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MZ348422.1__QYN79919.1__X__00026

Bact-Vir

MZ348422.1__QYN79919.1__X__00026

Identity

Accession:
MZ348422 ↗
Kingdom:
phage

Quality

51.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Branisovskavirus› Kosakonia_phage_Kc263

TaxID: 2863194

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-110
PDB
D2 high residues 128-244
PDB
D3 high residues 253-362
PDB
Domain cluster: rep: OR493421.1__WNY41141.1__X__00257__D4-99
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.69 47.0 4.24e-01 70.0% 71.1%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.66 46.0 3.92e-01 72.7% 47.8%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.66 46.0 3.93e-01 72.7% 46.3%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 48.0 4.50e-01 77.3% 72.5%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 46.0 4.27e-01 74.5% 68.1%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.63 44.0 4.29e-01 87.3% 65.8%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.63 50.0 4.62e-01 92.7% 65.1%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.62 42.0 4.09e-01 93.6% 63.3%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 44.0 4.17e-01 76.4% 94.0%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 45.0 4.14e-01 77.3% 68.1%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 43.0 4.04e-01 74.5% 69.9%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 44.0 4.14e-01 77.3% 67.9%
1v7wA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.58 45.0 3.25e-01 80.9% 98.7%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 44.0 3.64e-01 80.0% 95.5%
6i7sG01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.58 45.0 3.39e-01 81.8% 51.2%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 44.0 4.21e-01 80.9% 96.1%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 43.0 3.10e-01 81.8% 47.2%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 43.0 3.21e-01 80.9% 96.1%
4ktpB02 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.56 37.0 4.26e-01 80.0% 90.2%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.56 45.0 3.83e-01 85.5% 86.5%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 40.0 2.79e-01 75.5% 40.3%
3bvxA04 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.56 43.0 3.18e-01 81.8% 80.7%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 4.33e-01 87.3% 93.7%
5swiD01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 41.0 3.18e-01 79.1% 83.2%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.55 43.0 3.30e-01 81.8% 79.7%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 43.0 3.99e-01 82.7% 71.9%
1y7bA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 41.0 3.35e-01 80.9% 95.2%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.54 45.0 4.00e-01 90.9% 85.4%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.54 47.0 3.57e-01 98.2% 86.9%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.53 44.0 3.93e-01 90.9% 85.2%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 43.0 4.13e-01 86.4% 96.0%
7zgmA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 41.0 3.14e-01 81.8% 81.6%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.53 38.0 3.52e-01 73.6% 65.9%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.52 42.0 3.66e-01 87.3% 58.5%
2qziA00 3.40.1720.10 Alpha Beta › 3-Layer(aba) Sandwich › Streptococcus thermophilus LMG 18311 protein like › Streptococcus thermophilus LMG 18311 protein like 0.52 37.0 3.86e-01 73.6% 91.1%
1nkgA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 45.0 3.51e-01 97.3% 92.4%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.51 43.0 3.13e-01 94.5% 73.1%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.51 37.0 3.40e-01 75.5% 79.5%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.51 36.0 3.31e-01 72.7% 98.7%
5jowA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.52e-01 90.9% 72.0%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 3.69e-01 79.1% 77.7%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.50 44.0 4.00e-01 97.3% 98.7%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 42.0 3.23e-01 97.3% 86.1%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4052154 71.1.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.73 54.0 4.63e-01 83.6% 50.0%
4956163 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.71 51.0 4.34e-01 82.7% 45.6%
4806694 1033.1.1.3 ↗ beta duplicates or obligate multimers › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › TcdA_TcdB_pore, PF30720 0.71 52.0 4.10e-01 75.5% 70.8%
3248668 79.1.1.0 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.70 44.0 5.08e-01 74.5% 86.3%
3943202 813.1.1.0 ↗ a+b two layers › Chalcone isomerase › Chalcone isomerase › Chalcone isomerase 0.70 48.0 4.24e-01 70.9% 82.3%
3701925 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.66 46.0 4.53e-01 71.8% 71.7%
3593405 897.1.1.0 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 0.66 46.0 4.01e-01 72.7% 51.2%
5035423 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.66 43.0 4.82e-01 87.3% 85.9%
5014023 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.66 52.0 4.31e-01 82.7% 81.0%
1567525 3842.1.1.1 ↗ a+b two layers › Uncharacterized protein Rv3902c › Uncharacterized protein Rv3902c › Uncharacterized protein Rv3902c › Imm61 0.65 51.0 4.38e-01 94.5% 52.6%
820 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.64 48.0 4.50e-01 77.3% 72.5%
3291499 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.64 48.0 4.29e-01 77.3% 94.0%
5791 295.1.1.6 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.63 44.0 4.31e-01 87.3% 66.4%
4128674 4252.1.1.3 ↗ beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.62 43.0 3.46e-01 71.8% 98.6%
5792 295.1.1.6 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.62 42.0 4.08e-01 93.6% 62.8%
4992060 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.62 45.0 3.88e-01 82.7% 48.0%
2552758 9.1.1.24 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.61 48.0 4.49e-01 83.6% 89.8%
3233005 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 38.0 2.97e-01 71.8% 27.5%
5015520 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.60 45.0 3.62e-01 79.1% 61.9%
3344424 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 47.0 3.33e-01 98.2% 29.4%
5043414 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.59 47.0 4.36e-01 83.6% 96.3%
3894563 9.1.1.24 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.58 45.0 4.29e-01 81.8% 96.1%
2717534 12.3.1.31 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YgjK_N 0.58 43.0 3.17e-01 78.2% 78.2%
5001279 2004.1.1.308 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.58 50.0 3.53e-01 96.4% 34.9%
5059102 241.1.1.30 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 0.57 49.0 4.46e-01 91.8% 88.3%
4113246 220.1.1.153 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TRF2_HOY1 0.57 41.0 3.78e-01 72.7% 99.3%
3733356 298.1.1.25 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › ox_reductase_C 0.57 47.0 4.11e-01 88.2% 78.2%
140909 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.57 43.0 2.94e-01 81.8% 37.5%
3242741 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.57 37.0 2.86e-01 70.9% 27.4%
3474457 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.57 38.0 4.07e-01 70.9% 78.9%
3223040 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.56 41.0 3.15e-01 78.2% 88.2%
1309199 12.2.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Glyco_hydro_98C 0.56 40.0 3.43e-01 75.5% 91.5%
119302 3146.1.1.0 ↗ a+b complex topology › gH main domain › gH main domain › gH main domain 0.55 43.0 3.12e-01 84.5% 88.9%
3946240 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.55 44.0 3.63e-01 96.4% 48.7%
4991973 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 37.0 2.82e-01 95.5% 27.9%
3196366 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.54 41.0 3.53e-01 82.7% 87.6%
5012322 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 45.0 3.70e-01 93.6% 54.5%
3596915 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.53 47.0 3.01e-01 100.0% 98.9%
5022798 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 37.0 2.44e-01 73.6% 26.7%
5051538 298.1.1.8 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C 0.52 40.0 3.05e-01 81.8% 90.9%
184900 6044.1.1.1 ↗ a+b three layers › DUF1827-like › DUF1827-like › DUF1827-like › DUF1827 0.52 37.0 3.86e-01 73.6% 91.1%
3740081 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.51 37.0 3.77e-01 76.4% 77.3%
3534580 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.50 43.0 4.12e-01 93.6% 93.6%
3739965 298.1.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.50 39.0 2.79e-01 84.5% 53.5%
5022797 12.6.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related 0.50 45.0 3.61e-01 98.2% 74.0%