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UBF23335.1
Arc-VirMZ334526__UBF23335.1__HRTV-29-gp57__00057
Identity
- Accession:
- MZ334526 ↗
- Protein ID:
- UBF23335.1 ↗
- Kingdom:
- archaea
Quality
84.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Kirjokansivirales›
Haloferuviridae›
Dpdavirus›
Halorubrum_tailed_virus_29
TaxID: 2878010
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-39
Domain cluster:
representative
D2
medium
residues 47-83
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lvhA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.78 | 63.0 | 6.08e-01 | 100.0% | 84.4% |
| 5vmzA03 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.75 | 62.0 | 6.17e-01 | 100.0% | 95.0% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 47.0 | 3.50e-01 | 70.3% | 27.5% |
| 3htkC02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.68 | 58.0 | 5.19e-01 | 100.0% | 81.5% |
| 2x3mA00 | 1.25.40.670 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 45.0 | 3.08e-01 | 83.8% | 31.3% |
| 4yjmC00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.61 | 45.0 | 3.72e-01 | 89.2% | 45.8% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.60 | 48.0 | 4.04e-01 | 100.0% | 68.4% |
| 6ioyC02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 37.0 | 2.45e-01 | 75.7% | 74.1% |
| 6z01B01 | 1.10.10.41 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Yeast DNA topoisomerase - domain 1 | 0.54 | 37.0 | 3.23e-01 | 86.5% | 78.2% |
| 1qu3A03 | 1.10.10.830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ile-tRNA synthetase CP2 domain-like | 0.51 | 35.0 | 3.23e-01 | 73.0% | 57.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4024190 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.84 | 67.0 | 6.38e-01 | 91.9% | 77.8% |
| 3750234 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.83 | 71.0 | 6.73e-01 | 100.0% | 84.4% |
| 3246204 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.82 | 72.0 | 7.08e-01 | 97.3% | 100.0% |
| 3213612 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.81 | 66.0 | 6.53e-01 | 91.9% | 95.0% |
| 3798430 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.80 | 65.0 | 5.99e-01 | 100.0% | 70.0% |
| 222312 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.78 | 63.0 | 6.08e-01 | 100.0% | 84.4% |
| 3687321 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.78 | 64.0 | 6.29e-01 | 97.3% | 95.0% |
| 3208982 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.75 | 62.0 | 5.93e-01 | 97.3% | 91.1% |
| 3686534 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 58.0 | 5.65e-01 | 100.0% | 95.6% |
| 5018179 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 54.0 | 4.70e-01 | 89.2% | 67.7% |
| 3597691 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.68 | 56.0 | 5.16e-01 | 100.0% | 100.0% |
| 4156281 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.67 | 49.0 | 3.01e-01 | 89.2% | 38.6% |
| 4044190 | 308.1.1.2 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related › ClpS | 0.65 | 48.0 | 3.77e-01 | 89.2% | 38.9% |
| 3687429 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 38.0 | 2.43e-01 | 100.0% | 94.3% |