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UBF22728.1

Arc-Vir

MZ334522__UBF22728.1__HRTV-27-gp35__00035

Identity

Accession:
MZ334522 ↗
Protein ID:
UBF22728.1 ↗
Kingdom:
archaea

Quality

95.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thumleimavirales› Hafunaviridae› Minorvirus› Halorubrum_tailed_virus_27

TaxID: 2878008

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-83
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01432.27 best Peptidase_M3 31.8 1.40e-07 82.3% 14.7%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qr4A03 1.10.1370.20 Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › Oligoendopeptidase f, C-terminal domain 0.90 84.0 5.42e-01 100.0% 25.1%
3ce2A03 1.10.1370.20 Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › Oligoendopeptidase f, C-terminal domain 0.88 80.0 5.02e-01 98.7% 20.9%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.66 36.0 3.39e-01 89.9% 46.2%
4mtxD00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.64 35.0 3.31e-01 84.8% 45.3%
1hw1A02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.63 43.0 3.53e-01 70.9% 46.4%
2p11A02 1.10.286.50 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.63 44.0 4.55e-01 73.4% 97.3%
4ar9A02 1.10.390.20 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.61 48.0 4.02e-01 92.4% 48.6%
3udcA01 1.10.287.1260 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 42.0 3.74e-01 77.2% 55.7%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 36.0 3.39e-01 84.8% 54.2%
3g9gA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.54 46.0 3.32e-01 97.5% 77.6%
3f7cA00 1.20.1590.10 Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like 0.54 44.0 3.48e-01 97.5% 71.9%
3h38A02 1.10.3090.10 Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 0.54 39.0 2.77e-01 78.5% 41.1%
3tuiA00 1.10.3720.10 Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like 0.53 45.0 3.29e-01 92.4% 56.9%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.53 35.0 2.88e-01 75.9% 36.8%
6bs3B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 39.0 2.73e-01 84.8% 54.1%
4fqnC00 1.20.1160.20 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › 0.52 36.0 3.52e-01 70.9% 77.6%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 34.0 3.52e-01 79.7% 72.4%
6nmnA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.51 45.0 3.87e-01 100.0% 73.4%
2of7A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 38.0 3.16e-01 79.7% 57.1%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4031693 2498.1.1.7 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3,Peptidase_M3_N 0.96 92.0 5.28e-01 100.0% 13.4%
4593684 2498.1.1.6 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 0.91 84.0 4.88e-01 98.7% 13.6%
3994820 2498.1.1.6 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 0.81 65.0 4.85e-01 84.8% 38.4%
3673670 639.2.1.4 ↗ alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › Ovate 0.71 34.0 3.70e-01 86.1% 53.8%
3825757 101.35.1.23 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate 0.71 34.0 3.78e-01 86.1% 56.9%
3237399 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 46.0 3.41e-01 78.5% 60.5%
None — 0.61 48.0 2.76e-01 87.3% 20.2%
3593968 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.60 44.0 4.22e-01 77.2% 70.0%
2122153 3831.1.1.1 ↗ alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI 0.59 43.0 4.24e-01 77.2% 79.1%
4014288 509.1.1.0 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.59 42.0 4.26e-01 75.9% 97.5%
3985403 5041.1.1.0 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.58 41.0 4.09e-01 79.7% 72.5%
3283697 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.56 39.0 3.47e-01 72.2% 93.0%
3588371 148.1.3.278 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Bac_RepA_C 0.56 40.0 3.41e-01 74.7% 53.6%
3448391 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.55 37.0 3.58e-01 94.9% 61.1%
4933737 3567.1.1.192 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › EMC3_TMCO1 0.53 38.0 3.69e-01 78.5% 67.4%
4094168 547.1.1.1 ↗ alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer 0.53 39.0 3.61e-01 77.2% 81.0%
4095698 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.53 38.0 3.45e-01 78.5% 53.9%
3437911 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.53 38.0 3.25e-01 78.5% 46.2%
4354686 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.52 36.0 3.21e-01 73.4% 58.3%
3992377 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.52 37.0 4.01e-01 74.7% 100.0%
3694629 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.51 35.0 3.49e-01 84.8% 68.8%
3536875 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.51 37.0 2.58e-01 77.2% 45.3%
4591574 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.51 35.0 3.20e-01 79.7% 51.3%