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MZ436628.1__QXN67999.1__X__00016

Bact-Vir

MZ436628.1__QXN67999.1__X__00016

Identity

Accession:
MZ436628 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 47-259
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ylmA00 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.68 42.0 5.06e-01 87.3% 91.5%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 27.0 3.69e-01 88.7% 70.8%
2yevA03 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.61 46.0 4.94e-01 100.0% 89.7%
4xvxA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.60 36.0 4.19e-01 78.9% 83.0%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.59 34.0 4.19e-01 96.2% 89.3%
1sj7C00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.59 35.0 3.95e-01 87.8% 74.1%
4o6yB00 1.20.120.1770 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.59 38.0 3.90e-01 87.8% 64.5%
1rx0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.58 36.0 4.08e-01 77.9% 81.9%
5iduC03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.58 35.0 3.99e-01 78.4% 78.6%
1e3mB04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.58 38.0 4.41e-01 96.7% 92.8%
8hk0C01 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 36.0 4.18e-01 77.5% 87.3%
4x28C03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 35.0 4.16e-01 78.9% 89.5%
1r2jA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.56 33.0 3.89e-01 77.5% 84.0%
3kh1A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.55 33.0 3.48e-01 77.9% 63.6%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.55 27.0 3.64e-01 100.0% 89.9%
2rfqC03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.54 37.0 4.07e-01 90.1% 84.6%
2jifA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.54 34.0 3.91e-01 78.9% 84.4%
5zw7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.54 34.0 3.88e-01 78.9% 85.5%
3am6A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 43.0 4.30e-01 86.4% 80.8%
1xioA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 44.0 4.44e-01 88.3% 85.3%
2or0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.53 39.0 4.13e-01 88.7% 84.4%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.53 32.0 3.81e-01 77.9% 89.1%
2hfiA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.52 31.0 3.88e-01 80.3% 99.2%
2fonA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.52 31.0 3.83e-01 78.9% 93.8%
5k3hB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.51 31.0 3.78e-01 78.9% 94.0%
2k19A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.51 24.0 3.36e-01 77.0% 92.9%
7qoaA01 1.10.4160.10 Mainly Alpha › Orthogonal Bundle › Hydantoin permease › Hydantoin permease 0.50 38.0 3.11e-01 85.9% 41.8%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4999332 3930.1.1.3 alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical 0.70 30.0 3.60e-01 72.8% 57.9%
4020083 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.60 37.0 4.42e-01 79.3% 92.1%
3741398 632.1.1.8 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › SOG2 0.58 34.0 4.20e-01 75.1% 92.3%
3251841 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.57 33.0 4.07e-01 89.7% 89.6%
3697482 633.6.1.1 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.57 38.0 4.04e-01 78.9% 76.6%
4162545 5069.1.1.4 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ferric_reduct 0.57 36.0 3.60e-01 85.0% 59.5%
3477305 130.1.2.1 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › ribosome-binding domain of Mdm38 › LETM1_RBD 0.55 31.0 3.36e-01 97.7% 61.6%
3494149 601.1.2.6 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_IBS2B 0.54 35.0 3.90e-01 87.3% 81.2%
5076670 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.53 31.0 3.75e-01 83.6% 86.7%
4011740 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.53 25.0 3.59e-01 88.7% 96.0%
3938179 5054.1.1.9 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PKD_channel 0.51 38.0 3.23e-01 89.2% 45.7%
4016383 5001.1.1.85 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Fung_rhodopsin 0.51 46.0 4.23e-01 100.0% 85.6%
4028496 601.14.1.0 alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin 0.50 36.0 3.48e-01 87.8% 65.1%
D2 high residues 264-314
PDB
Domain cluster: representative
CATH (80)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.77 53.0 3.17e-01 72.5% 11.5%
1f98A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 52.0 3.88e-01 74.5% 35.2%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.72 50.0 4.12e-01 74.5% 100.0%
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.71 50.0 3.87e-01 74.5% 45.5%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 50.0 4.01e-01 98.0% 38.5%
1pbyB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 61.0 3.70e-01 100.0% 40.4%
5aykA07 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.68 56.0 4.49e-01 100.0% 81.7%
4bfmA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.67 58.0 3.57e-01 98.0% 44.1%
4ywzB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 51.0 3.71e-01 84.3% 39.0%
2jheA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 51.0 4.04e-01 84.3% 39.8%
3s95A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 45.0 3.85e-01 74.5% 77.3%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.65 54.0 3.94e-01 98.0% 47.7%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.64 45.0 4.54e-01 74.5% 74.5%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 45.0 3.20e-01 74.5% 37.0%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.64 46.0 2.84e-01 78.4% 30.6%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.64 50.0 3.80e-01 92.2% 36.4%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 51.0 4.52e-01 94.1% 61.3%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.63 46.0 2.93e-01 78.4% 46.2%
3mcrA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.63 54.0 3.88e-01 98.0% 34.4%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.62 43.0 4.57e-01 76.5% 86.4%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 44.0 4.11e-01 98.0% 59.1%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 51.0 3.97e-01 98.0% 64.3%
3a32A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.62 50.0 3.83e-01 100.0% 36.9%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.62 51.0 3.12e-01 98.0% 41.6%
2o8bB02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.61 50.0 3.49e-01 100.0% 26.3%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.61 50.0 4.41e-01 100.0% 62.0%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.60 48.0 4.35e-01 100.0% 63.6%
5wceA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.60 53.0 3.94e-01 100.0% 40.3%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 45.0 4.11e-01 96.1% 60.6%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 41.0 2.68e-01 72.5% 16.3%
2lkoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 48.0 3.61e-01 98.0% 34.8%
1sezA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 44.0 3.11e-01 82.4% 62.2%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.60 43.0 3.14e-01 76.5% 37.4%
4jf6A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 50.0 3.32e-01 100.0% 25.9%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.59 41.0 3.15e-01 74.5% 30.5%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.59 49.0 3.63e-01 98.0% 86.1%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 42.0 3.20e-01 76.5% 43.4%
1luiA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 49.0 3.99e-01 100.0% 70.4%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.59 47.0 3.35e-01 92.2% 37.3%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 47.0 3.56e-01 96.1% 98.6%
4q9cA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 3.86e-01 98.0% 90.5%
5is8A02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.58 45.0 3.14e-01 90.2% 81.9%
1q48A00 3.90.1010.10 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.58 40.0 3.05e-01 74.5% 73.1%
4l8nA03 3.30.160.670 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 47.0 3.43e-01 98.0% 55.5%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.58 40.0 3.75e-01 74.5% 64.6%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 48.0 4.65e-01 96.1% 88.1%
2uvaG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 41.0 3.10e-01 78.4% 40.4%
1w96C04 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.57 41.0 2.72e-01 80.4% 35.9%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.57 40.0 3.95e-01 76.5% 71.9%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 3.50e-01 84.3% 77.7%
2l5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 46.0 3.29e-01 96.1% 88.6%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 45.0 3.49e-01 94.1% 78.1%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 48.0 3.95e-01 98.0% 90.5%
6fezA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 46.0 3.92e-01 98.0% 98.9%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 44.0 3.02e-01 88.2% 67.2%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.56 39.0 3.86e-01 78.4% 69.6%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 46.0 4.21e-01 98.0% 73.0%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.56 44.0 3.53e-01 96.1% 52.9%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 44.0 3.28e-01 98.0% 69.3%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.56 45.0 3.79e-01 100.0% 74.5%
2g2sA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.56 38.0 3.69e-01 76.5% 67.2%
1jhnA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 2.96e-01 98.0% 65.1%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 3.68e-01 98.0% 88.6%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.54 43.0 3.31e-01 98.0% 97.2%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 3.07e-01 94.1% 35.2%
3f02B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 43.0 3.53e-01 94.1% 70.0%
1rypC00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 42.0 2.79e-01 92.2% 83.2%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 43.0 3.70e-01 92.2% 63.9%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 40.0 3.07e-01 92.2% 98.0%
1kyfA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.53 43.0 3.49e-01 100.0% 99.1%
3dsbA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 42.0 3.48e-01 94.1% 100.0%
3fgqA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 43.0 3.06e-01 98.0% 58.2%
2i52B00 3.30.1300.20 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) 0.52 36.0 2.89e-01 76.5% 32.8%
2kouA00 3.30.160.380 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Dicer dimerisation domain 0.52 42.0 3.50e-01 98.0% 74.5%
2o95B00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.52 38.0 2.75e-01 78.4% 27.3%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 3.95e-01 100.0% 87.3%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 43.0 4.12e-01 100.0% 85.7%
2iecD00 3.30.1300.20 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) 0.50 35.0 2.82e-01 76.5% 33.3%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 42.0 3.92e-01 100.0% 81.2%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 41.0 3.96e-01 100.0% 87.1%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3173796 331.1.1.5 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.79 56.0 4.67e-01 74.5% 64.7%
5041343 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.75 51.0 4.46e-01 74.5% 48.0%
5056544 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 51.0 4.97e-01 74.5% 65.5%
3930354 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.74 64.0 4.95e-01 100.0% 87.8%
5048387 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.73 51.0 4.85e-01 74.5% 66.7%
3350473 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.71 50.0 4.56e-01 74.5% 58.6%
5044346 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 52.0 4.04e-01 78.4% 41.8%
3718300 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 58.0 5.12e-01 98.0% 64.0%
3219739 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.69 60.0 3.62e-01 100.0% 26.6%
3796107 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.69 46.0 3.81e-01 76.5% 38.9%
3578584 5.1.8.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.69 48.0 3.78e-01 74.5% 83.6%
3726266 3363.1.1.0 beta sandwiches › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs 0.68 48.0 4.04e-01 76.5% 44.4%
3496242 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 46.0 4.71e-01 76.5% 98.0%
4982249 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.65 46.0 3.82e-01 76.5% 64.2%
3924626 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.64 55.0 4.70e-01 98.0% 69.4%
3176073 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.64 45.0 4.07e-01 74.5% 84.1%
3972580 331.1.1.3 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › AlkA_N 0.64 44.0 3.90e-01 74.5% 68.8%
4138663 4099.1.1.3 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 0.64 53.0 5.01e-01 100.0% 78.5%
4226251 375.1.1.252 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF27302 0.64 44.0 4.25e-01 74.5% 63.3%
5041249 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 44.0 4.06e-01 82.4% 54.3%
4842604 4272.1.1.1 a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.63 55.0 4.47e-01 98.0% 55.2%
3179468 330.1.1.18 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 0.63 52.0 3.81e-01 100.0% 71.2%
3499841 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 51.0 4.32e-01 94.1% 60.0%
3176281 896.1.1.3 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.62 51.0 4.61e-01 100.0% 65.3%
3507809 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.62 43.0 4.31e-01 84.3% 69.8%
3518948 214.1.1.9 a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.62 49.0 4.35e-01 96.1% 100.0%
3902618 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 44.0 3.49e-01 76.5% 49.5%
3194226 12.6.1.3 beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Bac_rhamnosid_C 0.61 41.0 4.15e-01 74.5% 70.0%
3937984 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.61 51.0 4.13e-01 96.1% 52.0%
5035584 375.1.1.31 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.61 47.0 4.12e-01 98.0% 56.2%
3174442 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 51.0 3.29e-01 100.0% 20.8%
3994778 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 50.0 3.73e-01 96.1% 39.6%
4990492 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 42.0 4.29e-01 74.5% 76.0%
4953226 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.60 46.0 4.28e-01 84.3% 83.1%
3879303 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.60 48.0 4.27e-01 94.1% 68.8%
3233399 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.60 43.0 3.51e-01 74.5% 43.2%
4416182 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.60 49.0 4.09e-01 100.0% 72.4%
3940986 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.60 50.0 4.51e-01 100.0% 70.7%
3938330 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.60 50.0 3.11e-01 96.1% 42.0%
3821886 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.60 50.0 4.51e-01 100.0% 69.3%
5029914 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.60 46.0 4.57e-01 94.1% 96.4%
5036880 330.1.1.35 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › LeuA_dimer 0.59 48.0 4.43e-01 94.1% 74.3%
4770305 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.59 40.0 3.78e-01 72.5% 60.9%
None 0.59 46.0 2.80e-01 94.1% 20.7%
3520079 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 48.0 3.85e-01 98.0% 46.1%
4960002 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 46.0 3.89e-01 98.0% 51.1%
3810572 2003.1.5.26 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 0.58 42.0 2.55e-01 80.4% 55.9%
3400623 284.1.3.13 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › PF30019 0.58 47.0 4.26e-01 100.0% 65.3%
4297447 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 48.0 3.56e-01 96.1% 38.6%
3997580 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.58 46.0 3.39e-01 100.0% 67.4%
3513352 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.58 48.0 3.86e-01 100.0% 65.2%
3258675 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.58 48.0 3.63e-01 100.0% 55.0%
3715886 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 49.0 2.97e-01 98.0% 24.3%
3931594 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 47.0 3.99e-01 94.1% 56.7%
3249998 5.1.5.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FG-GAP_3 0.58 44.0 2.79e-01 88.2% 57.8%
3404964 221.13.1.0 a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.58 48.0 3.85e-01 100.0% 65.2%
2490256 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.58 40.0 3.73e-01 74.5% 63.6%
3585861 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 47.0 3.55e-01 96.1% 39.3%
4797813 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.57 40.0 3.95e-01 76.5% 71.9%
3603056 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.57 46.0 4.25e-01 100.0% 89.3%
5047088 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.57 48.0 3.18e-01 98.0% 25.9%
3780194 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 47.0 3.08e-01 98.0% 22.0%
3391411 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 40.0 4.35e-01 76.5% 97.5%
4002087 3698.1.1.1 beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C 0.56 40.0 2.86e-01 76.5% 28.1%
3336503 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.56 47.0 3.61e-01 98.0% 40.8%
4058654 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.56 46.0 3.88e-01 100.0% 64.6%
3235699 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.56 46.0 3.70e-01 100.0% 47.8%
4771028 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.56 39.0 3.72e-01 76.5% 68.3%
3523017 10.1.1.3 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Calreticulin 0.55 44.0 2.72e-01 100.0% 60.2%
4609498 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.55 43.0 3.94e-01 98.0% 63.7%
4935472 330.4.1.0 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 0.55 45.0 4.19e-01 100.0% 78.6%
3742752 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.55 47.0 3.20e-01 100.0% 27.8%
4413978 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.55 41.0 2.68e-01 84.3% 35.4%
3820157 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.53 40.0 2.92e-01 92.2% 41.6%
4452289 4000.1.1.1 a+b two layers › Escherichia coli HybE › Escherichia coli HybE › Escherichia coli HybE › NiFe-hyd_HybE 0.53 40.0 3.10e-01 92.2% 91.4%
3780755 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.53 41.0 2.75e-01 88.2% 29.5%
3929202 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.53 38.0 3.10e-01 80.4% 74.3%
3607857 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 42.0 3.54e-01 98.0% 49.0%
3614906 4.26.1.8 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Saf4_Yju2 0.52 40.0 3.72e-01 88.2% 65.7%
3643549 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.51 42.0 3.77e-01 100.0% 70.0%
3592422 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.51 37.0 2.30e-01 82.4% 60.3%
3551009 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.51 42.0 2.84e-01 96.1% 25.6%
3483489 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 43.0 3.86e-01 100.0% 73.3%
4931072 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.51 43.0 3.96e-01 100.0% 78.6%
4946993 4.1.1.479 beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.51 42.0 3.91e-01 100.0% 81.4%
3948467 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.51 41.0 3.90e-01 100.0% 87.7%
4997059 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.50 42.0 3.82e-01 100.0% 78.7%