MZ422438.1QXN67786.1FPHOBKDP_00032__00032

Bact-Vir

MZ422438.1__QXN67786.1__FPHOBKDP_00032__00032

Identity

82.3 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Listeria_phage_LPJP1

TaxID: 2852115

View cluster (10 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-87

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7ldgA00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.62	55.0	4.14e-01	100.0%	56.4%
4kx7A04	1.25.50.20	Mainly Alpha › Alpha Horseshoe › Zincin-like fold ›	0.60	50.0	3.49e-01	95.4%	41.5%
4epzA00	1.25.40.810	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ	0.55	42.0	3.64e-01	87.4%	68.8%
2qhpA00	3.40.1190.20	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase	0.54	47.0	3.35e-01	100.0%	58.0%
2podA02	3.20.20.120	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain	0.54	46.0	3.40e-01	98.9%	53.1%
2qkwB02	1.10.510.10	Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1	0.53	40.0	3.07e-01	79.3%	82.4%
2z4tA02	3.40.50.11120	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sialyltransferase, N-terminal GT-B Rossman nucleotide-binding domain	0.51	44.0	3.33e-01	97.7%	70.2%
3c02A00	1.20.1080.10	Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein.	0.51	44.0	3.30e-01	100.0%	85.1%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5072174	109.4.1.207 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2	0.62	54.0	3.74e-01	100.0%	51.6%
3436931	192.6.1.11 ↗	alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › eIF-3c_N	0.61	45.0	4.16e-01	77.0%	96.4%
5042711	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.58	45.0	3.85e-01	83.9%	73.1%

D2 medium residues 121-212

PDB

Domain cluster: rep: tryptophan_repeat_gene_family__YP_008003535__Mythimna_separata_entomopoxvirus_L__1293572__D148-217

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
8gpvA01	1.25.60.10	Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like	0.68	59.0	5.37e-01	98.9%	84.5%
2yvyA01	1.25.60.10	Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like	0.67	59.0	5.38e-01	100.0%	88.0%
7wbtA02	3.80.10.10	Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor	0.62	54.0	3.50e-01	100.0%	32.1%
7qpgW01	1.10.357.150	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 ›	0.55	47.0	3.81e-01	98.9%	80.5%
4kp7A01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.54	48.0	4.08e-01	100.0%	68.4%
3rmqA02	6.10.140.1650	Special › Helix non-globular › Helix Hairpins ›	0.53	32.0	3.82e-01	75.0%	100.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3660085	207.1.1.95 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14	0.60	52.0	3.46e-01	95.7%	43.2%
3883563	174.1.1.45 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › MENTAL	0.53	36.0	3.02e-01	70.7%	49.7%