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UBF23501.1

Arc-Vir

MZ334528__UBF23501.1__HRTV-28-gp63__00064

Identity

Accession:
MZ334528 ↗
Protein ID:
UBF23501.1 ↗
Kingdom:
archaea

Quality

81.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Suolaviridae› Pormufvirus› Halorubrum_tailed_virus_28

TaxID: 2878009

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-88
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i1sA00 3.10.290.30 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › MM3350-like 0.73 54.0 4.04e-01 77.9% 69.7%
2hfqA00 3.10.510.10 Alpha Beta › Roll › NE1680-like fold › NE1680-like 0.64 49.0 4.74e-01 81.8% 98.8%
2mj0A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.61 35.0 3.78e-01 100.0% 65.2%
2l03A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.61 38.0 3.86e-01 100.0% 64.9%
2zf3C00 2.50.20.30 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.60 41.0 3.16e-01 71.4% 94.5%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 41.0 3.31e-01 71.4% 66.9%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.59 44.0 3.67e-01 90.9% 44.1%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.59 46.0 3.35e-01 85.7% 91.4%
2ebfX01 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.57 43.0 3.25e-01 81.8% 45.1%
1x51A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 47.0 3.88e-01 93.5% 88.8%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.56 44.0 3.13e-01 87.0% 91.3%
4hscX04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.55 45.0 4.07e-01 100.0% 63.6%
2xc8A00 2.60.40.2980 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 38.0 3.40e-01 100.0% 48.8%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 44.0 4.47e-01 92.2% 100.0%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 45.0 4.53e-01 94.8% 100.0%
3ar4A04 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.53 39.0 2.88e-01 83.1% 75.0%
3gwyB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 45.0 3.79e-01 98.7% 91.7%
3d0jA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 42.0 3.56e-01 93.5% 60.1%
3jvgA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.51 37.0 2.95e-01 77.9% 81.5%
1m0wA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 37.0 3.38e-01 100.0% 54.6%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 43.0 3.57e-01 98.7% 59.9%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4253385 382.1.1.7 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type 0.70 43.0 4.51e-01 100.0% 68.1%
3899239 382.1.1.1 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.64 45.0 4.32e-01 100.0% 63.3%
3597134 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.61 52.0 3.51e-01 94.8% 68.8%
4620869 1.1.5.57 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 0.59 53.0 3.42e-01 100.0% 57.4%
3247529 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.59 35.0 3.77e-01 96.1% 67.7%
3894181 101.1.2.115 ↗ alpha arrays › HTH › HTH › winged helix domain › CDC27 0.58 43.0 3.42e-01 90.9% 36.0%
3507557 4081.1.1.11 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › CreD 0.57 50.0 3.58e-01 100.0% 54.9%
1678098 1.1.7.56 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Arabinose_Iso_C 0.55 43.0 3.29e-01 81.8% 55.6%
1108811 11.15.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C 0.55 45.0 4.04e-01 100.0% 64.2%
3789329 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 42.0 3.26e-01 84.4% 86.7%
3392961 10.2.1.31 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin 0.54 37.0 3.27e-01 100.0% 46.7%
3771406 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 36.0 3.16e-01 92.2% 43.2%
3490255 11.1.4.114 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF7062 0.54 36.0 3.41e-01 100.0% 54.0%
3350520 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.54 43.0 2.80e-01 92.2% 17.9%
3628570 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.53 43.0 3.90e-01 100.0% 64.8%
3482706 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 46.0 3.65e-01 100.0% 93.5%
3962549 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 45.0 3.65e-01 97.4% 58.7%
3237858 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.52 44.0 3.84e-01 100.0% 60.8%
3870496 11.1.1.464 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › AMOP 0.52 45.0 3.19e-01 100.0% 30.2%
168281 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 42.0 3.57e-01 93.5% 60.1%
3498264 219.1.1.53 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Vasohibin 0.51 46.0 3.18e-01 100.0% 33.3%
3282032 841.1.1.1 ↗ a+b two layers › Subtilisin inhibitor › Subtilisin inhibitor › Subtilisin inhibitor › SSI 0.51 37.0 3.33e-01 76.6% 100.0%
5011055 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 36.0 2.86e-01 77.9% 45.9%
4260202 9.15.1.1 ↗ beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.51 44.0 3.10e-01 97.4% 73.8%
2532980 219.1.1.53 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Vasohibin 0.50 45.0 3.12e-01 100.0% 33.9%
3468940 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.50 46.0 2.94e-01 100.0% 100.0%