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MZ333462.1__QYS24454.1__X__00003

Bact-Vir

MZ333462.1__QYS24454.1__X__00003

Identity

Accession:
MZ333462 ↗
Kingdom:
phage

Quality

91.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Schiekvirus› Enterococcus_phage_GVEsP-1

TaxID: 2859564

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-50
PDB
Domain cluster: rep: IMGVR_UViG_3300029305_005928-3300029305-Ga0307249_101033452__D259-301
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01476.27 best LysM 38.0 1.80e-09 98.0% 93.0%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b8vA02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.93 79.0 6.74e-01 100.0% 60.3%
4b8vA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.90 74.0 6.57e-01 100.0% 64.2%
5c8qB02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.89 72.0 7.45e-01 100.0% 93.5%
4b8vA03 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.88 71.0 7.13e-01 100.0% 87.8%
2mtzA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.78 60.0 6.05e-01 100.0% 84.0%
4bopB00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.70 54.0 3.86e-01 85.7% 45.3%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 62.0 4.98e-01 100.0% 53.4%
6dx5A00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.65 55.0 3.79e-01 95.9% 65.1%
3pfyA02 6.10.20.180 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.63 49.0 4.70e-01 85.7% 89.5%
3majA01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 41.0 2.53e-01 79.6% 71.0%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 3.87e-01 100.0% 84.1%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5004560 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.94 83.0 7.94e-01 100.0% 83.6%
3955076 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.93 78.0 8.10e-01 95.9% 97.8%
4149501 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.92 75.0 7.53e-01 100.0% 86.0%
3979943 101.15.1.3 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X 0.91 79.0 7.92e-01 98.0% 92.0%
3691758 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.91 78.0 7.49e-01 100.0% 81.8%
2809236 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 81.0 7.42e-01 100.0% 77.4%
3587382 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 78.0 7.47e-01 100.0% 83.6%
3452845 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 72.0 6.92e-01 100.0% 76.4%
3974521 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 72.0 6.67e-01 100.0% 70.0%
4492966 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.89 73.0 7.00e-01 100.0% 78.2%
3720958 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.89 73.0 7.25e-01 100.0% 86.0%
3985839 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.89 72.0 6.26e-01 100.0% 60.0%
3349612 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.89 70.0 6.98e-01 100.0% 82.0%
3898121 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.89 71.0 6.82e-01 100.0% 76.4%
4177991 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.89 75.0 7.24e-01 100.0% 81.8%
4448562 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 70.0 6.75e-01 100.0% 76.4%
3303205 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 75.0 6.95e-01 100.0% 75.0%
4022922 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 71.0 6.87e-01 100.0% 78.2%
2124917 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 71.0 4.84e-01 100.0% 26.7%
3464064 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 70.0 5.73e-01 100.0% 49.4%
4128043 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 71.0 7.34e-01 100.0% 95.6%
2042916 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 71.0 6.87e-01 100.0% 79.6%
2895417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.87 74.0 6.38e-01 100.0% 61.0%
3636424 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 73.0 7.05e-01 100.0% 81.8%
4069716 101.15.1.14 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 0.86 75.0 5.44e-01 100.0% 38.3%
3651054 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.86 74.0 5.07e-01 100.0% 29.7%
None — 0.86 74.0 5.36e-01 100.0% 36.8%
3666767 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.86 74.0 5.64e-01 100.0% 43.8%
3381619 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 74.0 4.45e-01 100.0% 15.7%
4157099 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 69.0 7.05e-01 100.0% 89.6%
3375189 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.85 73.0 6.42e-01 100.0% 65.7%
3981327 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 69.0 6.66e-01 100.0% 79.6%
3636417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.85 71.0 6.91e-01 100.0% 84.9%
4216124 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 69.0 7.20e-01 100.0% 95.6%
3359799 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.84 73.0 5.19e-01 100.0% 34.6%
3819870 101.15.1.6 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 0.84 73.0 5.16e-01 100.0% 34.1%
3417561 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 72.0 4.34e-01 100.0% 15.6%
3340381 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 57.0 6.45e-01 77.6% 100.0%
2124918 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.83 71.0 5.05e-01 100.0% 33.8%
1759182 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.82 66.0 6.60e-01 100.0% 84.3%
4023232 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.82 69.0 6.43e-01 100.0% 75.0%
4995817 101.15.1.4 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 0.82 73.0 6.48e-01 100.0% 70.0%
4491522 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 64.0 6.04e-01 100.0% 71.7%
3966498 101.15.1.3 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X 0.81 72.0 6.56e-01 100.0% 75.4%
3963519 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 70.0 6.40e-01 100.0% 73.8%
3248434 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 67.0 6.73e-01 100.0% 91.8%
3337328 101.15.1.14 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 0.80 69.0 4.23e-01 100.0% 16.5%
3166029 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.79 64.0 6.24e-01 100.0% 83.6%
3989756 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 66.0 6.69e-01 100.0% 95.8%
4440163 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.77 69.0 6.70e-01 100.0% 89.1%
4015813 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.77 62.0 5.84e-01 100.0% 73.3%
3367888 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.77 69.0 6.03e-01 100.0% 68.6%
3457321 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.76 58.0 6.07e-01 100.0% 91.1%
3448128 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.76 69.0 4.93e-01 100.0% 36.3%
4176074 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.76 66.0 6.24e-01 100.0% 83.3%
3365578 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.75 69.0 5.77e-01 100.0% 61.3%
1649977 101.15.1.2 ↗ alpha arrays › HTH › LysM domain › LysM domain › OapA 0.70 62.0 4.94e-01 100.0% 52.2%
3840704 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.68 52.0 3.52e-01 85.7% 35.2%
5036780 604.39.1.0 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.61 44.0 3.01e-01 77.6% 50.3%
4322759 101.1.2.142 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.55 44.0 3.96e-01 100.0% 79.7%