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MZ333462.1__QYS24470.1__X__00019

Bact-Vir

MZ333462.1__QYS24470.1__X__00019

Identity

Accession:
MZ333462 ↗
Kingdom:
phage

Quality

84.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Schiekvirus› Enterococcus_phage_GVEsP-1

TaxID: 2859564

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-77
PDB
Domain cluster: rep: QC4_scaffold_20_prodigal-single.1__X__X__00085__D111-174
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07866.18 best DUF1653 46.8 4.30e-12 97.1% 93.5%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.83 75.0 7.23e-01 100.0% 86.8%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.75 55.0 5.82e-01 100.0% 89.8%
4oelB00 2.40.50.170 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C 0.68 51.0 5.15e-01 94.2% 79.7%
4ckbD03 2.40.50.830 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 54.0 4.36e-01 91.3% 76.9%
1jqpA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 57.0 3.95e-01 100.0% 36.0%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.60 45.0 3.94e-01 100.0% 51.8%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 47.0 3.90e-01 88.4% 72.1%
2i4kA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 47.0 3.93e-01 89.9% 82.8%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.59 41.0 4.25e-01 75.4% 79.4%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.58 50.0 4.44e-01 100.0% 70.2%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 43.0 4.28e-01 95.7% 78.7%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 39.0 3.54e-01 73.9% 57.4%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 42.0 3.35e-01 87.0% 78.7%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 4.05e-01 98.6% 82.6%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 40.0 3.53e-01 88.4% 53.9%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 43.0 2.85e-01 100.0% 98.8%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 34.0 2.75e-01 71.0% 85.2%
4jzsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.50 42.0 3.33e-01 97.1% 89.9%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3963504 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 68.0 5.48e-01 100.0% 72.3%
4779630 219.1.1.1 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.68 51.0 5.15e-01 94.2% 79.7%
1283692 2.1.1.102 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCEL_GT_OB 0.66 54.0 4.36e-01 91.3% 76.1%
3607981 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 52.0 5.14e-01 100.0% 82.4%
3783617 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.63 55.0 5.30e-01 97.1% 90.0%
4023575 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 43.0 3.88e-01 71.0% 62.1%
3812766 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 51.0 5.13e-01 98.6% 88.6%
4072295 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.61 48.0 3.04e-01 88.4% 87.1%
3491784 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.60 52.0 4.36e-01 100.0% 72.0%
3619203 211.1.1.29 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Chromadorea_ALT 0.60 41.0 4.66e-01 94.2% 100.0%
3643907 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.60 47.0 3.68e-01 88.4% 60.6%
3564807 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.60 47.0 3.71e-01 88.4% 63.9%
3841771 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.60 47.0 3.74e-01 88.4% 64.0%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.60 44.0 4.28e-01 95.7% 70.0%
3297966 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.59 51.0 4.34e-01 100.0% 75.8%
4946993 4.1.1.479 ↗ beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.59 45.0 4.53e-01 100.0% 82.9%
4960051 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.59 44.0 3.31e-01 81.2% 50.0%
3894481 277.1.1.5 ↗ a+b two layers › PX domain › PX domain › PX domain › Vps5 0.59 47.0 3.00e-01 89.9% 88.4%
3782292 4.1.1.170 ↗ beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.58 52.0 4.95e-01 100.0% 88.7%
3933337 109.4.1.2535 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Alpha_kinase 0.58 50.0 3.07e-01 100.0% 23.2%
3592839 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 51.0 4.44e-01 100.0% 82.9%
3926984 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 44.0 3.29e-01 89.9% 42.5%
3430260 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 47.0 2.99e-01 94.2% 35.6%
3593335 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 48.0 3.19e-01 97.1% 27.2%
3266842 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 42.0 3.61e-01 88.4% 72.0%
3198697 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 48.0 3.11e-01 98.6% 28.3%
3256330 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 3.87e-01 87.0% 89.5%
5037955 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 44.0 2.87e-01 95.7% 72.9%
3595719 7525.1.1.2 ↗ a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 0.52 44.0 2.79e-01 95.7% 91.9%
3648057 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 39.0 2.50e-01 82.6% 20.3%
3433122 241.15.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.52 42.0 3.63e-01 94.2% 79.1%