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UBF21668.1

Arc-Vir

MZ334513__UBF21668.1__HJTV-2-gp48__00048

Identity

Accession:
MZ334513 ↗
Protein ID:
UBF21668.1 ↗
Kingdom:
archaea

Quality

88.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thumleimavirales› Hafunaviridae› Haloferacalesvirus› Haloarcula_virus_HJTV-2

TaxID: 2877986

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 31-93
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4h63Q04 3.90.1150.120 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.77 69.0 5.62e-01 100.0% 74.1%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.74 61.0 4.64e-01 90.5% 43.8%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.74 51.0 3.84e-01 73.0% 62.1%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.72 64.0 5.34e-01 100.0% 72.5%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.72 62.0 4.94e-01 100.0% 84.1%
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.71 61.0 4.99e-01 98.4% 72.3%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.71 62.0 4.97e-01 100.0% 81.2%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 60.0 4.65e-01 96.8% 69.3%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.69 47.0 4.84e-01 73.0% 91.8%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.68 48.0 3.72e-01 73.0% 43.5%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 58.0 4.41e-01 100.0% 47.9%
4on1A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.68 51.0 3.90e-01 79.4% 61.2%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.68 48.0 4.18e-01 74.6% 50.5%
3cwxA00 3.40.1420.20 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD 0.68 54.0 4.36e-01 88.9% 68.8%
2yfoA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.66 56.0 3.61e-01 95.2% 99.4%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.66 58.0 4.42e-01 100.0% 98.7%
1r26A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 53.0 4.39e-01 88.9% 93.8%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.66 52.0 3.81e-01 87.3% 82.1%
2xn1A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.65 56.0 3.58e-01 96.8% 99.4%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.65 55.0 3.53e-01 95.2% 97.1%
1jyaB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.65 55.0 4.54e-01 98.4% 84.3%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.65 56.0 5.29e-01 100.0% 86.1%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.63 54.0 3.51e-01 96.8% 99.3%
1cqaA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.61 49.0 3.98e-01 88.9% 61.0%
2la7A01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.61 46.0 3.67e-01 81.0% 68.0%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 47.0 3.81e-01 84.1% 72.6%
3q6aB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 51.0 4.00e-01 95.2% 60.4%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.60 51.0 3.50e-01 100.0% 74.7%
6v55A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 42.0 3.01e-01 74.6% 57.9%
3imoC00 3.30.920.70 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › 0.59 51.0 4.36e-01 98.4% 59.8%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 46.0 3.73e-01 90.5% 86.2%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.59 48.0 4.04e-01 95.2% 54.2%
1ei5A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 46.0 3.05e-01 92.1% 56.1%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.59 45.0 3.73e-01 85.7% 87.5%
3u4yA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 45.0 2.91e-01 88.9% 37.3%
4cciA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 50.0 3.30e-01 95.2% 75.3%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.57 38.0 3.06e-01 88.9% 32.8%
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 49.0 3.28e-01 100.0% 23.8%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 42.0 3.47e-01 85.7% 82.1%
3u9sE04 3.30.700.40 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.56 38.0 3.15e-01 76.2% 36.8%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.55 44.0 4.12e-01 92.1% 80.7%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 42.0 3.56e-01 87.3% 86.7%
5h4eA02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.55 41.0 3.43e-01 81.0% 58.0%
4m00A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 43.0 3.10e-01 96.8% 67.6%
2lc1A00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.54 43.0 3.86e-01 96.8% 80.0%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 41.0 3.43e-01 88.9% 97.6%
1b12A02 2.170.230.10 Mainly Beta › Beta Complex › Signal Peptidase I; Chain: A, domain 2 › 0.53 36.0 3.48e-01 71.4% 67.6%
2nykA01 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.51 42.0 3.36e-01 100.0% 92.6%
2yt4A03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 43.0 3.73e-01 100.0% 60.6%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5018724 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.83 58.0 5.01e-01 73.0% 52.6%
5003371 302.4.1.0 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.82 57.0 5.14e-01 73.0% 57.6%
3597007 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.75 54.0 3.91e-01 76.2% 31.8%
3984091 3180.1.1.1 ↗ a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG 0.74 57.0 4.79e-01 82.5% 61.0%
3212817 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.73 60.0 4.49e-01 88.9% 47.3%
4179057 4099.1.1.26 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 0.72 63.0 5.42e-01 100.0% 81.0%
3235669 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.71 59.0 4.63e-01 95.2% 44.8%
3596915 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.71 64.0 3.70e-01 100.0% 29.5%
3737176 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.71 61.0 5.62e-01 100.0% 87.1%
1906032 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.71 61.0 4.54e-01 100.0% 49.7%
4945847 298.1.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.70 49.0 3.61e-01 74.6% 73.9%
3233815 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.69 58.0 3.83e-01 95.2% 22.8%
4284036 4099.1.1.26 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 0.68 58.0 4.97e-01 98.4% 75.2%
3233005 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.68 59.0 3.88e-01 95.2% 24.3%
4580534 241.3.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › N domain of copper amine oxidase › N domain of copper amine oxidase › Cu_amine_oxidN1 0.68 57.0 4.82e-01 96.8% 59.1%
1318719 272.2.1.1 ↗ a+b two layers › TolA/TonB C-terminal domain › hypothetical protein BACUNI_01052 › hypothetical protein BACUNI_01052 › DUF5043 0.67 51.0 3.72e-01 82.5% 70.8%
5078256 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.67 49.0 3.44e-01 77.8% 65.1%
3743299 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.67 50.0 4.20e-01 81.0% 53.6%
3211176 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.67 58.0 3.82e-01 95.2% 23.9%
4589583 2008.1.1.191 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_HpaII 0.66 58.0 4.22e-01 96.8% 64.7%
3219544 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 57.0 3.66e-01 95.2% 21.4%
3707133 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.66 59.0 4.06e-01 100.0% 75.2%
3236870 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 54.0 4.24e-01 88.9% 53.8%
2756455 9.11.1.0 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.66 46.0 4.18e-01 74.6% 55.1%
3245311 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 56.0 4.71e-01 95.2% 56.2%
3979335 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.64 57.0 4.64e-01 100.0% 86.7%
3986751 3197.1.1.0 ↗ a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 0.64 49.0 4.12e-01 84.1% 64.5%
3228478 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.63 52.0 4.15e-01 96.8% 44.4%
5046573 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.62 51.0 3.92e-01 95.2% 45.6%
3850090 4099.1.1.19 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM8 0.60 49.0 3.98e-01 96.8% 57.2%
3734952 4252.1.1.12 ↗ beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.60 48.0 3.65e-01 98.4% 58.9%
4554156 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.60 50.0 3.42e-01 98.4% 96.5%
3760199 331.2.1.6 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › Med14_RM8 0.60 49.0 4.34e-01 96.8% 79.0%
3281774 9.1.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.60 46.0 3.86e-01 84.1% 72.7%
3218510 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.60 51.0 4.41e-01 95.2% 62.2%
3937848 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.59 50.0 3.59e-01 95.2% 74.9%
4025460 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 49.0 3.13e-01 93.7% 39.1%
None — 0.58 49.0 2.99e-01 93.7% 25.3%
3672647 5.1.4.297 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.58 47.0 2.89e-01 92.1% 32.6%
3672152 5.1.4.147 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N 0.58 47.0 2.97e-01 90.5% 66.9%
2320152 3264.1.1.0 ↗ 0.56 47.0 3.56e-01 100.0% 38.9%
4260682 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.56 50.0 3.57e-01 100.0% 50.3%
3748485 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.56 48.0 3.44e-01 98.4% 53.3%
3605600 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 44.0 2.68e-01 87.3% 86.9%
3636368 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.53 43.0 3.44e-01 92.1% 87.1%
3468562 331.1.1.5 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.52 41.0 3.73e-01 88.9% 68.9%
3308192 59.1.1.4 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Ctf8 0.52 41.0 3.44e-01 85.7% 65.7%
3483861 331.1.1.5 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.51 40.0 3.79e-01 92.1% 71.2%
3643744 5.1.4.122 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF295 0.50 40.0 2.69e-01 92.1% 35.2%