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MZ348422.1__QYN80062.1__X__00169

Bact-Vir

MZ348422.1__QYN80062.1__X__00169

Identity

Accession:
MZ348422 ↗
Kingdom:
phage

Quality

72.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-119
PDB
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3n8hA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.75 55.0 5.68e-01 85.4% 82.9%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.67 31.0 3.45e-01 85.4% 52.2%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 31.0 3.97e-01 82.9% 75.6%
4a18P00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.67 36.0 3.93e-01 84.1% 63.6%
2ea9A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.66 44.0 4.24e-01 79.3% 60.6%
4fh3A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.65 53.0 4.67e-01 90.2% 84.0%
4uoiC00 3.30.160.890 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C 0.65 35.0 4.24e-01 87.8% 84.3%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 29.0 3.70e-01 81.7% 73.3%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.64 42.0 3.69e-01 78.0% 46.2%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.63 41.0 3.62e-01 78.0% 45.4%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 27.0 3.16e-01 79.3% 51.7%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.62 53.0 3.77e-01 93.9% 97.1%
3hj4A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.62 50.0 4.33e-01 89.0% 84.7%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.62 50.0 4.40e-01 89.0% 60.0%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 53.0 4.32e-01 97.6% 72.6%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.61 51.0 3.59e-01 93.9% 95.5%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.59 49.0 3.54e-01 92.7% 96.4%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 48.0 4.08e-01 90.2% 87.5%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 51.0 4.41e-01 98.8% 84.7%
2rb7A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.58 49.0 3.48e-01 93.9% 89.7%
1v43A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 33.0 3.67e-01 78.0% 71.9%
3besR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 4.65e-01 86.6% 98.8%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 44.0 4.12e-01 82.9% 87.3%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 49.0 4.21e-01 95.1% 84.0%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.57 45.0 3.82e-01 87.8% 85.8%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 49.0 4.19e-01 96.3% 81.2%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 50.0 4.24e-01 98.8% 81.5%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 47.0 3.37e-01 97.6% 38.6%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 33.0 3.72e-01 79.3% 74.2%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 47.0 3.99e-01 93.9% 81.2%
4zm3B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 42.0 3.51e-01 80.5% 76.1%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 49.0 4.36e-01 100.0% 78.3%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 32.0 3.56e-01 79.3% 73.8%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 46.0 3.95e-01 90.2% 87.4%
3bgtA01 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.55 41.0 2.98e-01 79.3% 83.1%
5c71A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.33e-01 89.0% 97.9%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.55 37.0 3.52e-01 70.7% 79.6%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 43.0 3.74e-01 82.9% 91.1%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 47.0 4.04e-01 93.9% 88.2%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 46.0 3.93e-01 96.3% 78.7%
5zg8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 33.0 3.10e-01 92.7% 49.0%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.54 42.0 3.80e-01 86.6% 76.9%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 4.15e-01 92.7% 72.4%
3oajA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 41.0 3.47e-01 100.0% 48.6%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 45.0 3.50e-01 95.1% 42.8%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 4.06e-01 76.8% 92.3%
1efpB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 41.0 2.95e-01 85.4% 52.0%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 45.0 4.15e-01 100.0% 73.2%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 37.0 3.60e-01 78.0% 67.4%
3drwB01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 42.0 2.86e-01 90.2% 61.9%
7esdB01 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.96e-01 85.4% 97.8%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 28.0 3.10e-01 81.7% 64.6%
2n54B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 35.0 3.87e-01 90.2% 87.9%
4qdiA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.50 41.0 3.12e-01 95.1% 57.2%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 38.0 3.39e-01 79.3% 88.5%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 41.0 3.62e-01 91.5% 84.8%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4941250 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.77 61.0 6.56e-01 87.8% 100.0%
4990916 283.2.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.74 62.0 5.83e-01 92.7% 92.0%
3785991 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.70 48.0 4.42e-01 70.7% 83.7%
4081797 3860.1.1.158 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › ThrE 0.69 61.0 5.11e-01 100.0% 77.9%
3929033 59.1.1.0 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.68 40.0 4.11e-01 73.2% 60.0%
4538358 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.68 46.0 4.11e-01 80.5% 49.6%
5010025 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.68 50.0 4.41e-01 78.0% 57.5%
3688914 283.1.1.4 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › ThrE 0.67 59.0 4.98e-01 100.0% 92.1%
3336357 3794.1.1.4 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCCA_BT 0.67 54.0 4.28e-01 87.8% 58.8%
4939095 319.1.1.4 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.66 43.0 4.52e-01 84.1% 73.3%
3370663 896.1.1.1 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.66 39.0 4.45e-01 81.7% 81.4%
4993868 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.65 44.0 4.61e-01 84.1% 76.7%
5074343 319.1.1.23 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 0.65 41.0 4.33e-01 79.3% 70.7%
3163931 219.1.1.79 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core2 0.65 54.0 4.41e-01 92.7% 59.4%
4952064 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.65 51.0 5.34e-01 87.8% 100.0%
4980371 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.65 42.0 4.18e-01 84.1% 62.5%
5002276 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.64 41.0 4.29e-01 79.3% 72.0%
5022798 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 42.0 2.63e-01 89.0% 11.4%
4943092 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.63 42.0 3.60e-01 80.5% 41.5%
4967968 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.63 41.0 3.85e-01 80.5% 52.4%
4986012 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.63 47.0 3.53e-01 79.3% 42.4%
3881061 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.63 39.0 4.31e-01 70.7% 78.5%
4927889 319.1.1.4 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.63 40.0 4.20e-01 70.7% 70.7%
3567966 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.62 47.0 4.50e-01 80.5% 97.9%
5005241 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.62 41.0 4.03e-01 84.1% 62.5%
4939124 873.1.1.19 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › MetOD1 0.62 46.0 3.75e-01 78.0% 71.3%
5004113 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.62 40.0 4.17e-01 81.7% 72.0%
3588455 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.62 48.0 5.13e-01 91.5% 97.1%
5027402 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.61 51.0 4.13e-01 96.3% 65.9%
3487462 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 51.0 4.40e-01 93.9% 84.6%
3627771 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 39.0 3.86e-01 75.6% 63.5%
4998404 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 39.0 4.59e-01 93.9% 93.3%
4570530 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.59 43.0 4.00e-01 76.8% 88.5%
5024985 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.59 36.0 3.79e-01 87.8% 68.6%
4929462 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.59 48.0 4.33e-01 89.0% 97.4%
5023930 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 37.0 3.73e-01 76.8% 63.5%
4978826 873.1.1.18 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HTH_24 0.57 49.0 3.53e-01 91.5% 63.9%
3164388 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.57 32.0 3.54e-01 78.0% 69.2%
3795930 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 47.0 3.93e-01 90.2% 84.9%
5007535 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.56 46.0 4.71e-01 92.7% 98.8%
3415072 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 48.0 4.01e-01 93.9% 79.3%
3894563 9.1.1.24 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.56 47.0 4.05e-01 91.5% 83.6%
4948475 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.56 47.0 3.98e-01 92.7% 99.3%
3925021 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 48.0 4.12e-01 96.3% 81.5%
4046583 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 49.0 4.25e-01 98.8% 84.6%
2438877 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 47.0 3.99e-01 93.9% 81.2%
3624142 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.55 47.0 3.99e-01 95.1% 80.0%
3385764 4954.1.1.0 a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit 0.55 37.0 3.86e-01 80.5% 74.7%
5075279 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 44.0 3.96e-01 89.0% 78.3%
3243872 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 43.0 2.95e-01 91.5% 24.6%
3215657 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.54 46.0 3.92e-01 93.9% 83.0%
2103558 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.54 47.0 3.95e-01 96.3% 79.0%
818 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.54 46.0 4.02e-01 96.3% 84.0%
3709800 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 34.0 3.21e-01 76.8% 54.7%
4928447 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.52 42.0 3.79e-01 87.8% 96.5%
3769483 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.52 45.0 3.89e-01 93.9% 85.6%
3194361 109.4.1.681 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 0.52 47.0 2.98e-01 100.0% 43.5%
5061635 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 42.0 2.54e-01 91.5% 13.2%
3387114 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.52 34.0 3.27e-01 80.5% 57.9%
3214098 330.1.1.24 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C 0.51 45.0 4.07e-01 100.0% 96.5%
5020903 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 40.0 3.93e-01 87.8% 95.6%
3230359 207.1.1.66 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF3557 0.50 39.0 2.82e-01 97.6% 25.1%
4492101 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.50 38.0 3.71e-01 80.5% 74.4%
5044541 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.50 39.0 2.83e-01 86.6% 73.9%