←Back to structures
MZ375300.1__QZB86124.1__seszw30S_13__00015
Bact-VirMZ375300.1__QZB86124.1__seszw30S_13__00015
Identity
- Accession:
- MZ375300 ↗
- Kingdom:
- phage
Quality
61.4
mean pLDDT
Taxonomy
TaxID: 2865759
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-83
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xgqb01 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.75 | 65.0 | 5.62e-01 | 100.0% | 63.4% |
| 8bveA03 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.70 | 62.0 | 5.96e-01 | 100.0% | 100.0% |
| 1g8lA04 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.68 | 60.0 | 5.75e-01 | 100.0% | 98.6% |
| 1r5bA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 46.0 | 4.19e-01 | 100.0% | 60.7% |
| 2d8bA01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 38.0 | 3.06e-01 | 77.8% | 80.0% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.50 | 34.0 | 3.10e-01 | 74.6% | 94.1% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083816 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.93 | 87.0 | 8.38e-01 | 100.0% | 91.4% |
| 2559744 | 70.4.1.2 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_head_fibr | 0.84 | 64.0 | 6.66e-01 | 100.0% | 86.4% |
| 5002644 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.81 | 74.0 | 6.99e-01 | 100.0% | 94.7% |
| 3602933 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.81 | 72.0 | 7.13e-01 | 100.0% | 92.3% |
| 5022524 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.79 | 62.0 | 6.00e-01 | 100.0% | 75.7% |
| 4963571 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.78 | 62.0 | 6.13e-01 | 100.0% | 81.5% |
| 5016125 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.77 | 60.0 | 6.40e-01 | 100.0% | 96.4% |
| 2640772 | 70.4.1.1 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › HDPD | 0.75 | 65.0 | 5.50e-01 | 100.0% | 59.0% |
| 5075574 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.73 | 66.0 | 6.10e-01 | 100.0% | 91.3% |
| 5002645 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.73 | 60.0 | 6.20e-01 | 100.0% | 96.6% |
| 3394913 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.72 | 43.0 | 4.13e-01 | 82.5% | 52.1% |
| 5025023 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.69 | 61.0 | 5.83e-01 | 100.0% | 92.0% |
| 1176867 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.69 | 61.0 | 5.45e-01 | 100.0% | 81.3% |
| 4602455 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.69 | 61.0 | 5.85e-01 | 100.0% | 95.9% |
| 3970970 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.68 | 61.0 | 5.75e-01 | 100.0% | 92.0% |
| 3513462 | 70.4.1.8 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement | 0.67 | 56.0 | 5.72e-01 | 100.0% | 95.0% |
| 4070519 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.66 | 58.0 | 5.49e-01 | 100.0% | 98.7% |
| 5083817 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.65 | 57.0 | 5.65e-01 | 98.4% | 98.5% |
| 3302829 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.61 | 39.0 | 3.86e-01 | 92.1% | 63.1% |
| 3401480 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.57 | 35.0 | 3.47e-01 | 82.5% | 55.7% |
| 3987900 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 34.0 | 3.07e-01 | 100.0% | 45.6% |
| 4879308 | 6.1.1.14 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › NTNH_C | 0.53 | 43.0 | 3.69e-01 | 92.1% | 73.1% |
| 3486329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 33.0 | 3.28e-01 | 93.7% | 61.5% |