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MZ422438.1__QXN67916.1__FPHOBKDP_00166__00162
Bact-VirMZ422438.1__QXN67916.1__FPHOBKDP_00166__00162
Identity
- Accession:
- MZ422438 ↗
- Kingdom:
- phage
Quality
48.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-58
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4czwA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.78 | 70.0 | 4.04e-01 | 100.0% | 16.6% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.77 | 68.0 | 4.15e-01 | 100.0% | 22.3% |
| 5o60c00 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.77 | 68.0 | 6.76e-01 | 100.0% | 95.9% |
| 1vw4X00 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.77 | 64.0 | 5.82e-01 | 100.0% | 70.3% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.76 | 60.0 | 5.92e-01 | 100.0% | 83.7% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.75 | 65.0 | 3.99e-01 | 100.0% | 21.8% |
| 5dm6100 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.74 | 61.0 | 5.89e-01 | 100.0% | 85.2% |
| 1yuzA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.73 | 53.0 | 5.75e-01 | 100.0% | 94.7% |
| 2pn0A02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.72 | 63.0 | 5.26e-01 | 100.0% | 80.5% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.71 | 56.0 | 5.58e-01 | 100.0% | 84.0% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.66 | 57.0 | 5.49e-01 | 100.0% | 85.5% |
| 2gfoA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 54.0 | 3.29e-01 | 100.0% | 21.5% |
| 5kycB02 | 2.20.210.10 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › ubp-family deubiquitinating enzyme superfamily | 0.64 | 53.0 | 5.18e-01 | 100.0% | 86.8% |
| 2mamA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 53.0 | 4.06e-01 | 100.0% | 39.8% |
| 2vl6A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.61 | 48.0 | 4.84e-01 | 95.7% | 91.7% |
| 6k2lA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 42.0 | 3.35e-01 | 76.6% | 82.0% |
| 2k2dA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.60 | 43.0 | 4.39e-01 | 100.0% | 80.9% |
| 2d9rA00 | 2.40.30.100 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like | 0.58 | 40.0 | 3.44e-01 | 74.5% | 81.2% |
| 4ecnA02 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.58 | 51.0 | 3.78e-01 | 100.0% | 38.5% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.52e-01 | 100.0% | 44.4% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 43.0 | 3.07e-01 | 91.5% | 68.6% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.55 | 42.0 | 3.87e-01 | 100.0% | 63.6% |
| 3qjhA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 3.47e-01 | 97.9% | 54.2% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.53 | 43.0 | 4.33e-01 | 95.7% | 95.7% |
| 7l0jB01 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.53 | 41.0 | 3.57e-01 | 100.0% | 61.8% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 45.0 | 3.05e-01 | 100.0% | 34.6% |
| 5eo9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.39e-01 | 95.7% | 51.4% |
| 1aw8B00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.52 | 44.0 | 3.63e-01 | 100.0% | 52.7% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 44.0 | 3.81e-01 | 100.0% | 92.4% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 42.0 | 3.54e-01 | 100.0% | 92.0% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 41.0 | 3.45e-01 | 100.0% | 51.7% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5052959 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.81 | 65.0 | 6.21e-01 | 100.0% | 76.4% |
| 4956150 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 66.0 | 6.30e-01 | 100.0% | 80.0% |
| 4059594 | 375.1.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L33 | 0.78 | 69.0 | 6.84e-01 | 100.0% | 95.9% |
| 4995774 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.78 | 60.0 | 6.42e-01 | 100.0% | 100.0% |
| 4101646 | 375.1.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L33 | 0.77 | 68.0 | 6.73e-01 | 100.0% | 94.0% |
| 4178097 | 375.1.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L33 | 0.77 | 68.0 | 6.54e-01 | 100.0% | 88.7% |
| 5027517 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 62.0 | 6.29e-01 | 100.0% | 93.3% |
| 3513462 | 70.4.1.8 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement | 0.76 | 45.0 | 4.14e-01 | 100.0% | 46.7% |
| 3607898 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.76 | 62.0 | 5.89e-01 | 100.0% | 76.4% |
| 3278973 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.74 | 57.0 | 6.02e-01 | 100.0% | 100.0% |
| 3594031 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 62.0 | 5.87e-01 | 100.0% | 78.2% |
| 4087736 | 375.1.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L33 | 0.74 | 64.0 | 6.33e-01 | 100.0% | 95.9% |
| 5016960 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 56.0 | 5.75e-01 | 97.9% | 88.9% |
| 4991294 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.72 | 60.0 | 5.94e-01 | 100.0% | 86.0% |
| 3221714 | 382.1.1.20 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › PF29036 | 0.71 | 60.0 | 5.31e-01 | 100.0% | 64.3% |
| 4971396 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 58.0 | 5.56e-01 | 100.0% | 78.2% |
| 4930203 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.70 | 59.0 | 5.60e-01 | 100.0% | 80.0% |
| 3325747 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 57.0 | 5.79e-01 | 97.9% | 97.8% |
| 3432172 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 57.0 | 5.60e-01 | 100.0% | 86.0% |
| 5019693 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.70 | 59.0 | 5.79e-01 | 97.9% | 88.0% |
| 3981111 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.70 | 50.0 | 3.51e-01 | 78.7% | 27.7% |
| 5026915 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 55.0 | 5.47e-01 | 100.0% | 84.0% |
| 3703311 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 59.0 | 5.80e-01 | 100.0% | 90.0% |
| 4982792 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.68 | 54.0 | 3.84e-01 | 100.0% | 27.5% |
| 3594960 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 58.0 | 5.71e-01 | 100.0% | 90.0% |
| 3719741 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 59.0 | 5.65e-01 | 100.0% | 85.5% |
| 3187671 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 58.0 | 5.38e-01 | 100.0% | 78.3% |
| 3244077 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.66 | 57.0 | 5.30e-01 | 100.0% | 78.3% |
| 1281652 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 57.0 | 5.49e-01 | 100.0% | 85.5% |
| 5035944 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 58.0 | 5.34e-01 | 100.0% | 81.7% |
| 5060037 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 56.0 | 5.23e-01 | 100.0% | 81.7% |
| 2640865 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 56.0 | 5.34e-01 | 100.0% | 85.5% |
| 3588629 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 52.0 | 5.39e-01 | 100.0% | 97.7% |
| 3601859 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 57.0 | 5.12e-01 | 100.0% | 87.7% |
| 4945087 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 48.0 | 3.78e-01 | 85.1% | 40.0% |
| 3725441 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 56.0 | 5.18e-01 | 100.0% | 90.0% |
| 3167534 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 55.0 | 4.73e-01 | 100.0% | 92.0% |
| 4988079 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 50.0 | 5.13e-01 | 97.9% | 95.6% |
| 4057017 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.62 | 45.0 | 3.66e-01 | 85.1% | 43.8% |
| 1736300 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.61 | 50.0 | 3.59e-01 | 100.0% | 28.7% |
| 1168802 | 3767.1.1.1 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Dicer_N | 0.60 | 51.0 | 3.65e-01 | 100.0% | 32.4% |
| 2775138 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 49.0 | 3.52e-01 | 100.0% | 31.1% |
| 3585360 | 11.1.1.842 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_C | 0.58 | 49.0 | 3.50e-01 | 100.0% | 39.3% |
| 3622958 | 304.127.1.2 ↗ | a+b two layers › Alpha-beta plaits › Notch heterodimerization domain › Notch heterodimerization domain › NOD,NODP | 0.56 | 47.0 | 3.42e-01 | 100.0% | 93.1% |
| 3223922 | 382.1.1.6 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR | 0.56 | 43.0 | 3.63e-01 | 100.0% | 44.8% |
| 3797115 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 3.40e-01 | 97.9% | 41.4% |
| 3391855 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 46.0 | 3.33e-01 | 100.0% | 40.0% |
| 3406524 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 43.0 | 3.74e-01 | 100.0% | 53.0% |
| 4175825 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.53 | 46.0 | 4.13e-01 | 100.0% | 70.8% |
| 3585925 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.53 | 43.0 | 3.07e-01 | 97.9% | 69.7% |
| 4135585 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.53 | 42.0 | 3.92e-01 | 100.0% | 70.0% |
| 4002360 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.53 | 41.0 | 2.74e-01 | 95.7% | 27.5% |
| 3410744 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 3.03e-01 | 100.0% | 35.4% |
| 3717125 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.52 | 41.0 | 3.25e-01 | 100.0% | 92.8% |
| 3242544 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 44.0 | 3.29e-01 | 100.0% | 65.4% |
| 3522165 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.52 | 44.0 | 3.69e-01 | 100.0% | 60.0% |
| 3219700 | 387.1.5.24 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Lustrin_cystein | 0.50 | 41.0 | 4.27e-01 | 89.4% | 97.7% |
D2
high
residues 78-189