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MZ369152.1__QYW02823.1__X__00013

Bact-Vir

MZ369152.1__QYW02823.1__X__00013

Identity

Accession:
MZ369152 ↗
Kingdom:
phage

Quality

75.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_BUCT006

TaxID: 2851083

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-96
PDB
Domain cluster: rep: MK335533.1__QAX92071.1__vBSsoS008_064__00064__D4-83
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08273.18 best Zn_Ribbon_Prim 34.0 4.10e-08 44.0% 91.9%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d0qA00 3.90.580.10 Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain 0.77 66.0 6.37e-01 100.0% 82.4%
2ecbA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 27.0 3.59e-01 84.6% 74.5%
2oap202 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 50.0 3.63e-01 94.5% 80.5%
3rm5B01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.57 47.0 3.33e-01 91.2% 72.9%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 34.0 3.82e-01 87.9% 90.9%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942532 375.1.1.39 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Prim_Zn_Ribbon 0.86 74.0 7.67e-01 98.9% 97.6%
3943026 375.1.1.39 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Prim_Zn_Ribbon 0.85 79.0 7.37e-01 98.9% 82.6%
3946622 375.1.1.39 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Prim_Zn_Ribbon 0.84 74.0 7.53e-01 98.9% 94.4%
4166935 375.1.1.15 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 0.78 67.0 6.51e-01 100.0% 84.0%
4680318 375.1.1.15 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 0.73 63.0 6.39e-01 100.0% 95.6%
4539347 375.1.1.15 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 0.72 63.0 6.12e-01 100.0% 88.0%
D2 medium residues 125-297
PDB