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MZ436628.1__QXN67997.1__X__00014

Bact-Vir

MZ436628.1__QXN67997.1__X__00014

Identity

Accession:
MZ436628 ↗
Kingdom:
phage

Quality

93.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microcystis_phage_Mwe-Yong1

TaxID: 2852111

Cluster

View cluster (351 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-137
PDB
Domain cluster: rep: MT764210__UXF49854.1__7841G1D8-26__00026__D257-398
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11367.15 best Tail_completion_gp17 32.8 9.20e-08 96.3% 96.8%
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6toaF01 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.83 74.0 7.60e-01 97.8% 96.9%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.82 65.0 6.93e-01 99.3% 93.3%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.76 67.0 6.75e-01 99.3% 92.6%
3fz2A00 3.30.70.1700 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U 0.75 64.0 6.59e-01 98.5% 95.3%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.73 68.0 5.76e-01 100.0% 83.8%
2rjzA02 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.71 48.0 5.53e-01 98.5% 93.9%
2l25A00 3.30.2000.20 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.68 62.0 6.10e-01 98.5% 93.6%
2lfpA01 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.68 59.0 5.90e-01 97.0% 91.2%
3io1A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 44.0 4.71e-01 89.6% 75.9%
2nyiA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 36.0 4.27e-01 82.8% 78.9%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 41.0 4.46e-01 89.6% 77.8%
2y3uA02 3.30.980.50 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › 0.64 46.0 4.90e-01 100.0% 86.7%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 53.0 5.34e-01 99.3% 92.7%
6zzmA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.61 43.0 3.62e-01 73.1% 77.6%
7r5mA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.61 42.0 3.56e-01 70.9% 78.0%
2j5aA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.60 37.0 4.14e-01 87.3% 77.4%
3pfoA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 43.0 4.38e-01 82.8% 77.3%
2f7vA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 38.0 4.16e-01 89.6% 81.5%
3pfeA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 42.0 4.30e-01 82.8% 77.7%
2w59B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 38.0 4.11e-01 87.3% 78.9%
1g5hA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 52.0 4.07e-01 100.0% 85.8%
1hc7A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 50.0 4.06e-01 97.8% 79.9%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 37.0 4.04e-01 91.0% 82.2%
3mf1B00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.56 49.0 3.96e-01 97.8% 81.1%
2rhqB05 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.56 50.0 4.35e-01 97.8% 96.6%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 41.0 3.71e-01 76.1% 72.9%
2je8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 36.0 3.95e-01 87.3% 80.0%
5v7qT00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 36.0 4.12e-01 95.5% 90.8%
2pokA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 46.0 4.24e-01 90.3% 81.2%
6pqhA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 48.0 3.52e-01 98.5% 88.3%
1usyC00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 48.0 3.84e-01 98.5% 98.9%
3kg4A00 3.30.70.2660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 42.0 3.79e-01 94.8% 59.8%
2xgtA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 47.0 3.58e-01 98.5% 89.4%
5z1aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.77e-01 88.1% 77.1%
3igqC00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.53 44.0 3.94e-01 90.3% 64.1%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 38.0 3.72e-01 74.6% 86.1%
4z9eA00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.52 33.0 3.96e-01 97.0% 100.0%
3u6yA00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.52 35.0 4.01e-01 95.5% 92.9%
3w1eA02 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.52 42.0 3.85e-01 100.0% 66.1%
1g84A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 4.06e-01 73.1% 96.2%
2a73B06 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.51 40.0 3.95e-01 83.6% 81.2%
4of0A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.66e-01 70.9% 98.4%
6y1zA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.50 45.0 3.90e-01 99.3% 81.1%
4cyuA00 3.30.70.560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.50 38.0 3.63e-01 94.8% 68.8%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5004177 304.124.1.3 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 0.91 80.0 8.26e-01 97.8% 97.6%
3941902 304.124.1.7 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Minor_capsid_3 0.86 76.0 7.93e-01 99.3% 99.2%
2642577 304.124.1.3 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 0.83 75.0 7.55e-01 98.5% 94.8%
4030972 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.82 68.0 7.23e-01 99.3% 97.5%
4883824 304.124.1.6 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF5072 0.80 66.0 6.74e-01 99.3% 89.9%
3589225 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.79 73.0 7.35e-01 99.3% 97.8%
4928893 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.78 72.0 7.03e-01 98.5% 95.2%
3585212 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.78 72.0 6.08e-01 100.0% 89.8%
5040945 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.77 72.0 6.91e-01 100.0% 94.0%
5083619 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.76 70.0 6.90e-01 98.5% 95.1%
4261744 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.75 65.0 6.70e-01 97.8% 97.6%
3964886 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.75 68.0 6.71e-01 96.3% 96.4%
3970985 304.124.1.9 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 0.74 69.0 6.79e-01 99.3% 98.6%
4034134 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.73 62.0 6.39e-01 96.3% 98.4%
364035 304.124.1.1 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_U 0.72 64.0 6.49e-01 98.5% 97.7%
3589403 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.72 59.0 6.25e-01 95.5% 97.5%
3972055 11.1.1.410 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD 0.71 42.0 4.48e-01 70.9% 65.8%
5004179 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.68 42.0 5.06e-01 97.0% 96.5%
4619723 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.67 43.0 4.55e-01 73.1% 72.5%
3954006 256.1.1.1 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.64 40.0 4.89e-01 94.0% 100.0%
3179047 11.1.1.264 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GlcNase 0.62 38.0 4.07e-01 87.3% 70.4%
1444177 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 53.0 5.32e-01 99.3% 92.6%
4888732 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.60 52.0 4.97e-01 99.3% 81.4%
3178808 314.1.1.11 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta 0.59 53.0 4.39e-01 97.0% 96.5%
4940579 314.1.1.11 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta 0.58 51.0 4.60e-01 97.0% 97.9%
3936819 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 44.0 4.17e-01 80.6% 80.0%
5037379 314.1.1.11 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta 0.57 51.0 4.45e-01 97.0% 92.0%
4415830 314.1.1.11 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta 0.57 51.0 4.47e-01 97.8% 91.5%
4945294 314.1.1.11 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta 0.57 51.0 4.49e-01 97.8% 95.9%
4937467 314.1.1.11 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta 0.57 51.0 4.52e-01 97.8% 98.4%
4975302 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.57 51.0 4.44e-01 97.8% 92.5%
5040976 314.1.1.11 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta 0.57 51.0 4.42e-01 97.8% 92.5%
4927124 314.1.1.11 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta 0.56 50.0 4.34e-01 97.0% 94.6%
4338593 314.1.1.3 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.56 50.0 4.20e-01 100.0% 96.6%
None — 0.56 49.0 3.78e-01 100.0% 65.5%
3381499 314.1.1.1 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2 0.55 49.0 3.46e-01 98.5% 91.6%
3701983 304.153.1.0 ↗ a+b two layers › Alpha-beta plaits › Collagenase G catalytic helper subdomain › Collagenase G catalytic helper subdomain 0.55 49.0 4.53e-01 100.0% 84.0%
3934347 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 4.19e-01 73.9% 98.3%
3742193 314.1.1.9 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.54 49.0 3.59e-01 97.8% 88.6%
5066585 881.2.1.0 ↗ a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like 0.54 38.0 3.91e-01 97.0% 74.6%
3705145 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.54 48.0 4.43e-01 100.0% 83.3%
3581757 11.12.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD,Neur_chan_memb 0.54 38.0 3.27e-01 87.3% 44.0%
3933746 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.54 33.0 3.48e-01 78.4% 66.7%
3484323 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 38.0 3.61e-01 73.9% 71.9%
3277207 11.1.1.900 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM49 0.52 42.0 4.35e-01 89.6% 91.2%
3229892 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.52 45.0 3.87e-01 99.3% 83.0%
3473096 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.51 45.0 3.92e-01 99.3% 80.5%
3638746 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 3.96e-01 75.4% 100.0%
3660143 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 40.0 3.19e-01 82.1% 50.9%
5029881 310.3.1.26 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › HVO_2525_N 0.51 46.0 4.55e-01 99.3% 92.4%
3481119 11.12.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like 0.51 44.0 3.83e-01 98.5% 79.1%
3496210 11.12.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like 0.50 44.0 4.00e-01 97.8% 92.4%
3219666 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.50 44.0 3.78e-01 99.3% 75.2%
None — 0.50 46.0 4.10e-01 98.5% 88.6%
3969233 11.1.5.59 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 0.50 41.0 4.27e-01 88.8% 96.0%