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MZ422438.1__QXN67897.1__FPHOBKDP_00143__00143

Bact-Vir

MZ422438.1__QXN67897.1__FPHOBKDP_00143__00143

Identity

Accession:
MZ422438 ↗
Kingdom:
phage

Quality

79.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-69
PDB
D2 medium residues 74-127
PDB
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 53.0 5.17e-01 74.1% 93.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 51.0 4.98e-01 72.2% 91.5%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 51.0 5.44e-01 74.1% 100.0%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 48.0 4.83e-01 70.4% 98.2%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 50.0 4.82e-01 74.1% 87.1%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 51.0 4.76e-01 75.9% 88.1%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 51.0 4.50e-01 75.9% 82.1%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 48.0 5.15e-01 70.4% 91.3%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 50.0 5.28e-01 75.9% 98.0%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 49.0 4.72e-01 75.9% 95.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 50.0 4.39e-01 77.8% 70.9%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 48.0 4.59e-01 75.9% 87.5%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 48.0 4.65e-01 74.1% 93.2%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.97e-01 77.8% 96.2%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.65 47.0 4.76e-01 77.8% 87.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 4.55e-01 85.2% 72.6%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 4.43e-01 85.2% 76.2%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 51.0 4.58e-01 88.9% 100.0%
1lv9A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 43.0 4.10e-01 70.4% 68.8%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 50.0 4.43e-01 87.0% 80.2%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 3.99e-01 83.3% 62.5%
2hw6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 50.0 4.26e-01 87.0% 92.0%
1g5hB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.62 52.0 4.20e-01 96.3% 76.6%
4fg9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 50.0 4.35e-01 88.9% 91.1%
3a7fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 49.0 4.05e-01 87.0% 86.0%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 44.0 2.68e-01 81.5% 38.9%
2i4lB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.59 45.0 3.76e-01 85.2% 76.2%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 47.0 3.69e-01 100.0% 65.2%
2qcuB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 39.0 2.65e-01 72.2% 55.5%
2wqmA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 48.0 4.37e-01 90.7% 94.3%
3dlsB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 48.0 4.08e-01 100.0% 92.9%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.58 48.0 2.99e-01 100.0% 56.4%
6l6jA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 43.0 3.26e-01 81.5% 96.3%
2x7fC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 45.0 3.77e-01 87.0% 90.4%
2q5iA03 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 47.0 3.81e-01 100.0% 72.7%
4ks7A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 46.0 3.82e-01 88.9% 80.6%
1wu7A03 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 48.0 4.10e-01 100.0% 81.4%
4myjA05 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 43.0 3.73e-01 83.3% 88.6%
3k30A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 42.0 3.23e-01 81.5% 81.2%
4eqmA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 47.0 4.06e-01 96.3% 96.6%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 42.0 3.87e-01 85.2% 89.3%
3netB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.56 46.0 3.95e-01 100.0% 79.6%
5xilA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.56 47.0 3.67e-01 100.0% 63.3%
2y7jA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 44.0 3.74e-01 87.0% 96.7%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 43.0 4.15e-01 85.2% 76.2%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 40.0 2.87e-01 75.9% 47.0%
2lw7A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.55 43.0 3.58e-01 94.4% 71.1%
4yy8A02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.55 39.0 2.54e-01 79.6% 24.8%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.55 46.0 3.86e-01 100.0% 76.0%
3f8dA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 41.0 3.21e-01 81.5% 97.6%
4wi1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.55 46.0 3.65e-01 100.0% 67.5%
1adjB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.55 45.0 3.89e-01 100.0% 81.9%
4o38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 45.0 3.74e-01 92.6% 94.8%
2flhB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 43.0 3.34e-01 98.1% 78.4%
1fm4A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 44.0 3.29e-01 98.1% 76.7%
3weeB03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.53 38.0 3.07e-01 77.8% 88.7%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 39.0 4.04e-01 83.3% 98.1%
5e3iA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.53 43.0 3.69e-01 100.0% 83.8%
4a2aA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.53 38.0 3.68e-01 79.6% 98.5%
5cqfA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 41.0 2.46e-01 87.0% 42.7%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 39.0 3.66e-01 81.5% 65.7%
1httA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.52 43.0 3.68e-01 100.0% 81.6%
2j3lA01 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.52 42.0 3.50e-01 100.0% 69.9%
2id0A04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 39.0 3.38e-01 83.3% 73.6%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 40.0 3.70e-01 96.3% 87.3%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3842441 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 51.0 4.92e-01 74.1% 90.0%
3814411 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 55.0 4.46e-01 85.2% 59.0%
3609256 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 56.0 4.79e-01 85.2% 78.8%
3518287 4.1.1.347 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.71 54.0 4.20e-01 81.5% 54.8%
3749194 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 53.0 5.00e-01 79.6% 89.1%
3538030 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 54.0 5.00e-01 83.3% 90.0%
3617677 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 50.0 4.41e-01 75.9% 82.5%
3416133 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 50.0 4.48e-01 75.9% 74.7%
3581143 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.68 52.0 4.86e-01 81.5% 80.0%
3931161 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 54.0 4.23e-01 87.0% 73.9%
3939132 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 54.0 4.40e-01 87.0% 70.0%
5033075 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 51.0 5.14e-01 87.0% 89.1%
3570230 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 52.0 4.37e-01 87.0% 91.1%
3336463 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.64 47.0 4.19e-01 79.6% 91.0%
3472335 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 48.0 4.51e-01 79.6% 84.6%
4562754 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.63 52.0 4.37e-01 96.3% 82.0%
3967023 2003.1.2.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.63 42.0 2.75e-01 70.4% 55.7%
3472726 4.1.1.65 beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.63 49.0 3.79e-01 85.2% 47.2%
3937157 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.61 42.0 3.89e-01 70.4% 67.1%
3261235 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 46.0 4.03e-01 83.3% 67.1%
5025933 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 4.00e-01 87.0% 84.2%
4564801 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.60 50.0 4.25e-01 96.3% 77.9%
4163844 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.60 49.0 4.21e-01 96.3% 78.9%
4116168 316.1.1.36 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.60 41.0 2.92e-01 70.4% 24.4%
5049811 7577.1.1.2 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 0.60 41.0 2.50e-01 72.2% 10.8%
3262212 7502.1.1.7 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 0.60 49.0 4.07e-01 100.0% 71.8%
3424116 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.60 52.0 4.07e-01 100.0% 68.3%
3645101 375.1.1.80 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Dof 0.59 41.0 4.23e-01 70.4% 92.0%
3975338 209.1.1.6 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › InvE_AD 0.59 44.0 3.27e-01 81.5% 55.9%
3977312 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.58 36.0 2.70e-01 70.4% 21.3%
3406047 2.1.1.81 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 0.58 40.0 3.31e-01 74.1% 96.2%
4102050 209.1.1.1 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.57 42.0 3.38e-01 79.6% 64.5%
3388135 4292.2.1.1 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG 0.56 43.0 4.01e-01 92.6% 89.3%
4683191 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.55 46.0 3.90e-01 100.0% 82.0%
5018282 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 39.0 2.53e-01 79.6% 20.6%
4963580 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.55 41.0 3.73e-01 85.2% 90.0%
3495622 3246.1.1.3 few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAMTS_CR_2 0.55 38.0 3.50e-01 75.9% 65.3%
3381974 2003.1.2.47 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NDH2_C 0.54 39.0 2.60e-01 75.9% 72.0%
3593451 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 47.0 2.88e-01 98.1% 35.4%
3175902 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 40.0 3.93e-01 87.0% 91.7%
4046713 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.53 44.0 3.88e-01 100.0% 87.8%
5061930 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 38.0 3.27e-01 79.6% 46.3%
3673032 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 37.0 3.45e-01 75.9% 84.3%
4136811 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.52 43.0 2.92e-01 94.4% 67.9%
3580264 366.1.1.8 few secondary structure elements › Blood coagulation inhibitor (disintegrin) › Blood coagulation inhibitor (disintegrin) › Blood coagulation inhibitor (disintegrin) › ADAMTS_CR_3 0.52 37.0 3.10e-01 75.9% 54.0%
4062573 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.51 42.0 3.57e-01 100.0% 78.0%
4381486 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.51 40.0 3.64e-01 100.0% 88.6%
4100221 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.50 40.0 3.77e-01 85.2% 76.9%
D3 medium residues 128-262
PDB