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MZ333462.1__QYS24538.1__X__00089

Bact-Vir

MZ333462.1__QYS24538.1__X__00089

Identity

Accession:
MZ333462 ↗
Kingdom:
phage

Quality

92.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Schiekvirus› Enterococcus_phage_GVEsP-1

TaxID: 2859564

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 119-229
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 35.0 3.52e-01 100.0% 47.8%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 31.0 2.83e-01 99.1% 33.1%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 33.0 4.01e-01 99.1% 76.4%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 29.0 3.76e-01 99.1% 75.4%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 30.0 3.89e-01 99.1% 79.4%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 32.0 3.28e-01 100.0% 49.5%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 31.0 2.86e-01 100.0% 36.2%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 30.0 3.42e-01 99.1% 60.7%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 30.0 3.12e-01 99.1% 49.0%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 29.0 3.76e-01 99.1% 79.7%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 29.0 2.84e-01 99.1% 40.5%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 31.0 2.86e-01 100.0% 39.0%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 29.0 3.70e-01 99.1% 81.2%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 31.0 3.21e-01 99.1% 53.8%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 29.0 3.53e-01 99.1% 74.3%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 31.0 3.31e-01 99.1% 59.4%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 31.0 3.21e-01 99.1% 55.3%
3hluA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 24.0 2.91e-01 72.1% 64.4%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928190 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.68 32.0 3.63e-01 99.1% 58.3%
4940742 101.1.2.554 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30184 0.63 34.0 3.78e-01 99.1% 67.1%
4029392 375.1.1.179 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.61 32.0 2.66e-01 100.0% 29.7%
4133158 101.1.2.554 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30184 0.60 32.0 3.45e-01 99.1% 58.9%
5064977 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 34.0 3.99e-01 100.0% 78.8%
5016748 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.60 30.0 2.98e-01 99.1% 44.2%
3509042 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 33.0 3.19e-01 100.0% 47.7%
5042462 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 30.0 2.61e-01 99.1% 32.7%
5013924 101.1.2.554 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30184 0.56 32.0 3.54e-01 99.1% 68.9%
5082509 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 30.0 2.89e-01 100.0% 44.6%
4994432 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 30.0 3.12e-01 99.1% 58.1%
4508433 314.1.1.3 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.52 45.0 3.10e-01 93.7% 51.1%
3746945 5051.1.1.1 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF 0.51 39.0 2.52e-01 82.0% 26.8%
D2 medium residues 9-96
PDB
Domain cluster: rep: NC_049856.1__YP_009905460.1__H1Z35_gp116__00135__D11-73