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UBF23230.1
Arc-VirMZ334525__UBF23230.1__HATV-2-gp79__00079
Identity
- Accession:
- MZ334525 ↗
- Protein ID:
- UBF23230.1 ↗
- Kingdom:
- archaea
Quality
72.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Soleiviridae›
Eilatmyovirus›
Haloarcula_tailed_virus_2
TaxID: 2877989
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-137
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8cvmg01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.52 | 21.0 | 2.59e-01 | 98.3% | 55.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3234274 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.57 | 22.0 | 2.75e-01 | 100.0% | 52.9% |
| 5035557 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 19.0 | 2.75e-01 | 89.9% | 60.0% |
| 4947252 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 19.0 | 2.94e-01 | 86.6% | 75.6% |
| 4405359 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.51 | 26.0 | 3.16e-01 | 84.9% | 76.0% |
| 3704121 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.51 | 22.0 | 3.03e-01 | 89.1% | 81.0% |
| 3989970 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 26.0 | 3.38e-01 | 86.6% | 89.2% |
D2
high
residues 140-202_234-267
Domain cluster:
representative
D3
high
residues 292-349
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5g5gA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.64 | 54.0 | 4.73e-01 | 96.6% | 71.1% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 44.0 | 4.59e-01 | 75.9% | 80.8% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 52.0 | 4.36e-01 | 100.0% | 62.3% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 41.0 | 3.83e-01 | 70.7% | 53.3% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 51.0 | 4.15e-01 | 100.0% | 48.2% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.61 | 40.0 | 3.66e-01 | 70.7% | 51.3% |
| 1qrvA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.60 | 43.0 | 4.03e-01 | 75.9% | 86.3% |
| 6tqpA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.60 | 50.0 | 3.89e-01 | 94.8% | 43.4% |
| 3fr3B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 47.0 | 3.83e-01 | 91.4% | 49.6% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 40.0 | 3.83e-01 | 79.3% | 62.1% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 49.0 | 4.64e-01 | 100.0% | 91.8% |
| 2efjA01 | 1.10.1200.270 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Methyltransferase, alpha-helical capping domain | 0.58 | 48.0 | 3.73e-01 | 94.8% | 79.9% |
| 1pu6A01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.57 | 44.0 | 3.85e-01 | 87.9% | 85.1% |
| 4g1tA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 41.0 | 4.08e-01 | 87.9% | 73.8% |
| 7xcnM01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.56 | 45.0 | 4.18e-01 | 91.4% | 82.1% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.56 | 39.0 | 3.76e-01 | 72.4% | 67.2% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.56 | 38.0 | 3.68e-01 | 72.4% | 67.2% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.56 | 36.0 | 3.55e-01 | 70.7% | 59.4% |
| 2eplX02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 46.0 | 2.96e-01 | 98.3% | 18.8% |
| 1s4kA00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.54 | 44.0 | 3.60e-01 | 94.8% | 50.0% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 44.0 | 4.24e-01 | 96.6% | 82.9% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.53 | 38.0 | 3.39e-01 | 75.9% | 67.5% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4994576 | 101.35.1.36 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF27234 | 0.71 | 57.0 | 5.41e-01 | 89.7% | 79.7% |
| 5064744 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.70 | 58.0 | 4.24e-01 | 96.6% | 34.7% |
| 3210584 | 101.1.1.336 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Tri-helical | 0.69 | 57.0 | 5.17e-01 | 98.3% | 89.4% |
| 4279461 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.68 | 47.0 | 2.95e-01 | 72.4% | 31.5% |
| 3909751 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.67 | 56.0 | 5.32e-01 | 98.3% | 80.0% |
| 3447168 | 592.2.1.12 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › PF26051 | 0.63 | 55.0 | 4.87e-01 | 100.0% | 85.9% |
| 3523688 | 101.1.1.281 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF25981 | 0.62 | 51.0 | 5.10e-01 | 100.0% | 95.0% |
| 4960932 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.62 | 53.0 | 3.76e-01 | 100.0% | 74.7% |
| 4940290 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.61 | 52.0 | 3.47e-01 | 96.6% | 25.1% |
| 4114693 | 5041.1.1.28 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › PF26135 | 0.60 | 40.0 | 3.83e-01 | 70.7% | 57.1% |
| 4286866 | 620.1.1.6 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 | 0.60 | 42.0 | 3.08e-01 | 75.9% | 54.9% |
| 3236866 | 1135.1.1.3 ↗ | a+b complex topology › Immune Mapped Protein 2 (IMP2) › Immune Mapped Protein 2 (IMP2) › Immune Mapped Protein 2 (IMP2) › CytochromB561_N | 0.60 | 45.0 | 3.84e-01 | 81.0% | 54.7% |
| 143247 | 592.2.1.1 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › DUF1871 | 0.60 | 49.0 | 4.55e-01 | 100.0% | 79.3% |
| 3561510 | 601.4.1.63 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › TRC8_N | 0.60 | 51.0 | 4.14e-01 | 98.3% | 68.7% |
| 3963018 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.57 | 47.0 | 3.99e-01 | 100.0% | 73.4% |
| 3654814 | 592.1.1.9 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PF26051 | 0.56 | 45.0 | 4.09e-01 | 100.0% | 72.2% |
| 4015178 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.55 | 39.0 | 2.87e-01 | 81.0% | 27.7% |
| 4540906 | 101.1.4.82 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF3603 | 0.54 | 38.0 | 3.35e-01 | 75.9% | 59.6% |
| 4943605 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.54 | 44.0 | 3.04e-01 | 100.0% | 58.6% |
| 4545539 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.52 | 43.0 | 2.99e-01 | 98.3% | 93.5% |
| 4938673 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.50 | 37.0 | 3.62e-01 | 79.3% | 70.8% |
| 3291272 | 620.1.1.6 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 | 0.50 | 42.0 | 3.12e-01 | 93.1% | 57.3% |