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UBF23376.1

Arc-Vir

MZ334527__UBF23376.1__HATV-3-gp26__00026

Identity

Accession:
MZ334527 ↗
Protein ID:
UBF23376.1 ↗
Kingdom:
archaea

Quality

79.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-41
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.74 59.0 3.82e-01 89.2% 44.0%
3k30A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.72 56.0 3.85e-01 86.5% 62.4%
1uqwA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.71 54.0 3.90e-01 86.5% 50.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 54.0 4.34e-01 83.8% 53.4%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 4.28e-01 83.8% 70.8%
3facA00 2.170.150.70 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › 0.69 54.0 4.01e-01 94.6% 35.8%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 54.0 4.97e-01 91.9% 78.8%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 52.0 4.67e-01 83.8% 83.0%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.68 55.0 4.88e-01 91.9% 79.6%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 49.0 4.54e-01 83.8% 82.4%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 4.64e-01 91.9% 76.8%
1twfI02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.66 55.0 4.51e-01 100.0% 64.5%
4qfkA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.66 54.0 3.96e-01 97.3% 48.7%
5yhgA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.66 53.0 3.25e-01 97.3% 21.4%
2b5uA03 3.10.380.10 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain 0.65 50.0 3.95e-01 100.0% 43.9%
4czuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 56.0 4.20e-01 100.0% 92.4%
4wh5A00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.64 50.0 3.39e-01 89.2% 20.9%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 47.0 3.54e-01 83.8% 41.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.64 48.0 4.57e-01 86.5% 87.0%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 46.0 4.37e-01 83.8% 89.4%
4redB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 53.0 4.17e-01 100.0% 100.0%
5g56A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 50.0 3.63e-01 100.0% 75.0%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 46.0 3.68e-01 83.8% 51.2%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 45.0 3.90e-01 81.1% 82.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 45.0 3.98e-01 83.8% 83.1%
1f1sA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.60 48.0 3.87e-01 97.3% 61.0%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 43.0 3.67e-01 83.8% 70.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 42.0 3.83e-01 83.8% 83.1%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 39.0 3.57e-01 83.8% 79.0%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 41.0 3.66e-01 83.8% 86.2%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 35.0 3.20e-01 75.7% 51.7%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5052539 4294.1.1.0 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.77 68.0 5.36e-01 100.0% 57.3%
4937515 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.72 51.0 3.90e-01 78.4% 33.3%
4022266 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.71 53.0 3.36e-01 83.8% 16.1%
5035450 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 52.0 3.93e-01 83.8% 34.7%
3241793 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 51.0 3.76e-01 83.8% 38.1%
3612587 4357.1.1.0 beta barrels › WWE domain › WWE domain › WWE domain 0.67 49.0 4.42e-01 89.2% 53.3%
4269256 4.1.1.245 beta barrels › SH3 › SH3 › SH3 › SspH 0.65 48.0 4.23e-01 83.8% 58.3%
4013690 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.64 50.0 4.49e-01 86.5% 61.8%
3881111 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 49.0 3.84e-01 91.9% 46.7%
3494671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 40.0 3.83e-01 78.4% 64.4%
D2 medium residues 51-147_159-179
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12708.13 best Pect-lyase_RHGA_epim 45.8 9.20e-12 90.7% 34.3%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pygA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 69.0 4.73e-01 96.6% 32.4%
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 68.0 5.37e-01 97.5% 58.0%
3jurA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 69.0 4.53e-01 100.0% 38.7%
3zppA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.73 67.0 4.45e-01 97.5% 31.8%
3gq8A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.73 68.0 4.41e-01 99.2% 25.9%
1h80B00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.72 67.0 4.46e-01 100.0% 27.9%
3eqnA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.71 66.0 4.52e-01 99.2% 31.8%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.71 66.0 4.53e-01 98.3% 33.1%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.71 64.0 4.07e-01 98.3% 22.1%
1rmgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.69 64.0 4.28e-01 100.0% 28.0%
5c1cA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.63 57.0 4.21e-01 100.0% 39.1%
2r6fA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 38.0 3.31e-01 100.0% 41.8%
1ydhA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 36.0 3.17e-01 99.2% 43.5%
1w5sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 37.0 3.25e-01 75.4% 74.2%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3294947 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.77 72.0 4.82e-01 100.0% 34.2%
3422718 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.77 72.0 4.79e-01 100.0% 34.8%
4104747 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.76 72.0 4.77e-01 100.0% 39.0%
3368264 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.76 72.0 4.67e-01 100.0% 32.2%
3307314 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.76 72.0 4.69e-01 100.0% 32.8%
3670547 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.76 71.0 4.87e-01 99.2% 35.3%
3674708 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.75 70.0 4.79e-01 100.0% 33.9%
3346616 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.75 70.0 4.75e-01 100.0% 34.9%
5082245 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.75 70.0 4.52e-01 100.0% 32.4%
2546335 207.2.1.32 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › CatAgl_D2 0.74 69.0 4.65e-01 99.2% 29.9%
3648137 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.74 69.0 4.74e-01 100.0% 34.9%
3192322 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.73 68.0 4.67e-01 100.0% 38.8%
3820891 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.73 68.0 4.65e-01 100.0% 33.8%
3814525 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.73 68.0 4.62e-01 100.0% 33.3%
3373292 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.72 67.0 4.79e-01 100.0% 41.5%
3191775 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.72 67.0 4.00e-01 100.0% 15.5%
3987209 207.2.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3,Beta_helix 0.72 68.0 4.38e-01 100.0% 29.1%
397790 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.72 67.0 4.41e-01 100.0% 26.9%
4383909 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.71 63.0 4.38e-01 95.8% 33.9%
4980489 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.71 55.0 3.25e-01 100.0% 11.8%
4856184 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.71 66.0 4.57e-01 100.0% 33.7%
3307012 207.2.2.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › beta-helix domain of fiber adhesin › Glyco_hydro_28 0.71 66.0 5.92e-01 100.0% 80.6%
3195366 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.70 66.0 4.46e-01 100.0% 31.0%
4424225 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.70 65.0 4.30e-01 100.0% 27.3%
5034576 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.70 55.0 4.19e-01 100.0% 38.4%
4079489 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.70 65.0 4.33e-01 100.0% 27.7%
4522677 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.70 65.0 4.31e-01 100.0% 27.7%
5032796 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.70 51.0 3.91e-01 98.3% 35.3%
4961992 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.70 64.0 4.30e-01 100.0% 33.9%
4539832 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.69 62.0 4.48e-01 95.8% 37.1%
4981827 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.69 57.0 4.57e-01 100.0% 48.6%
4034497 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.68 62.0 4.25e-01 97.5% 31.2%
3678167 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.63 59.0 4.19e-01 100.0% 37.8%
4980561 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.63 55.0 3.77e-01 99.2% 29.5%
1841000 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.62 39.0 4.80e-01 76.3% 100.0%
3592449 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.62 56.0 4.18e-01 100.0% 42.7%
1714446 207.2.1.66 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › WcaM 0.60 55.0 3.59e-01 97.5% 28.9%
4946253 2487.1.1.0 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.56 41.0 3.65e-01 100.0% 52.9%
2036144 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.56 50.0 3.76e-01 99.2% 62.8%
3936700 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.53 41.0 3.58e-01 83.1% 87.4%
4981294 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.53 49.0 4.26e-01 100.0% 84.0%
3819306 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.53 42.0 3.68e-01 84.7% 100.0%
4015700 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 42.0 3.61e-01 84.7% 94.7%
5035023 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.53 49.0 3.65e-01 100.0% 43.2%
4503293 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.52 41.0 2.88e-01 85.6% 44.7%
4982779 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.52 38.0 3.27e-01 76.3% 69.7%
4927683 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.51 38.0 3.11e-01 77.1% 55.6%
4426658 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.51 44.0 3.82e-01 95.8% 99.5%
3931555 2004.1.1.56 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.50 42.0 3.61e-01 100.0% 56.3%
5073927 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.50 36.0 3.17e-01 76.3% 60.5%
D3 medium residues 148-158_180-230
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gq8A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.91 84.0 4.89e-01 100.0% 24.1%
2pygA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.90 83.0 4.97e-01 100.0% 22.7%
1ee6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.87 79.0 5.42e-01 100.0% 37.1%
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.86 78.0 5.21e-01 100.0% 46.0%
1idjA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.86 79.0 4.76e-01 100.0% 27.0%
3zppA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.85 77.0 4.58e-01 100.0% 27.8%
4hwvB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.84 76.0 4.44e-01 100.0% 24.0%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.74 68.0 5.75e-01 100.0% 68.0%
3nb2A01 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.67 58.0 4.22e-01 100.0% 36.7%
4hq1A01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.63 52.0 3.45e-01 100.0% 26.2%
5irnA02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.60 48.0 4.37e-01 96.8% 93.5%
1gu7A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 44.0 3.32e-01 95.2% 70.2%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4969187 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.95 90.0 5.83e-01 100.0% 37.0%
4981818 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.94 89.0 5.47e-01 100.0% 24.9%
5068647 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.94 89.0 5.63e-01 100.0% 28.5%
4982113 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.94 89.0 5.68e-01 100.0% 33.9%
4981810 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.94 89.0 5.86e-01 100.0% 34.4%
5060097 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.94 88.0 5.30e-01 100.0% 23.4%
4968215 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.93 86.0 5.47e-01 100.0% 30.6%
4970153 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.92 86.0 4.75e-01 100.0% 10.4%
4931622 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.92 86.0 5.22e-01 100.0% 25.2%
4969216 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.92 86.0 5.33e-01 100.0% 28.1%
5034985 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.91 85.0 5.81e-01 100.0% 40.0%
5050079 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.91 85.0 5.53e-01 100.0% 32.3%
5072593 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.91 84.0 4.83e-01 100.0% 16.9%
5060991 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.90 84.0 5.05e-01 100.0% 21.7%
4968174 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.90 83.0 5.00e-01 100.0% 19.5%
4944416 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.89 83.0 4.85e-01 100.0% 24.2%
3965473 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.88 82.0 5.34e-01 100.0% 34.9%
3708824 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.85 77.0 4.84e-01 100.0% 26.1%
3702152 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.83 75.0 4.88e-01 100.0% 67.5%
3248661 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.76 70.0 4.71e-01 100.0% 31.6%
3199689 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.73 66.0 5.59e-01 100.0% 66.0%
1630684 207.9.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide 0.69 60.0 4.31e-01 100.0% 35.3%
3355383 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.67 59.0 3.79e-01 100.0% 35.5%
4378528 207.14.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.66 52.0 4.49e-01 100.0% 55.0%
3629898 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.62 52.0 4.97e-01 95.2% 93.2%
D4 medium residues 231-329
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13229.13 best Beta_helix 27.9 2.30e-06 93.9% 38.0%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6kqsA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.90 86.0 5.43e-01 100.0% 33.6%
3zppA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.85 80.0 5.08e-01 100.0% 27.8%
4nk6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 77.0 4.88e-01 100.0% 23.3%
1ee6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 64.0 5.03e-01 100.0% 42.6%
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.80 76.0 4.60e-01 100.0% 21.6%
2uvfB02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 74.0 4.69e-01 100.0% 22.4%
7o79A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 74.0 4.76e-01 100.0% 32.4%
1dbgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 72.0 4.53e-01 100.0% 22.0%
1rmgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 67.0 4.38e-01 100.0% 25.6%
5gkdA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 69.0 4.83e-01 100.0% 36.5%
2bm5B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.73 51.0 4.16e-01 100.0% 39.4%
3bh7B01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.73 49.0 3.93e-01 100.0% 35.8%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.71 49.0 4.17e-01 100.0% 44.6%
2xt2B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.69 48.0 3.86e-01 100.0% 37.1%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.68 48.0 4.12e-01 100.0% 46.5%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.68 49.0 4.96e-01 100.0% 76.3%
4hq1A01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.64 49.0 3.57e-01 100.0% 27.5%
1yy9A03 3.80.20.20 Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain 0.63 56.0 4.68e-01 100.0% 59.9%
2w7zA00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.62 54.0 4.13e-01 100.0% 44.0%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.62 51.0 4.38e-01 100.0% 56.3%
1hf2A02 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.61 44.0 4.36e-01 100.0% 71.7%
4kh3A00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.60 51.0 3.18e-01 100.0% 18.1%
2xtwD00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.57 52.0 4.07e-01 100.0% 50.0%
2qyuA01 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.56 51.0 4.36e-01 100.0% 75.8%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5034346 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.93 77.0 5.08e-01 100.0% 24.8%
5060097 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.93 76.0 4.99e-01 100.0% 24.0%
4980411 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.93 73.0 4.95e-01 100.0% 26.7%
5034020 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.93 74.0 5.28e-01 100.0% 32.2%
4969196 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.93 75.0 4.87e-01 100.0% 22.4%
5050079 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.92 72.0 5.24e-01 100.0% 34.0%
5021442 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.92 68.0 5.26e-01 100.0% 39.5%
5069339 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.92 69.0 4.72e-01 100.0% 26.1%
4944811 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.92 73.0 5.50e-01 100.0% 39.5%
5044621 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.92 72.0 4.83e-01 100.0% 24.9%
4981077 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.91 72.0 5.05e-01 100.0% 30.8%
4944589 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.90 73.0 5.37e-01 100.0% 36.5%
3502757 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.89 70.0 4.42e-01 100.0% 18.8%
5035023 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.88 72.0 4.96e-01 100.0% 29.5%
4942768 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.87 72.0 5.60e-01 100.0% 44.7%
5081172 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.84 71.0 5.22e-01 100.0% 38.7%
3302690 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.82 76.0 5.61e-01 100.0% 43.3%
3587303 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.82 76.0 4.84e-01 100.0% 22.7%
3828319 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.81 76.0 4.79e-01 100.0% 29.5%
4554798 207.2.1.9 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase 0.81 65.0 5.02e-01 100.0% 40.0%
4003464 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.81 75.0 4.97e-01 100.0% 28.0%
3804144 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.80 75.0 4.73e-01 100.0% 25.3%
3921234 207.2.1.70 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix 0.79 76.0 5.02e-01 100.0% 31.2%
3273051 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.79 73.0 5.21e-01 100.0% 38.9%
3251267 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.78 69.0 4.52e-01 100.0% 24.4%
3286791 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.75 54.0 5.22e-01 100.0% 67.3%
3575994 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.72 50.0 5.63e-01 97.0% 93.3%
3275349 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.70 65.0 4.22e-01 100.0% 24.8%
3263729 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.70 62.0 4.26e-01 100.0% 29.2%
4025775 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.69 45.0 4.30e-01 100.0% 57.4%
3997590 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.67 41.0 4.87e-01 94.9% 100.0%
3335252 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.66 60.0 4.79e-01 100.0% 60.5%
4969675 207.7.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Alpha subunit of glutamate synthase-C › Alpha subunit of glutamate synthase-C › GXGXG 0.66 45.0 3.52e-01 100.0% 32.1%
134728 207.9.1.6 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 0.62 54.0 4.13e-01 100.0% 44.0%
3621708 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.62 53.0 4.32e-01 100.0% 51.1%
3492291 207.4.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.62 52.0 4.34e-01 100.0% 54.6%
4378528 207.14.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.60 43.0 4.33e-01 100.0% 74.0%
2516583 207.14.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.59 44.0 4.61e-01 100.0% 86.7%
3634350 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.59 49.0 4.09e-01 100.0% 53.0%
3383785 207.1.1.99 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 0.57 52.0 3.42e-01 100.0% 24.4%
3855439 207.8.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD 0.54 47.0 3.45e-01 100.0% 35.8%
D5 medium residues 330-480_507-532
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13229.13 best Beta_helix 36.3 5.70e-09 87.0% 72.8%
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6kqsA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.81 77.0 5.66e-01 100.0% 68.6%
3gq8A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 76.0 5.42e-01 100.0% 40.9%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 74.0 5.72e-01 100.0% 56.9%
2vjiA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 74.0 5.40e-01 100.0% 52.9%
2pygA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 75.0 5.65e-01 100.0% 47.6%
3vsvA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.77 74.0 5.12e-01 100.0% 40.8%
2inuA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.77 72.0 5.34e-01 100.0% 43.4%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 73.0 5.08e-01 100.0% 35.6%
4nk6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 73.0 5.32e-01 100.0% 48.3%
5z9tA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 71.0 5.06e-01 100.0% 51.9%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.75 72.0 4.91e-01 100.0% 34.1%
5olpA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 70.0 5.14e-01 100.0% 46.3%
1bheA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 71.0 5.36e-01 100.0% 55.9%
3vmvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 70.0 5.62e-01 100.0% 72.5%
3n6zA01 2.160.20.110 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.74 69.0 5.95e-01 100.0% 79.6%
1ee6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.73 65.0 6.28e-01 100.0% 83.8%
2xt2B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.71 53.0 5.17e-01 100.0% 70.6%
3b4nA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 64.0 5.86e-01 100.0% 75.7%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.70 39.0 5.19e-01 72.9% 100.0%
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 65.0 5.98e-01 100.0% 85.0%
2w7zA00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.70 51.0 4.82e-01 100.0% 63.8%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.69 50.0 5.26e-01 100.0% 82.3%
4pmhA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.68 64.0 4.97e-01 100.0% 57.1%
2bm5B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.67 50.0 5.02e-01 100.0% 75.0%
1gq8A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.67 62.0 5.07e-01 100.0% 57.9%
3bh7B01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 54.0 5.30e-01 100.0% 77.7%
2f3lA00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.66 48.0 5.47e-01 94.4% 99.2%
1qjvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.66 62.0 4.92e-01 100.0% 82.7%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.65 52.0 5.51e-01 100.0% 94.3%
3syjA02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.63 58.0 3.95e-01 100.0% 43.7%
3nb2A01 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.62 52.0 5.29e-01 100.0% 89.3%
1igrA01 3.80.20.20 Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain 0.61 54.0 5.34e-01 93.8% 91.8%
3ak5D02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.59 55.0 3.64e-01 100.0% 39.8%
4kh3A00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.57 52.0 3.74e-01 97.7% 35.0%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5032606 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.88 72.0 5.49e-01 100.0% 41.9%
4977972 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.87 72.0 6.22e-01 100.0% 58.8%
5034985 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.87 71.0 6.89e-01 100.0% 77.4%
5034986 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.87 71.0 6.65e-01 100.0% 71.7%
5022134 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.85 73.0 5.85e-01 100.0% 50.0%
4980561 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.85 73.0 5.57e-01 100.0% 42.4%
5049754 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.85 72.0 5.83e-01 100.0% 51.0%
4980411 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.85 71.0 5.76e-01 100.0% 50.7%
5059872 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.85 70.0 5.27e-01 100.0% 39.5%
4969388 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.85 71.0 5.43e-01 100.0% 43.4%
3905958 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.82 47.0 5.32e-01 100.0% 74.1%
4981822 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.81 70.0 5.28e-01 100.0% 41.9%
3796564 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.81 49.0 5.20e-01 100.0% 68.4%
4981827 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.81 68.0 6.33e-01 100.0% 72.9%
4969186 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.80 69.0 6.00e-01 100.0% 62.4%
5003179 207.2.1.121 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Disaggr_assoc 0.79 76.0 5.60e-01 100.0% 54.8%
5020648 207.2.1.121 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Disaggr_assoc 0.79 75.0 5.36e-01 100.0% 47.4%
4944811 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.79 71.0 6.67e-01 100.0% 80.5%
4969187 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.78 71.0 6.34e-01 100.0% 72.2%
5071277 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.78 74.0 5.25e-01 100.0% 43.5%
2041632 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.77 70.0 5.61e-01 100.0% 52.9%
4970153 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.77 71.0 4.57e-01 100.0% 24.4%
4981149 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.77 67.0 6.13e-01 100.0% 72.3%
5044981 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.77 72.0 5.49e-01 100.0% 46.8%
4982197 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.77 70.0 5.24e-01 100.0% 43.4%
5041560 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.77 72.0 5.30e-01 100.0% 42.5%
4981811 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.77 68.0 5.48e-01 100.0% 52.1%
4945679 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.76 73.0 6.19e-01 100.0% 65.6%
5034452 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.76 70.0 6.08e-01 100.0% 67.2%
4969954 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.76 71.0 4.70e-01 97.7% 34.1%
4994782 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.75 66.0 4.64e-01 100.0% 32.4%
4946575 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.75 72.0 4.80e-01 100.0% 32.0%
3714749 207.2.1.56 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DGF-1_N 0.75 71.0 5.01e-01 100.0% 39.8%
5060098 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.74 71.0 5.85e-01 100.0% 60.7%
5034984 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.74 70.0 6.04e-01 100.0% 67.3%
3299107 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.74 70.0 6.21e-01 100.0% 83.2%
5078365 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.74 69.0 6.51e-01 100.0% 83.9%
3689334 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.73 70.0 5.14e-01 100.0% 55.0%
5034317 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.73 67.0 6.01e-01 100.0% 72.6%
4981475 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.73 70.0 5.73e-01 100.0% 65.1%
4980210 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.73 70.0 5.30e-01 100.0% 47.8%
3336085 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.73 53.0 5.04e-01 100.0% 64.5%
3273071 207.2.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP 0.73 69.0 4.79e-01 100.0% 40.6%
3983450 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.72 47.0 5.75e-01 93.2% 100.0%
4027041 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.72 52.0 5.28e-01 100.0% 74.9%
3584966 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.72 48.0 5.71e-01 94.9% 99.2%
4981765 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.72 67.0 5.36e-01 97.7% 63.1%
4982113 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.72 68.0 6.02e-01 100.0% 75.5%
4250320 207.2.1.80 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Peptidase_M26_N, Glug 0.71 66.0 5.50e-01 100.0% 65.8%
5040115 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.70 65.0 6.20e-01 100.0% 84.9%
3264282 207.2.1.73 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29740 0.70 66.0 5.83e-01 100.0% 72.2%
3577699 207.4.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.70 54.0 5.86e-01 100.0% 94.0%
134728 207.9.1.6 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 0.70 51.0 4.82e-01 100.0% 63.8%
4340140 207.9.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide 0.69 53.0 4.30e-01 100.0% 43.4%
5021887 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.69 58.0 5.18e-01 94.9% 65.1%
1788824 207.9.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide 0.69 50.0 4.59e-01 100.0% 57.1%
3256803 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.69 64.0 5.56e-01 100.0% 74.3%
2491358 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.69 65.0 4.69e-01 100.0% 47.2%
3821544 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.68 63.0 4.91e-01 100.0% 50.5%
3428231 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.67 63.0 4.98e-01 100.0% 54.5%
4675870 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.67 63.0 4.96e-01 100.0% 53.0%
3893825 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.67 62.0 4.82e-01 100.0% 50.1%
3350331 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.67 63.0 5.20e-01 100.0% 78.0%
3673584 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.67 63.0 5.09e-01 100.0% 65.6%
3634350 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.66 50.0 5.16e-01 100.0% 82.1%
4104061 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.65 61.0 4.80e-01 100.0% 55.1%
3621708 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.65 53.0 5.35e-01 100.0% 85.4%
3678167 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.65 60.0 4.87e-01 100.0% 63.7%
3327122 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.64 60.0 4.78e-01 100.0% 79.7%