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UBF22671.1
Arc-VirMZ334521__UBF22671.1__HRTV-25-gp90__00090
Identity
- Accession:
- MZ334521 ↗
- Protein ID:
- UBF22671.1 ↗
- Kingdom:
- archaea
Quality
89.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Hafunaviridae›
Laminvirus›
Halorubrum_tailed_virus_25
TaxID: 2878006
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-38
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vziA01 | 2.20.28.100 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Desulphoferrodoxin, N-terminal domain | 0.74 | 60.0 | 6.01e-01 | 97.3% | 92.1% |
| 3d4rE01 | 2.40.128.400 | Mainly Beta › Beta Barrel › Lipocalin › | 0.68 | 49.0 | 3.84e-01 | 100.0% | 34.5% |
| 1pqzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 52.0 | 3.92e-01 | 89.2% | 83.2% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.67 | 53.0 | 5.04e-01 | 100.0% | 89.8% |
| 5xyib00 | 2.20.25.100 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 | 0.61 | 49.0 | 3.98e-01 | 100.0% | 62.2% |
| 2vl6A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.61 | 47.0 | 4.54e-01 | 100.0% | 100.0% |
| 7nitA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 3.25e-01 | 83.8% | 83.5% |
| 1yuzA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.60 | 45.0 | 4.55e-01 | 94.6% | 89.5% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.59 | 45.0 | 4.38e-01 | 97.3% | 100.0% |
| 1qxfA00 | 2.20.25.100 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 | 0.59 | 43.0 | 4.07e-01 | 100.0% | 84.5% |
| 2m4vA00 | 2.20.28.270 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase-binding protein A | 0.59 | 48.0 | 3.89e-01 | 100.0% | 50.0% |
| 1fvqA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 47.0 | 3.97e-01 | 100.0% | 97.2% |
| 2m6pA00 | 2.20.28.270 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase-binding protein A | 0.58 | 43.0 | 4.15e-01 | 91.9% | 87.0% |
| 5noiA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 3.35e-01 | 100.0% | 51.0% |
| 3zgzD04 | 2.20.28.290 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.55 | 42.0 | 3.81e-01 | 100.0% | 77.4% |
| 2xy1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.35e-01 | 100.0% | 55.7% |
| 3brkX01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 37.0 | 2.38e-01 | 97.3% | 21.5% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.02e-01 | 89.2% | 90.6% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 38.0 | 3.48e-01 | 100.0% | 88.7% |
| 2bbuA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 36.0 | 2.60e-01 | 91.9% | 66.0% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5044566 | 375.12.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related | 0.84 | 72.0 | 5.80e-01 | 97.3% | 51.4% |
| 5044292 | 375.11.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ | 0.77 | 62.0 | 5.28e-01 | 94.6% | 53.8% |
| 5022651 | 375.11.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ | 0.76 | 64.0 | 5.23e-01 | 97.3% | 51.4% |
| 4953501 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 63.0 | 6.18e-01 | 100.0% | 97.5% |
| 3809044 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 62.0 | 5.86e-01 | 97.3% | 84.4% |
| 4070010 | 375.1.2.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Desulforedoxin › Desulfoferrod_N | 0.73 | 59.0 | 5.86e-01 | 97.3% | 87.5% |
| 4103847 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.72 | 60.0 | 4.59e-01 | 100.0% | 40.0% |
| 4943704 | 375.12.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related | 0.72 | 57.0 | 4.86e-01 | 94.6% | 55.4% |
| 5070290 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.71 | 59.0 | 4.18e-01 | 100.0% | 29.6% |
| 4933617 | 375.11.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ › NAPRTase_C | 0.71 | 57.0 | 4.54e-01 | 97.3% | 44.3% |
| 4163860 | 375.1.1.199 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MJ0401 | 0.70 | 55.0 | 5.24e-01 | 91.9% | 100.0% |
| 4322207 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 52.0 | 5.30e-01 | 89.2% | 100.0% |
| 3257054 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.68 | 53.0 | 5.31e-01 | 97.3% | 97.5% |
| 3541580 | 375.1.1.78 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-3CxxC_2 | 0.67 | 53.0 | 4.48e-01 | 100.0% | 52.7% |
| 4349964 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.67 | 54.0 | 4.17e-01 | 100.0% | 38.9% |
| 4621617 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 52.0 | 4.90e-01 | 94.6% | 74.0% |
| 4927454 | 386.1.1.418 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-FPG_IleRS | 0.65 | 51.0 | 4.95e-01 | 94.6% | 100.0% |
| 5035387 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 52.0 | 5.33e-01 | 91.9% | 100.0% |
| 5015962 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.64 | 51.0 | 4.81e-01 | 100.0% | 94.0% |
| 3245312 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.63 | 48.0 | 4.94e-01 | 94.6% | 100.0% |
| 5016230 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.63 | 52.0 | 5.16e-01 | 100.0% | 92.5% |
| 5039411 | 375.1.1.12 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27e | 0.63 | 47.0 | 4.29e-01 | 100.0% | 78.1% |
| 4019034 | 375.1.1.22 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DNA_RNApol_7kD | 0.63 | 47.0 | 4.69e-01 | 94.6% | 85.0% |
| 4666101 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 48.0 | 4.70e-01 | 97.3% | 80.0% |
| 3235447 | 821.1.1.8 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › ANKLE2_3rd | 0.62 | 52.0 | 4.01e-01 | 100.0% | 43.3% |
| 4952915 | 375.2.1.0 ↗ | few secondary structure elements › Rubredoxin-like › YfgJ-like › YfgJ-like | 0.61 | 47.0 | 4.78e-01 | 91.9% | 97.1% |
| 4470805 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.60 | 46.0 | 2.88e-01 | 94.6% | 14.4% |
| 5027043 | 375.1.1.12 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27e | 0.59 | 44.0 | 4.30e-01 | 91.9% | 100.0% |
| 3933289 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 46.0 | 4.51e-01 | 100.0% | 82.2% |
| 5017094 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 42.0 | 3.95e-01 | 100.0% | 60.0% |
| 3291935 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 44.0 | 3.22e-01 | 100.0% | 38.6% |
| 5074538 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.57 | 43.0 | 3.95e-01 | 100.0% | 66.7% |
| 5034313 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 39.0 | 4.02e-01 | 86.5% | 94.3% |
| 4335061 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.54 | 41.0 | 3.95e-01 | 100.0% | 96.0% |
| 3462740 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.53 | 39.0 | 3.95e-01 | 97.3% | 92.5% |
| 3981090 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 40.0 | 3.69e-01 | 94.6% | 65.5% |
| 3299586 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 38.0 | 3.73e-01 | 100.0% | 74.0% |
| 3238041 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 41.0 | 4.13e-01 | 100.0% | 92.5% |
| 3531830 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.51 | 39.0 | 3.03e-01 | 97.3% | 46.4% |
| 3410731 | 2011.1.1.2 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M14,Pepdidase_M14_N | 0.50 | 37.0 | 2.21e-01 | 100.0% | 12.1% |