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UBF20674.1
Arc-VirMZ334505__UBF20674.1__HRTV-9-gp1__00001
Identity
- Accession:
- MZ334505 ↗
- Protein ID:
- UBF20674.1 ↗
- Kingdom:
- archaea
Quality
56.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Hafunaviridae›
Haloferacalesvirus›
Halorubrum_virus_HRTV-9
TaxID: 2878011
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-102
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18545.6 best | HalOD1 | 41.3 | 1.90e-10 | 87.1% | 94.6% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2n54B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 37.0 | 4.17e-01 | 100.0% | 66.7% |
| 4gewA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.67 | 34.0 | 3.60e-01 | 81.2% | 54.5% |
| 3vn5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.63 | 39.0 | 4.28e-01 | 97.6% | 76.8% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.62 | 39.0 | 4.22e-01 | 96.5% | 75.0% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.59 | 42.0 | 4.66e-01 | 100.0% | 97.0% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 41.0 | 4.19e-01 | 91.8% | 76.5% |
| 5llwA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 51.0 | 5.03e-01 | 100.0% | 95.7% |
| 2ea9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 50.0 | 4.87e-01 | 100.0% | 95.7% |
| 3v67A01 | 3.30.450.210 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Two-component sensor protein CpxA, periplasmic domain | 0.54 | 42.0 | 3.76e-01 | 100.0% | 58.7% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.54 | 42.0 | 3.89e-01 | 84.7% | 94.5% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.52 | 36.0 | 3.46e-01 | 100.0% | 62.5% |
| 6czfA01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.51 | 41.0 | 2.79e-01 | 98.8% | 23.1% |
| 3fvcA01 | 2.30.30.1230 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 34.0 | 3.48e-01 | 92.9% | 71.2% |
| 2gumB01 | 2.30.30.1230 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 3.97e-01 | 97.6% | 78.0% |
| 2vqrA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.51 | 42.0 | 2.77e-01 | 100.0% | 66.0% |
| 1sqwA01 | 3.10.450.220 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 40.0 | 3.89e-01 | 85.9% | 83.9% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3222457 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.72 | 42.0 | 3.06e-01 | 98.8% | 22.2% |
| 4659650 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.67 | 42.0 | 4.15e-01 | 100.0% | 60.0% |
| 5046979 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 52.0 | 4.72e-01 | 100.0% | 64.5% |
| 5046768 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.64 | 42.0 | 4.65e-01 | 100.0% | 82.9% |
| 5043206 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.63 | 42.0 | 4.31e-01 | 100.0% | 72.5% |
| 4031431 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.62 | 38.0 | 4.33e-01 | 100.0% | 81.5% |
| 4286824 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.62 | 49.0 | 4.85e-01 | 96.5% | 83.3% |
| 5005470 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.61 | 39.0 | 3.72e-01 | 100.0% | 55.0% |
| 185643 | 223.2.1.11 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › AP3D1,Longin | 0.61 | 45.0 | 3.64e-01 | 100.0% | 41.9% |
| 4958012 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.61 | 38.0 | 4.06e-01 | 100.0% | 72.0% |
| 5037187 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.61 | 39.0 | 3.76e-01 | 100.0% | 57.9% |
| 5078530 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 47.0 | 4.41e-01 | 100.0% | 67.6% |
| 5058484 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.60 | 38.0 | 4.13e-01 | 100.0% | 77.1% |
| 4946228 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 47.0 | 4.11e-01 | 100.0% | 57.7% |
| 5060936 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 38.0 | 3.75e-01 | 100.0% | 62.2% |
| 3785779 | 604.3.1.11 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 | 0.58 | 37.0 | 2.65e-01 | 100.0% | 22.0% |
| 5028032 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.58 | 39.0 | 3.94e-01 | 100.0% | 68.2% |
| 5074857 | 223.2.1.59 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Roc | 0.58 | 48.0 | 3.19e-01 | 100.0% | 23.9% |
| 4029539 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 45.0 | 4.09e-01 | 100.0% | 60.8% |
| 5073557 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 48.0 | 4.10e-01 | 100.0% | 56.4% |
| None | — | 0.57 | 43.0 | 3.68e-01 | 100.0% | 49.3% | |
| 5067782 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.56 | 36.0 | 4.00e-01 | 96.5% | 80.0% |
| 4944318 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 48.0 | 4.08e-01 | 100.0% | 57.6% |
| 5051015 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 47.0 | 3.87e-01 | 100.0% | 50.3% |
| 6882 | 223.4.1.1 ↗ | a+b three layers › Profilin-like › YagB/YeeU/YfjZ-like › YagB/YeeU/YfjZ-like › CbeA_antitoxin | 0.56 | 50.0 | 4.51e-01 | 100.0% | 77.8% |
| 4976967 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 50.0 | 4.17e-01 | 100.0% | 56.7% |
| 3738165 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.55 | 45.0 | 4.03e-01 | 100.0% | 61.6% |
| 5014721 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.55 | 39.0 | 3.78e-01 | 100.0% | 65.3% |
| 3461881 | 223.2.1.15 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin | 0.55 | 45.0 | 4.00e-01 | 100.0% | 61.6% |
| 5009785 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.55 | 41.0 | 3.28e-01 | 100.0% | 38.3% |
| 5045719 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 46.0 | 4.10e-01 | 100.0% | 63.7% |
| 5049349 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 49.0 | 4.00e-01 | 100.0% | 54.2% |
| 3701432 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.54 | 29.0 | 2.65e-01 | 100.0% | 40.0% |
| 3648069 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.54 | 43.0 | 3.48e-01 | 100.0% | 44.1% |
| 4143716 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.52 | 40.0 | 3.76e-01 | 84.7% | 93.6% |
| 5049585 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.52 | 46.0 | 3.89e-01 | 100.0% | 98.6% |
| 4947839 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 45.0 | 3.94e-01 | 100.0% | 64.0% |
| 5038289 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 43.0 | 3.80e-01 | 100.0% | 60.0% |
| 4029311 | 5.1.4.73 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RAB3GAP2_N | 0.52 | 46.0 | 3.05e-01 | 100.0% | 99.5% |
| 3882464 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 32.0 | 3.34e-01 | 83.5% | 68.0% |
| 3387446 | 7579.1.1.60 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF2920 | 0.51 | 39.0 | 2.56e-01 | 82.4% | 60.8% |
| 3995919 | 323.1.1.6 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf | 0.51 | 44.0 | 2.75e-01 | 100.0% | 34.1% |