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UBF23249.1

Arc-Vir

MZ334525__UBF23249.1__HATV-2-gp98__00098

Identity

Accession:
MZ334525 ↗
Protein ID:
UBF23249.1 ↗
Kingdom:
archaea

Quality

93.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-85
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w40A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 48.0 3.32e-01 78.5% 25.2%
1mdaH00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 47.0 2.99e-01 79.7% 19.3%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 46.0 3.90e-01 79.7% 74.8%
1cb8A03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.61 46.0 4.17e-01 82.3% 72.7%
1pguA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 46.0 3.10e-01 81.0% 24.2%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 45.0 3.02e-01 79.7% 23.5%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 47.0 2.92e-01 83.5% 21.2%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.59 35.0 2.78e-01 84.8% 29.3%
6fh1B01 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.59 47.0 3.37e-01 86.1% 100.0%
3s8zA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 48.0 3.20e-01 88.6% 71.5%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.59 46.0 3.36e-01 83.5% 50.5%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 41.0 3.85e-01 74.7% 74.7%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 41.0 3.71e-01 74.7% 61.1%
2dg1C00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 50.0 3.27e-01 93.7% 87.5%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 43.0 2.83e-01 79.7% 36.4%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 45.0 2.84e-01 84.8% 19.0%
3u1wA01 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 3.50e-01 88.6% 63.4%
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 38.0 3.61e-01 77.2% 59.6%
3s2kB01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 47.0 3.20e-01 93.7% 85.9%
3hjhA02 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.55 36.0 3.56e-01 88.6% 60.5%
5h4eA02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.55 47.0 4.10e-01 94.9% 62.2%
5f7uA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 47.0 3.46e-01 98.7% 92.5%
1npeA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 45.0 3.10e-01 89.9% 89.4%
7x36A01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 41.0 2.69e-01 79.7% 95.7%
3v0rA01 2.40.350.20 Mainly Beta › Beta Barrel › AOC barrel-like › 0.53 44.0 3.96e-01 96.2% 87.5%
5x7qA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.53 47.0 3.40e-01 98.7% 91.2%
1yuaA02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.53 36.0 4.04e-01 86.1% 94.8%
7xinA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 44.0 4.03e-01 94.9% 89.0%
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.53 47.0 4.10e-01 100.0% 80.7%
1qnaA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.52 39.0 3.77e-01 81.0% 97.8%
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 45.0 3.44e-01 96.2% 87.9%
2p1wA01 3.30.2430.10 Alpha Beta › 2-Layer Sandwich › Phosphothreonine lyase fold › phosphothreonine lyase 0.52 38.0 3.02e-01 86.1% 34.8%
6qm7J00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 44.0 3.31e-01 96.2% 82.8%
2fe0A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 40.0 3.62e-01 84.8% 87.9%
1bxgA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.51 37.0 3.17e-01 98.7% 45.2%
2bmxB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 45.0 3.52e-01 100.0% 62.8%
3f42A00 3.30.1310.10 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain 0.51 37.0 3.56e-01 77.2% 82.8%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.51 41.0 3.41e-01 88.6% 65.2%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.50 35.0 3.23e-01 72.2% 74.0%
3fnrA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 41.0 2.75e-01 100.0% 23.0%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3800251 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 36.0 3.76e-01 70.9% 52.0%
4405609 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.66 42.0 4.09e-01 89.9% 57.8%
3500002 5.1.3.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.64 49.0 3.25e-01 79.7% 70.2%
3229434 5.1.3.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.64 49.0 3.21e-01 79.7% 68.4%
4868007 5.1.2.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › NHL 0.64 49.0 3.33e-01 79.7% 28.3%
3740435 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.64 50.0 3.25e-01 83.5% 41.2%
3682683 5.1.3.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.63 48.0 3.31e-01 79.7% 34.4%
3801408 5.1.4.39 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.63 52.0 3.21e-01 88.6% 29.4%
3790399 5.1.5.10 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › ANAPC4_WD40 0.63 52.0 3.16e-01 88.6% 30.8%
3399942 9.1.1.49 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 0.63 52.0 4.53e-01 89.9% 90.0%
3338958 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 44.0 3.00e-01 73.4% 78.5%
2229 5.1.4.25 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Me-amine-dh_H 0.62 47.0 2.99e-01 79.7% 19.3%
3930104 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 47.0 3.20e-01 79.7% 39.3%
None 0.62 47.0 3.15e-01 79.7% 57.2%
5083421 2484.1.1.6 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N 0.62 45.0 4.36e-01 78.5% 71.1%
3937996 5.1.3.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.61 49.0 3.28e-01 84.8% 73.7%
3414341 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.61 46.0 3.14e-01 79.7% 44.5%
5010183 5.1.3.278 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29948 0.61 46.0 3.01e-01 79.7% 39.1%
4147983 5.1.4.126 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Striatin 0.60 49.0 3.16e-01 88.6% 22.3%
3672647 5.1.4.297 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.60 48.0 2.99e-01 86.1% 66.7%
5038597 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 45.0 3.09e-01 79.7% 75.8%
3407232 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.60 45.0 3.09e-01 79.7% 27.2%
3419955 5.1.3.207 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40, NBCH_WD40 0.60 51.0 3.26e-01 91.1% 33.1%
3244937 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 47.0 3.19e-01 83.5% 40.7%
3436556 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.60 46.0 4.77e-01 82.3% 90.7%
3809547 5.1.4.297 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.60 48.0 3.08e-01 86.1% 76.1%
3878046 5.1.3.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.59 47.0 3.14e-01 86.1% 48.4%
4664499 5.1.3.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.59 45.0 3.08e-01 82.3% 30.4%
3782145 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.59 45.0 4.29e-01 82.3% 81.1%
3264242 5.1.4.297 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.59 50.0 3.18e-01 91.1% 21.3%
3447974 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.59 50.0 4.22e-01 94.9% 97.0%
3953047 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 3.22e-01 89.9% 65.5%
4015830 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 47.0 2.91e-01 88.6% 31.5%
3780929 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.58 46.0 3.13e-01 83.5% 43.4%
3536311 5.1.3.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.58 50.0 3.46e-01 93.7% 50.2%
3579502 220.1.1.46 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.58 44.0 3.60e-01 81.0% 77.2%
3417431 5.1.4.297 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.58 49.0 3.07e-01 92.4% 19.1%
3226417 5.1.3.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.58 49.0 3.23e-01 91.1% 76.4%
3888630 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.58 45.0 3.41e-01 82.3% 41.1%
4856681 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.58 45.0 3.86e-01 83.5% 77.6%
3586554 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 43.0 3.84e-01 78.5% 75.5%
4489808 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.57 37.0 3.62e-01 83.5% 60.0%
3254908 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 47.0 3.13e-01 88.6% 63.5%
3283531 5.1.3.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.57 50.0 3.43e-01 93.7% 94.9%
4956008 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.57 50.0 3.23e-01 96.2% 91.8%
3962065 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 41.0 2.87e-01 75.9% 42.0%
3960750 6.1.1.0 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.57 44.0 3.87e-01 83.5% 64.4%
3846124 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 47.0 3.17e-01 92.4% 86.8%
3933565 5.1.4.229 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N 0.56 45.0 2.85e-01 84.8% 17.9%
3824752 5.3.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop 0.56 48.0 4.11e-01 94.9% 96.2%
3227816 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.56 49.0 3.51e-01 100.0% 88.2%
3606318 897.1.1.0 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 0.56 45.0 3.27e-01 87.3% 50.9%
3743741 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.55 43.0 4.26e-01 83.5% 80.0%
3338200 239.3.1.0 beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain 0.55 48.0 3.90e-01 98.7% 78.7%
3647885 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.55 45.0 2.94e-01 86.1% 84.4%
5066585 881.2.1.0 a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like 0.55 38.0 3.26e-01 83.5% 43.8%
3704327 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.55 37.0 3.95e-01 89.9% 78.6%
3722745 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.55 43.0 4.29e-01 83.5% 86.3%
2067658 5.1.3.145 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b, DUF5050 0.55 45.0 3.13e-01 89.9% 87.0%
3925876 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.55 45.0 3.13e-01 89.9% 88.1%
4057882 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.54 44.0 4.11e-01 91.1% 89.0%
4027842 5.1.3.117 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.54 42.0 2.75e-01 83.5% 22.1%
3536979 5.1.3.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.54 48.0 3.28e-01 100.0% 98.6%
2082647 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.54 43.0 3.10e-01 88.6% 92.7%
3175538 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.54 41.0 2.58e-01 82.3% 15.9%
4994722 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.53 46.0 2.93e-01 93.7% 49.3%
5003276 331.1.1.5 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.53 34.0 3.67e-01 97.5% 80.0%
5044321 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.53 47.0 3.42e-01 100.0% 87.7%
2487568 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.52 46.0 4.07e-01 100.0% 81.4%
4243623 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.52 46.0 3.46e-01 100.0% 96.0%
3079243 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.52 40.0 3.99e-01 86.1% 83.5%
1373 10.15.1.1 beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 0.52 41.0 3.47e-01 86.1% 72.5%
3997090 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.51 45.0 4.04e-01 100.0% 83.5%
5035872 12.3.1.13 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.51 43.0 3.00e-01 97.5% 93.0%
3703122 10.15.1.1 beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 0.50 40.0 3.58e-01 88.6% 85.2%