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MZ348422.1__QYN80100.1__X__00207

Bact-Vir

MZ348422.1__QYN80100.1__X__00207

Identity

Accession:
MZ348422 ↗
Kingdom:
phage

Quality

65.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Branisovskavirus› Kosakonia_phage_Kc263

TaxID: 2863194

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 72-157
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hywA00 3.30.1580.10 Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W 0.71 47.0 5.38e-01 91.9% 100.0%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.67 57.0 4.67e-01 91.9% 51.9%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 49.0 4.55e-01 93.0% 62.3%
2dk6A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.65 43.0 4.23e-01 75.6% 62.8%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 47.0 4.36e-01 93.0% 61.5%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.62 48.0 3.85e-01 83.7% 83.8%
2bszA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.61 45.0 3.67e-01 79.1% 82.9%
3cwxA00 3.40.1420.20 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD 0.61 48.0 4.23e-01 83.7% 77.6%
1w4tA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.60 46.0 3.68e-01 83.7% 81.5%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 39.0 3.98e-01 75.6% 67.4%
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 43.0 4.33e-01 76.7% 76.7%
1orvA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.59 46.0 2.88e-01 83.7% 56.6%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.59 40.0 3.20e-01 91.9% 36.1%
7qi3A01 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.59 45.0 3.10e-01 83.7% 93.4%
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.58 41.0 3.54e-01 73.3% 97.8%
3lnbA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.58 44.0 3.23e-01 82.6% 94.4%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 41.0 3.82e-01 74.4% 60.6%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 43.0 3.48e-01 84.9% 73.0%
2r31A01 3.30.2180.10 Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like 0.54 37.0 4.07e-01 98.8% 90.9%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.41e-01 94.2% 94.3%
8b28A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 45.0 3.16e-01 96.5% 97.5%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.54 46.0 3.92e-01 97.7% 69.8%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 38.0 2.43e-01 74.4% 39.1%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.53 37.0 3.90e-01 80.2% 79.7%
6whjD00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 42.0 2.93e-01 90.7% 49.7%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 45.0 2.92e-01 97.7% 49.3%
4bgpA01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.51 41.0 3.70e-01 91.9% 63.8%
5x7qA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.50 44.0 3.28e-01 98.8% 86.7%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 45.0 3.99e-01 100.0% 79.8%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4400376 295.1.1.12 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0231 0.78 57.0 5.51e-01 88.4% 68.0%
4237069 295.1.1.12 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0231 0.72 59.0 5.26e-01 90.7% 73.4%
4247937 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.72 60.0 5.55e-01 91.9% 88.2%
3415741 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.69 58.0 4.90e-01 93.0% 64.1%
4345843 295.1.1.12 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0231 0.68 59.0 5.23e-01 95.3% 73.4%
4936963 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 42.0 4.30e-01 73.3% 68.2%
3610634 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 46.0 2.93e-01 75.6% 31.9%
3222575 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.63 46.0 3.34e-01 88.4% 26.3%
3493963 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 46.0 4.41e-01 93.0% 67.0%
4487335 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.63 48.0 3.41e-01 83.7% 89.1%
4116939 2004.1.1.525 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B 0.62 52.0 3.28e-01 94.2% 86.3%
3789628 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 43.0 2.86e-01 72.1% 33.5%
3285183 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.61 47.0 3.34e-01 83.7% 88.7%
3253551 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.61 46.0 3.25e-01 81.4% 90.1%
4032324 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.61 46.0 3.34e-01 82.6% 94.2%
154893 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.60 46.0 3.30e-01 83.7% 89.7%
None — 0.60 43.0 2.95e-01 75.6% 39.0%
4162390 4121.1.1.2 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like 0.59 38.0 2.71e-01 72.1% 20.0%
4890983 6110.1.1.0 ↗ alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain 0.59 47.0 3.03e-01 88.4% 23.0%
3621723 5069.1.3.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.59 41.0 2.94e-01 73.3% 39.6%
3396774 220.1.1.168 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.58 41.0 3.82e-01 73.3% 89.1%
3600254 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.58 42.0 3.27e-01 75.6% 73.0%
142171 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.58 44.0 3.23e-01 82.6% 94.4%
3994190 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.58 47.0 3.14e-01 88.4% 53.5%
3388090 5.1.11.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.58 46.0 3.15e-01 86.0% 81.6%
3417117 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 41.0 2.81e-01 74.4% 39.7%
4668932 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.57 42.0 3.08e-01 79.1% 96.0%
3874132 220.1.1.170 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.56 39.0 3.57e-01 72.1% 57.4%
3235531 207.1.1.52 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.56 40.0 3.01e-01 87.2% 27.5%
3593313 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.55 40.0 3.08e-01 75.6% 68.9%
3286200 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 44.0 2.98e-01 88.4% 45.4%
3895743 3615.1.1.7 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › CD20 0.55 46.0 3.52e-01 91.9% 41.1%
3225640 220.1.1.168 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.55 39.0 3.42e-01 73.3% 78.4%
4950368 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.54 39.0 3.30e-01 76.7% 78.1%
3609092 633.23.1.23 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.54 40.0 3.21e-01 79.1% 71.4%
3230548 633.23.1.5 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.54 50.0 3.65e-01 100.0% 60.0%
3961809 9.11.1.1 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC 0.54 37.0 3.82e-01 70.9% 96.2%
5074866 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.53 44.0 3.41e-01 89.5% 79.5%
4308581 220.1.1.168 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.53 37.0 3.35e-01 73.3% 79.2%
3783819 331.10.1.1 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.53 41.0 2.74e-01 84.9% 87.0%
4039616 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 48.0 3.90e-01 100.0% 61.3%
3502265 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.52 48.0 3.68e-01 100.0% 57.8%
4355701 4121.1.1.2 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like 0.52 39.0 2.78e-01 81.4% 80.7%
3164017 9.11.1.0 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.51 36.0 3.55e-01 72.1% 78.9%
3680080 604.5.1.53 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TMEM62_C 0.50 44.0 3.30e-01 98.8% 90.5%
3972292 9.11.1.0 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.50 34.0 3.53e-01 70.9% 94.0%
5060936 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.50 30.0 3.01e-01 73.3% 56.7%
D2 medium residues 158-311
PDB
Domain cluster: rep: IMGVR_UViG_3300033155_003386-3300033155-Ga0366827_10693352__D8-157
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.70 61.0 6.38e-01 93.5% 100.0%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.69 38.0 4.73e-01 86.4% 85.7%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.60 51.0 5.18e-01 100.0% 90.9%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.59 29.0 3.86e-01 97.4% 85.7%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.58 50.0 5.11e-01 99.4% 96.6%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 36.0 4.12e-01 100.0% 96.3%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.53 29.0 3.58e-01 84.4% 83.7%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.53 26.0 3.12e-01 91.6% 69.7%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 33.0 3.93e-01 93.5% 96.9%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.53 42.0 4.47e-01 86.4% 97.7%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 18.0 3.01e-01 70.8% 94.0%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.51 36.0 3.90e-01 92.2% 89.5%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 34.0 3.73e-01 91.6% 86.0%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3929256 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.73 61.0 6.39e-01 93.5% 96.4%
3603731 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.66 56.0 5.88e-01 99.4% 100.0%
3427945 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.63 39.0 4.75e-01 97.4% 96.0%
5017154 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.61 50.0 5.33e-01 90.9% 100.0%
4014784 9.14.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 0.61 32.0 3.91e-01 98.7% 78.6%
3271763 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 38.0 3.91e-01 93.5% 71.3%
4458952 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.54 39.0 4.20e-01 93.5% 87.9%
3925367 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 40.0 4.07e-01 97.4% 79.3%
4986209 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 37.0 4.08e-01 99.4% 93.5%
4033840 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.51 32.0 2.98e-01 92.2% 48.4%
4145192 3180.1.1.0 ↗ a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related 0.51 35.0 4.02e-01 96.8% 100.0%
3169357 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.51 30.0 3.49e-01 94.8% 81.8%