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UBF22627.1
Arc-VirMZ334521__UBF22627.1__HRTV-25-gp46__00046
Identity
- Accession:
- MZ334521 ↗
- Protein ID:
- UBF22627.1 ↗
- Kingdom:
- archaea
Quality
87.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Hafunaviridae›
Laminvirus›
Halorubrum_tailed_virus_25
TaxID: 2878006
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-133
Domain cluster:
rep: KC292024__AGM11234.1__HHTV2-69__00069__D23-133
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4esjA01 | 3.40.210.30 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain | 0.63 | 55.0 | 4.98e-01 | 98.3% | 70.5% |
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.61 | 29.0 | 4.03e-01 | 75.7% | 92.7% |
| 2vldA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.59 | 42.0 | 4.32e-01 | 99.1% | 78.0% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 47.0 | 4.53e-01 | 87.0% | 88.7% |
| 2zutA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 28.0 | 3.70e-01 | 76.5% | 89.8% |
| 4x28A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.56 | 40.0 | 4.13e-01 | 74.8% | 100.0% |
| 3vx8A02 | 3.40.140.70 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 N-terminal domain | 0.55 | 44.0 | 3.94e-01 | 87.8% | 84.1% |
| 2p9mB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 41.0 | 3.94e-01 | 80.0% | 80.6% |
| 1xkfB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 41.0 | 4.04e-01 | 80.9% | 84.6% |
| 3fv6A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 40.0 | 3.75e-01 | 80.0% | 75.2% |
| 4cooA03 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 40.0 | 3.81e-01 | 80.0% | 72.3% |
| 3uueA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 48.0 | 3.62e-01 | 100.0% | 78.5% |
| 3ddjA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 40.0 | 3.74e-01 | 80.0% | 77.6% |
| 4x28C02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.53 | 38.0 | 4.03e-01 | 75.7% | 96.0% |
| 3sl7A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 39.0 | 3.70e-01 | 80.9% | 81.6% |
| 2g3aA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 42.0 | 4.40e-01 | 99.1% | 95.2% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 33.0 | 3.57e-01 | 84.3% | 75.8% |
| 2fiwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 38.0 | 3.44e-01 | 99.1% | 55.6% |
| 3devA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.51 | 42.0 | 4.25e-01 | 92.2% | 87.9% |
| 7kbrC01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 38.0 | 3.67e-01 | 79.1% | 100.0% |
| 4dqwA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 39.0 | 3.93e-01 | 80.9% | 89.4% |
| 3kpbA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 38.0 | 3.84e-01 | 80.9% | 84.9% |
| 2jdcA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 42.0 | 3.95e-01 | 93.9% | 99.3% |
| 1wdjA00 | 3.90.1570.10 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › tt1808, chain A | 0.50 | 44.0 | 3.73e-01 | 95.7% | 85.5% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5013988 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 62.0 | 5.99e-01 | 100.0% | 82.3% |
| 5013306 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 64.0 | 5.72e-01 | 97.4% | 88.4% |
| 5035744 | 2008.1.1.77 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C | 0.69 | 58.0 | 5.66e-01 | 96.5% | 83.2% |
| 4950791 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.64 | 46.0 | 3.97e-01 | 75.7% | 48.6% |
| 5005260 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.64 | 49.0 | 3.77e-01 | 80.9% | 41.9% |
| 3958434 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.63 | 36.0 | 4.48e-01 | 95.7% | 100.0% |
| 4955137 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.62 | 48.0 | 4.11e-01 | 81.7% | 55.6% |
| 5075341 | 2488.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_2 | 0.61 | 46.0 | 3.85e-01 | 78.3% | 60.5% |
| 5053513 | 2488.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_2 | 0.61 | 46.0 | 3.71e-01 | 78.3% | 57.7% |
| 4938264 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.60 | 44.0 | 4.32e-01 | 100.0% | 70.4% |
| 3952449 | 2008.1.1.114 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 | 0.60 | 42.0 | 4.29e-01 | 100.0% | 75.5% |
| 5029659 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.59 | 43.0 | 4.34e-01 | 98.3% | 74.8% |
| 5031677 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.59 | 47.0 | 4.11e-01 | 84.3% | 71.8% |
| 4981806 | 1.1.9.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA | 0.58 | 50.0 | 4.81e-01 | 97.4% | 86.7% |
| 3492356 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.58 | 46.0 | 3.41e-01 | 86.1% | 63.3% |
| 4379699 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 28.0 | 3.72e-01 | 98.3% | 84.6% |
| 4985846 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.57 | 44.0 | 4.17e-01 | 80.9% | 79.3% |
| 4976802 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 41.0 | 3.89e-01 | 100.0% | 63.7% |
| 3971323 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.56 | 44.0 | 4.49e-01 | 81.7% | 89.1% |
| 5014682 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.56 | 43.0 | 4.18e-01 | 100.0% | 72.3% |
| 3952801 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.56 | 43.0 | 3.95e-01 | 80.9% | 84.7% |
| 4964155 | 1.1.9.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA | 0.56 | 48.0 | 4.53e-01 | 94.8% | 82.1% |
| 4956819 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 43.0 | 4.43e-01 | 100.0% | 86.4% |
| 3289323 | 4052.1.1.1 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA_dh_M | 0.56 | 41.0 | 4.34e-01 | 78.3% | 100.0% |
| 4351693 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.55 | 45.0 | 4.60e-01 | 93.0% | 91.3% |
| 3959530 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.55 | 41.0 | 4.28e-01 | 80.0% | 100.0% |
| 4381486 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.54 | 37.0 | 4.12e-01 | 98.3% | 89.8% |
| 5070153 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.54 | 41.0 | 4.20e-01 | 92.2% | 80.9% |
| 3976034 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 37.0 | 3.76e-01 | 97.4% | 70.4% |
| 2715553 | 2008.1.1.34 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc | 0.54 | 43.0 | 4.24e-01 | 98.3% | 80.8% |
| 5051114 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.54 | 43.0 | 4.47e-01 | 92.2% | 90.0% |
| 4998521 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.54 | 44.0 | 4.47e-01 | 99.1% | 90.9% |
| 4177916 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.53 | 47.0 | 4.16e-01 | 95.7% | 87.9% |
| 3546666 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.53 | 46.0 | 4.18e-01 | 100.0% | 69.3% |
| 4937409 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.53 | 40.0 | 3.69e-01 | 80.9% | 85.3% |
| 3280135 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.52 | 39.0 | 4.12e-01 | 80.0% | 100.0% |
| 3291189 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.52 | 40.0 | 4.24e-01 | 80.9% | 100.0% |
| 4961086 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.52 | 40.0 | 3.55e-01 | 80.9% | 84.8% |
| 4650778 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.52 | 46.0 | 3.94e-01 | 95.7% | 87.2% |
| 2673358 | 4052.1.1.1 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA_dh_M | 0.52 | 38.0 | 4.03e-01 | 76.5% | 99.0% |
| 5042118 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 47.0 | 4.23e-01 | 100.0% | 72.3% |
| 4973068 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.52 | 39.0 | 3.83e-01 | 80.9% | 84.4% |
| 4245081 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.52 | 45.0 | 3.87e-01 | 95.7% | 85.9% |
| 4968344 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.51 | 47.0 | 3.55e-01 | 100.0% | 58.4% |
| 4970645 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 39.0 | 3.76e-01 | 80.9% | 85.4% |
| 4952838 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 39.0 | 2.94e-01 | 80.9% | 35.8% |
| 3957276 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.50 | 38.0 | 4.07e-01 | 80.9% | 100.0% |
| 3708190 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.50 | 45.0 | 3.33e-01 | 97.4% | 80.3% |
| 3285936 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.50 | 38.0 | 4.06e-01 | 80.9% | 100.0% |
| 3222006 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.50 | 36.0 | 3.89e-01 | 76.5% | 86.0% |
| 11035 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.50 | 44.0 | 3.73e-01 | 95.7% | 85.5% |
| 4941251 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 40.0 | 3.76e-01 | 100.0% | 69.2% |