490 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 0.55 42.0 3.54e-01 82.7% 87.1%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.54 46.0 3.54e-01 100.0% 58.5%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 42.0 3.53e-01 87.7% 76.1%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 42.0 4.35e-01 100.0% 98.6%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 45.0 4.00e-01 95.1% 86.6%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.53 43.0 3.44e-01 92.6% 98.9%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.52 39.0 3.39e-01 81.5% 82.6%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 38.0 3.37e-01 79.0% 76.5%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.51 40.0 3.79e-01 86.4% 88.0%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 38.0 3.46e-01 84.0% 82.2%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 38.0 3.31e-01 82.7% 87.1%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.50 39.0 3.68e-01 88.9% 94.4%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3590884 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.91 84.0 6.90e-01 100.0% 58.6%
1905738 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.87 74.0 5.85e-01 100.0% 48.6%
3784612 219.1.1.115 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.77 70.0 5.44e-01 100.0% 87.6%
959119 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.76 49.0 5.91e-01 82.7% 100.0%
3782999 219.1.1.115 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.74 68.0 5.53e-01 100.0% 96.6%
3575865 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.73 54.0 5.79e-01 90.1% 90.0%
4242302 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.73 52.0 5.57e-01 91.4% 87.1%
3941170 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.73 55.0 5.90e-01 91.4% 92.9%
3240407 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.72 55.0 5.87e-01 92.6% 94.3%
3456496 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.72 52.0 4.60e-01 90.1% 53.0%
3703933 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.72 53.0 5.79e-01 91.4% 96.9%
4293453 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 55.0 5.62e-01 91.4% 83.7%
3308545 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.71 48.0 3.80e-01 79.0% 35.6%
3631165 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 62.0 6.11e-01 95.1% 92.9%
3627859 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.70 54.0 5.59e-01 92.6% 89.3%
4675879 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.70 63.0 4.36e-01 100.0% 34.0%
5074039 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 54.0 5.64e-01 91.4% 90.7%
5001589 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.69 54.0 5.02e-01 91.4% 68.0%
3578208 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 44.0 5.16e-01 96.3% 96.4%
5067227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.55e-01 93.8% 85.5%
3222210 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 54.0 5.78e-01 96.3% 98.6%
4041376 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 57.0 5.73e-01 98.8% 92.5%
3998645 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 46.0 5.11e-01 82.7% 87.7%
3457106 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 49.0 5.46e-01 93.8% 95.4%
3928136 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 48.0 5.44e-01 87.7% 100.0%
4015238 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.68 62.0 5.33e-01 100.0% 71.2%
158943 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 47.0 4.82e-01 82.7% 75.9%
3495480 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 46.0 5.21e-01 98.8% 96.7%
4466506 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.92e-01 95.1% 100.0%
3368864 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 49.0 5.40e-01 90.1% 95.4%
3662319 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 54.0 5.50e-01 90.1% 88.7%
5050368 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.67 55.0 5.20e-01 92.6% 74.5%
3224441 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 45.0 4.90e-01 81.5% 83.8%
3541996 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.66 46.0 3.50e-01 82.7% 31.1%
3909202 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 48.0 5.16e-01 84.0% 88.6%
3514867 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 46.0 4.80e-01 82.7% 78.7%
1263152 4.1.1.27 beta barrels › SH3 › SH3 › SH3 › NHase_beta_C 0.66 55.0 5.09e-01 90.1% 93.1%
4405469 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.66 58.0 5.53e-01 98.8% 91.6%
3342814 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 54.0 5.14e-01 88.9% 86.3%
3973076 109.1.1.0 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.66 47.0 3.38e-01 86.4% 26.1%
3834112 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 52.0 5.23e-01 84.0% 96.2%
3482683 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 46.0 5.18e-01 98.8% 98.3%
None 0.65 58.0 3.70e-01 98.8% 26.0%
2725406 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 47.0 4.73e-01 82.7% 74.4%
3357709 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.65 53.0 5.21e-01 87.7% 85.9%
3363448 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.65 55.0 5.41e-01 91.4% 92.9%
3890362 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 44.0 4.73e-01 70.4% 87.1%
1778160 109.1.1.6 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 0.65 46.0 3.33e-01 88.9% 25.4%
3503388 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.64 53.0 4.79e-01 97.5% 66.4%
3425872 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.64 53.0 5.17e-01 90.1% 92.2%
3923813 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 48.0 5.30e-01 88.9% 98.5%
3354687 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.64 51.0 4.45e-01 85.2% 97.5%
3905176 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 47.0 5.19e-01 84.0% 98.5%
3300226 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.64 54.0 5.46e-01 91.4% 100.0%
3356605 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 52.0 5.01e-01 87.7% 87.8%
3669214 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.64 55.0 4.73e-01 96.3% 97.7%
3645395 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 51.0 5.15e-01 86.4% 97.5%
4184660 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.60e-01 93.8% 98.5%
3357239 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.63 54.0 4.32e-01 93.8% 56.3%
3668420 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.63 55.0 4.23e-01 98.8% 73.2%
3281614 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 49.0 4.51e-01 85.2% 99.0%
2890675 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 46.0 5.06e-01 100.0% 98.4%
3930014 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.62 53.0 4.21e-01 92.6% 90.0%
4426276 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 50.0 5.29e-01 86.4% 100.0%
4121981 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.62 52.0 4.51e-01 92.6% 88.0%
3332609 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.61 52.0 4.53e-01 93.8% 100.0%
3816455 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.61 55.0 4.75e-01 100.0% 100.0%
3217772 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 49.0 4.86e-01 86.4% 91.8%
3487837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 54.0 4.07e-01 100.0% 47.5%
3893808 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.60 50.0 3.31e-01 90.1% 31.9%
3480657 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.13e-01 85.2% 100.0%
4655719 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.60 45.0 4.36e-01 80.2% 72.2%
3808601 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.90e-01 90.1% 100.0%
3302391 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.59 52.0 4.37e-01 98.8% 90.0%
3244497 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.59 50.0 4.08e-01 93.8% 72.7%
3576940 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 50.0 3.60e-01 92.6% 44.9%
3839839 4.1.1.84 beta barrels › SH3 › SH3 › SH3 › SH3_7 0.57 43.0 4.21e-01 82.7% 86.7%
158488 10.1.1.33 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TgMIC1 0.56 47.0 4.04e-01 97.5% 91.2%
3214327 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.55 46.0 3.96e-01 93.8% 98.5%
3515143 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.55 43.0 3.82e-01 87.7% 80.8%
4976853 220.5.1.1 beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.54 47.0 4.12e-01 96.3% 96.7%
4981268 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.54 39.0 2.79e-01 76.5% 75.8%
3577687 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 45.0 3.50e-01 100.0% 84.1%
3979903 4.1.1.465 beta barrels › SH3 › SH3 › SH3 › SH3_6, SH3_7 0.51 44.0 3.11e-01 100.0% 89.8%
D2 medium residues 1-50
PDB