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UBF22954.1

Arc-Vir

MZ334523__UBF22954.1__HVTV-2-gp147__00147

Identity

Accession:
MZ334523 ↗
Protein ID:
UBF22954.1 ↗
Kingdom:
archaea

Quality

72.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thumleimavirales› Druskaviridae› Tredecimvirus› Haloarcula_virus_HVTV-2

TaxID: 2877988

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-36
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pjzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 44.0 2.72e-01 75.0% 10.4%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 47.0 3.60e-01 77.8% 32.0%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.69 49.0 2.95e-01 80.6% 11.6%
1biqA00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.68 58.0 3.35e-01 97.2% 39.7%
6l2cB00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.66 52.0 2.98e-01 88.9% 49.4%
7dklA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 57.0 4.07e-01 100.0% 46.5%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 3.69e-01 80.6% 37.3%
1o7fA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 3.04e-01 83.3% 31.4%
1i27A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 3.53e-01 77.8% 45.2%
1fokA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 3.54e-01 83.3% 74.7%
2pokA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.60 45.0 2.73e-01 86.1% 11.8%
4uwmA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.58 51.0 2.88e-01 97.2% 14.9%
4inaA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 43.0 2.68e-01 80.6% 89.8%
1khvA04 6.10.140.320 Special › Helix non-globular › Helix Hairpins › 0.57 42.0 3.68e-01 77.8% 51.9%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.49e-01 83.3% 54.0%
1vpaA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 39.0 2.51e-01 91.7% 68.8%
4a17H02 3.30.60.300 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.52 36.0 3.50e-01 72.2% 92.3%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5082299 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 49.0 3.51e-01 91.7% 27.4%
4585740 101.11.1.0 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.71 49.0 3.60e-01 91.7% 28.9%
4018916 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.69 52.0 2.94e-01 83.3% 6.8%
3781664 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.67 50.0 3.17e-01 83.3% 81.0%
5058216 7524.1.1.2 ↗ a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh 0.66 51.0 3.11e-01 83.3% 33.8%
4992051 5069.1.3.1 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Sdh_cyt 0.63 49.0 3.25e-01 83.3% 55.9%
4980762 2003.1.1.386 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_C 0.63 46.0 2.59e-01 77.8% 77.3%
4968330 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 3.67e-01 94.4% 35.7%
5044949 241.9.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like 0.58 49.0 3.42e-01 97.2% 90.8%
4937327 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 3.94e-01 94.4% 80.0%
3285514 7516.1.1.1 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase 0.53 40.0 2.52e-01 100.0% 91.3%
3996571 101.1.2.53 ↗ alpha arrays › HTH › HTH › winged helix domain › Mnd1 0.53 38.0 3.58e-01 80.6% 62.0%
4975588 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 44.0 3.59e-01 91.7% 53.8%
4986386 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.53 43.0 2.91e-01 94.4% 37.2%
4997279 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.51 37.0 2.34e-01 86.1% 33.5%