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UBF23425.1

Arc-Vir

MZ334527__UBF23425.1__HATV-3-gp75__00075

Identity

Accession:
MZ334527 ↗
Protein ID:
UBF23425.1 ↗
Kingdom:
archaea

Quality

81.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kirjokansivirales› Pyrstoviridae› Hatrivirus› Haloarcula_tailed_virus_3

TaxID: 2877990

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-89
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.70 46.0 4.16e-01 94.3% 49.2%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.67 42.0 4.47e-01 80.5% 72.4%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.65 41.0 4.39e-01 81.6% 74.3%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.61 43.0 3.74e-01 100.0% 47.8%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 37.0 3.50e-01 92.0% 51.0%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 38.0 3.52e-01 85.1% 50.5%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 39.0 3.48e-01 86.2% 47.6%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 46.0 3.91e-01 86.2% 85.0%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 32.0 3.21e-01 72.4% 50.5%
1okjB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 32.0 2.80e-01 77.0% 37.0%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 31.0 3.58e-01 74.7% 79.3%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 33.0 3.62e-01 74.7% 73.2%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 26.0 3.28e-01 71.3% 77.8%
3t2lA02 2.60.40.2630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 3.43e-01 78.2% 80.8%
3zxkA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 42.0 3.23e-01 85.1% 60.2%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 32.0 3.37e-01 74.7% 64.1%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 29.0 3.23e-01 70.1% 64.2%
2r15A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 4.08e-01 100.0% 70.3%
2ky6A00 2.40.290.30 Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › Mediator complex subunit 25, ACID domain 0.53 45.0 3.66e-01 93.1% 60.8%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 37.0 3.61e-01 80.5% 64.0%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 32.0 3.42e-01 73.6% 70.4%
3htxA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 35.0 3.79e-01 74.7% 78.9%
1fu1A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.52 46.0 4.16e-01 96.6% 86.4%
5kolD00 3.90.950.20 Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like 0.52 37.0 2.95e-01 72.4% 93.0%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.51 38.0 3.19e-01 80.5% 46.6%
2ywqA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.51 39.0 3.94e-01 81.6% 81.8%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 30.0 2.99e-01 70.1% 53.1%
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 3.45e-01 75.9% 65.0%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3241305 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.80 54.0 4.49e-01 96.6% 42.9%
5017154 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.79 53.0 4.50e-01 93.1% 44.4%
5057515 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.75 49.0 5.80e-01 83.9% 96.7%
3493361 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.74 48.0 4.30e-01 89.7% 47.5%
3978756 3197.1.1.1 ↗ a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › PipB2_N 0.73 51.0 4.58e-01 96.6% 52.5%
3258377 331.23.1.0 ↗ a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.73 39.0 3.85e-01 72.4% 51.1%
3985617 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.68 43.0 4.69e-01 87.4% 78.6%
5013176 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.68 40.0 4.32e-01 85.1% 68.0%
3629491 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 36.0 4.33e-01 71.3% 85.5%
3709649 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.64 49.0 4.28e-01 88.5% 54.6%
3718300 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 38.0 4.03e-01 74.7% 68.0%
146717 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 33.0 3.24e-01 72.4% 45.9%
4314504 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.61 44.0 3.85e-01 95.4% 49.6%
5000498 896.1.1.1 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.61 34.0 3.96e-01 79.3% 78.3%
3798524 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.61 40.0 3.72e-01 87.4% 51.3%
3502952 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.59 43.0 4.15e-01 93.1% 67.0%
4528719 4.1.1.438 ↗ beta barrels › SH3 › SH3 › SH3 › PF27440 0.59 38.0 4.27e-01 86.2% 89.2%
3217379 896.1.1.2 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 0.59 45.0 4.37e-01 80.5% 76.8%
5050888 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 44.0 4.48e-01 81.6% 82.4%
3217617 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 42.0 3.79e-01 77.0% 60.0%
3479661 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 34.0 3.12e-01 72.4% 44.5%
3720521 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.57 40.0 3.89e-01 78.2% 65.3%
3786653 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.57 47.0 3.82e-01 89.7% 68.5%
3688824 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.57 40.0 3.89e-01 77.0% 66.3%
3262159 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.56 39.0 3.44e-01 86.2% 47.7%
3454238 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.56 43.0 4.35e-01 81.6% 85.9%
3497006 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 41.0 3.44e-01 77.0% 54.7%
3934401 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 38.0 3.54e-01 72.4% 94.5%
4962459 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 40.0 4.06e-01 78.2% 79.5%
3370313 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.55 40.0 3.32e-01 78.2% 43.6%
4025727 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.55 45.0 3.84e-01 89.7% 73.6%
5061930 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 3.68e-01 80.5% 66.3%
3252105 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.54 36.0 3.37e-01 81.6% 54.5%
5052285 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 40.0 3.82e-01 80.5% 68.6%
3620947 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.53 29.0 3.48e-01 77.0% 81.8%
3752179 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.53 41.0 3.60e-01 82.8% 56.9%
3497267 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 44.0 2.90e-01 89.7% 26.9%
4434271 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 36.0 3.21e-01 70.1% 79.2%
4025181 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.53 37.0 3.45e-01 78.2% 57.3%
135442 220.1.1.42 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › INPP5B_PH 0.52 38.0 3.22e-01 79.3% 48.1%
3893274 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.51 43.0 3.58e-01 94.3% 52.7%
3516025 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 38.0 3.65e-01 80.5% 68.6%
4542557 11.1.1.929 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28202 0.51 40.0 3.57e-01 89.7% 95.6%
3910021 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.51 36.0 3.41e-01 94.3% 61.9%
3933919 220.1.1.176 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 0.51 43.0 3.72e-01 93.1% 68.1%
3253075 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.50 40.0 3.58e-01 85.1% 81.7%
4943079 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 39.0 3.31e-01 85.1% 47.7%