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MZ348422.1__QYN79943.1__X__00050

Bact-Vir

MZ348422.1__QYN79943.1__X__00050

Identity

Accession:
MZ348422 ↗
Kingdom:
phage

Quality

65.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Branisovskavirus› Kosakonia_phage_Kc263

TaxID: 2863194

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-113
PDB
D2 high residues 119-236
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 31.0 3.27e-01 92.4% 48.1%
4iedA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.65 47.0 3.67e-01 73.7% 63.6%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 31.0 3.45e-01 92.4% 55.8%
1ig8A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 48.0 4.62e-01 83.9% 76.9%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 44.0 3.98e-01 78.0% 100.0%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 42.0 3.49e-01 75.4% 41.4%
3g3oA00 3.20.100.30 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain 0.59 50.0 3.79e-01 92.4% 61.2%
4h0pA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 50.0 4.19e-01 94.1% 64.7%
1hjrA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 38.0 3.49e-01 75.4% 50.0%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.58 32.0 3.56e-01 94.1% 68.5%
4kreA04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 44.0 3.42e-01 79.7% 37.7%
5a67A00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.57 46.0 3.79e-01 84.7% 50.0%
1nrfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 42.0 3.35e-01 78.0% 62.6%
2q2rA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 40.0 3.58e-01 82.2% 51.5%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.56 36.0 4.28e-01 89.8% 97.5%
2ivnA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 40.0 3.56e-01 74.6% 92.9%
1i12D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 41.0 3.73e-01 81.4% 80.9%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.53 47.0 4.20e-01 100.0% 73.1%
5oj2A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 3.95e-01 71.2% 100.0%
2le1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 44.0 4.06e-01 90.7% 84.1%
1eq6A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.53 47.0 4.06e-01 100.0% 98.9%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 44.0 3.84e-01 90.7% 72.9%
3cnwA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 4.12e-01 90.7% 86.5%
4kc5C03 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.52 37.0 2.75e-01 71.2% 75.8%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 4.12e-01 92.4% 77.1%
2wmfA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.52 37.0 3.62e-01 93.2% 68.3%
3rt0C00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 3.86e-01 92.4% 77.9%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 43.0 3.94e-01 93.2% 84.0%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 41.0 3.90e-01 93.2% 73.2%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 4.00e-01 96.6% 77.5%
3uc2A00 2.60.40.3340 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 0.51 42.0 4.23e-01 92.4% 100.0%
2cuhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 35.0 3.93e-01 98.3% 96.6%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3812869 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.69 54.0 5.75e-01 93.2% 97.0%
3802306 284.1.2.0 ↗ a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.69 53.0 5.75e-01 90.7% 100.0%
3347329 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.68 50.0 5.43e-01 93.2% 92.0%
3819740 284.1.3.4 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.67 49.0 5.49e-01 85.6% 100.0%
3805804 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.67 47.0 5.34e-01 92.4% 100.0%
3698492 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.66 47.0 4.65e-01 73.7% 85.6%
3328840 284.1.2.0 ↗ a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.65 43.0 4.96e-01 77.1% 94.1%
3342794 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.65 45.0 4.98e-01 98.3% 92.2%
3295575 284.1.3.2 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.65 47.0 5.05e-01 90.7% 90.0%
4830163 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.64 45.0 4.03e-01 73.7% 55.6%
3318685 284.1.3.2 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.63 52.0 5.48e-01 93.2% 100.0%
3668772 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.63 44.0 3.87e-01 71.2% 56.5%
4981234 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.61 31.0 4.08e-01 72.9% 89.2%
3993469 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.60 42.0 4.40e-01 73.7% 81.8%
3338423 3131.1.1.2 ↗ a+b two layers › FYR domain › FYR domain › FYR domain › FYRN 0.59 54.0 4.98e-01 100.0% 92.0%
3224865 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.59 43.0 3.29e-01 74.6% 37.4%
3658323 284.1.2.1 ↗ a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C 0.59 46.0 4.87e-01 86.4% 93.3%
3676472 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.59 45.0 3.76e-01 82.2% 49.1%
3185222 868.1.1.4 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › VTC 0.59 50.0 3.77e-01 93.2% 57.7%
5019287 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 41.0 4.64e-01 77.1% 100.0%
3439646 284.1.3.2 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.58 44.0 4.63e-01 87.3% 89.5%
154280 2484.1.1.12 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.58 50.0 4.17e-01 94.1% 63.8%
1674584 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.57 46.0 3.79e-01 84.7% 50.0%
3454249 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 40.0 4.22e-01 72.9% 85.7%
3479461 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 49.0 4.10e-01 96.6% 97.1%
3264731 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.55 39.0 3.82e-01 72.9% 80.8%
3913017 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.55 39.0 3.89e-01 88.1% 69.6%
3921980 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.55 47.0 3.12e-01 95.8% 80.4%
3962288 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.54 45.0 4.40e-01 92.4% 82.3%
5084021 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.54 33.0 3.61e-01 93.2% 72.4%
3261416 897.1.1.0 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 0.54 48.0 4.57e-01 100.0% 91.4%
4929073 330.10.1.1 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO 0.53 45.0 4.01e-01 93.2% 75.9%
143699 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.53 44.0 4.14e-01 90.7% 88.8%
3472948 9.1.1.49 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 0.53 37.0 3.56e-01 71.2% 85.7%
3277897 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.52 43.0 4.06e-01 92.4% 86.0%
2814969 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.52 43.0 4.10e-01 92.4% 74.7%
3734800 5.1.4.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.51 43.0 2.91e-01 91.5% 66.4%
1715836 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.51 44.0 4.00e-01 96.6% 77.5%
5055184 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.50 34.0 3.94e-01 76.3% 96.5%
3204864 5.1.11.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Utp8_b_propeller 0.50 44.0 2.94e-01 94.1% 47.4%
3633634 5.1.4.80 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller 0.50 44.0 2.93e-01 94.1% 47.2%