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MZ348422.1__QYN79970.1__X__00077

Bact-Vir

MZ348422.1__QYN79970.1__X__00077

Identity

Accession:
MZ348422 ↗
Kingdom:
phage

Quality

75.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Branisovskavirus› Kosakonia_phage_Kc263

TaxID: 2863194

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-142
PDB
Domain cluster: rep: NC_041911.1__YP_009598786.1__FDH28_gp093__00093__D20-161
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 28.0 3.41e-01 97.6% 63.0%
1i9gA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.57 29.0 3.77e-01 92.1% 90.6%
3mb5A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.57 28.0 3.77e-01 92.9% 93.5%
5eqjB01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.55 28.0 3.51e-01 92.9% 83.1%
1o54A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.54 28.0 3.47e-01 92.9% 81.9%
5ccbA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.54 28.0 3.48e-01 92.9% 83.3%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 22.0 3.29e-01 91.3% 87.9%
3fl7A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.96e-01 100.0% 96.5%
3anzC00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.52 47.0 3.59e-01 100.0% 86.4%
7o52U02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 34.0 3.91e-01 100.0% 96.6%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954962 11.1.1.284 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.62 27.0 3.28e-01 87.3% 61.2%
4939562 284.1.1.9 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N 0.58 29.0 3.84e-01 92.9% 90.8%
4969944 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 27.0 3.60e-01 88.9% 81.4%
3211518 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.57 29.0 3.41e-01 86.5% 67.8%
3933752 11.1.1.178 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.57 33.0 3.11e-01 88.1% 46.7%
3282775 284.1.1.9 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N 0.57 29.0 3.76e-01 92.9% 90.8%
2319321 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.56 35.0 4.25e-01 100.0% 97.5%
3223111 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.54 36.0 3.99e-01 91.3% 84.0%
3411221 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.54 29.0 3.24e-01 88.9% 65.0%
5068791 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 31.0 3.24e-01 88.9% 61.7%
5064544 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 4.50e-01 100.0% 99.1%
4027344 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 39.0 3.98e-01 100.0% 83.3%
3264438 12.3.1.46 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD 0.50 44.0 3.49e-01 95.2% 81.6%
D2 high residues 155-263
PDB
Domain cluster: rep: NC_070999.1__YP_010675048.1__PQC65_gp135__00135__D175-256
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2b5eA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 45.0 4.74e-01 84.4% 89.7%
4euyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 41.0 4.49e-01 81.7% 93.0%
3euwA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.57 41.0 3.33e-01 74.3% 80.3%
6jw7A01 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 39.0 3.31e-01 71.6% 81.1%
4ew6A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 36.0 3.07e-01 71.6% 83.6%
4ga6A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.51 36.0 3.97e-01 94.5% 96.4%
7nz1G01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.51 40.0 4.27e-01 93.6% 99.0%
2cttA01 2.10.230.10 Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain 0.51 24.0 2.90e-01 89.9% 65.2%
1lc0A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 35.0 3.22e-01 73.4% 80.3%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3276337 2485.1.1.21 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › TXD17-like_Trx 0.60 48.0 4.59e-01 84.4% 91.2%
None — 0.57 42.0 3.00e-01 76.1% 57.7%
4247099 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.57 42.0 3.30e-01 76.1% 88.9%
4051351 298.1.1.8 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C 0.56 41.0 3.23e-01 76.1% 79.6%
3338957 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.55 45.0 3.94e-01 89.9% 81.2%
2559762 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 33.0 3.60e-01 97.2% 81.4%
D3 medium residues 299-356
PDB