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UBF23307.1
Arc-VirMZ334526__UBF23307.1__HRTV-29-gp29__00029
Identity
- Accession:
- MZ334526 ↗
- Protein ID:
- UBF23307.1 ↗
- Kingdom:
- archaea
Quality
78.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Kirjokansivirales›
Haloferuviridae›
Dpdavirus›
Halorubrum_tailed_virus_29
TaxID: 2878010
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-61
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.78 | 56.0 | 5.12e-01 | 75.5% | 63.2% |
| 1knzA01 | 6.10.280.20 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rotavirus non-structural protein NSP3, N-terminal domain | 0.76 | 53.0 | 4.20e-01 | 71.7% | 39.2% |
| 1is8A01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.75 | 54.0 | 5.26e-01 | 77.4% | 75.0% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.75 | 53.0 | 4.73e-01 | 73.6% | 54.8% |
| 2w43A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.74 | 50.0 | 4.94e-01 | 71.7% | 68.4% |
| 4uqfG01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.72 | 53.0 | 5.34e-01 | 77.4% | 80.8% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.71 | 55.0 | 5.21e-01 | 86.8% | 76.6% |
| 4jd9G00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.71 | 50.0 | 3.77e-01 | 75.5% | 32.5% |
| 1gakA00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.71 | 57.0 | 4.20e-01 | 88.7% | 64.2% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.70 | 50.0 | 5.26e-01 | 75.5% | 95.6% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.70 | 56.0 | 4.34e-01 | 86.8% | 72.3% |
| 3o60A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 54.0 | 3.71e-01 | 84.9% | 29.7% |
| 1sv0D00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.70 | 54.0 | 4.70e-01 | 84.9% | 74.1% |
| 3dboB00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.69 | 54.0 | 4.06e-01 | 84.9% | 46.0% |
| 3f1xA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.69 | 55.0 | 4.05e-01 | 90.6% | 64.4% |
| 4hzuS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.69 | 56.0 | 3.96e-01 | 90.6% | 59.1% |
| 1sxjA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 50.0 | 4.53e-01 | 81.1% | 58.3% |
| 1v1gA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.66 | 54.0 | 3.69e-01 | 90.6% | 33.0% |
| 2euiA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 56.0 | 4.20e-01 | 100.0% | 92.9% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.65 | 46.0 | 3.82e-01 | 81.1% | 41.4% |
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.64 | 43.0 | 4.31e-01 | 77.4% | 69.8% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 47.0 | 4.51e-01 | 84.9% | 66.1% |
| 6fijA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.63 | 52.0 | 3.23e-01 | 92.5% | 61.1% |
| 1ni5A02 | 1.20.59.20 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › | 0.61 | 48.0 | 4.17e-01 | 88.7% | 67.4% |
| 3k59A07 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.58 | 45.0 | 3.32e-01 | 84.9% | 33.8% |
| 1ad6A00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 45.0 | 3.30e-01 | 98.1% | 76.8% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 47.0 | 3.77e-01 | 94.3% | 82.9% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 39.0 | 3.74e-01 | 77.4% | 88.7% |
| 3k1rA01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.52 | 42.0 | 3.74e-01 | 96.2% | 100.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3209229 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.84 | 57.0 | 3.58e-01 | 71.7% | 15.4% |
| 3962576 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.79 | 55.0 | 4.73e-01 | 73.6% | 48.2% |
| 4994798 | 3646.1.1.0 ↗ | alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters | 0.78 | 53.0 | 3.52e-01 | 71.7% | 19.5% |
| 2776079 | 3787.1.1.0 ↗ | alpha bundles › HAD superfamily helical bundle insertion domain | 0.76 | 53.0 | 5.25e-01 | 73.6% | 70.2% |
| 3831795 | 589.1.2.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C | 0.76 | 53.0 | 3.55e-01 | 73.6% | 19.5% |
| 3643488 | 192.15.1.11 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CemA | 0.75 | 54.0 | 4.84e-01 | 77.4% | 56.0% |
| 3436965 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.75 | 51.0 | 4.23e-01 | 71.7% | 44.2% |
| 4341780 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.74 | 59.0 | 5.53e-01 | 88.7% | 70.8% |
| 169693 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.74 | 51.0 | 3.38e-01 | 71.7% | 18.9% |
| None | — | 0.74 | 52.0 | 3.44e-01 | 73.6% | 19.0% | |
| 4669270 | 6026.1.1.42 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › CemA | 0.74 | 52.0 | 4.49e-01 | 77.4% | 47.1% |
| 3270778 | 108.1.1.96 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 | 0.74 | 52.0 | 4.25e-01 | 75.5% | 40.0% |
| 4982784 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.74 | 53.0 | 5.13e-01 | 79.2% | 68.3% |
| 3343513 | 192.8.1.268 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CemA | 0.73 | 52.0 | 4.16e-01 | 77.4% | 38.5% |
| 5060609 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.71 | 49.0 | 4.36e-01 | 71.7% | 53.3% |
| 5012602 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.70 | 52.0 | 4.03e-01 | 81.1% | 45.8% |
| 3198609 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.69 | 50.0 | 3.15e-01 | 77.4% | 14.9% |
| 4530108 | 3711.1.1.59 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › CemA | 0.69 | 53.0 | 4.28e-01 | 84.9% | 43.4% |
| 4993218 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.67 | 52.0 | 3.90e-01 | 84.9% | 41.5% |
| 3643664 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.66 | 50.0 | 4.45e-01 | 84.9% | 57.3% |
| 5064195 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.65 | 52.0 | 3.76e-01 | 88.7% | 63.7% |
| 4373204 | 3826.1.1.85 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Ycf1 | 0.64 | 49.0 | 3.70e-01 | 81.1% | 60.0% |
| 4193124 | 148.1.3.373 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Ycf1 | 0.64 | 48.0 | 3.84e-01 | 81.1% | 68.2% |
| 3768875 | 150.1.1.122 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › CECR6_TMEM121 | 0.59 | 50.0 | 3.30e-01 | 100.0% | 67.5% |
| 4019120 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 49.0 | 2.79e-01 | 96.2% | 48.0% |
| 4291557 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.58 | 47.0 | 3.45e-01 | 100.0% | 31.2% |
| 3724838 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.55 | 44.0 | 4.10e-01 | 88.7% | 92.9% |
| 3726873 | 601.1.2.108 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PigN | 0.54 | 44.0 | 3.02e-01 | 88.7% | 43.3% |
| 3592587 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.52 | 38.0 | 2.79e-01 | 77.4% | 80.0% |