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MZ436628.1__QXN68023.1__X__00040

Bact-Vir

MZ436628.1__QXN68023.1__X__00040

Identity

Accession:
MZ436628 ↗
Kingdom:
phage

Quality

96.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microcystis_phage_Mwe-Yong1

TaxID: 2852111

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-59
PDB
Domain cluster: rep: IMGVR_UViG_3300045988_180032-3300045988-Ga0495776_068882_40536_40739__D2-66
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.77 65.0 5.86e-01 100.0% 69.6%
1sgvA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.73 52.0 5.10e-01 100.0% 69.8%
3zv0C01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.72 60.0 4.40e-01 100.0% 34.9%
1q7hA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.71 58.0 5.13e-01 100.0% 61.6%
3vseA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.71 58.0 5.53e-01 100.0% 76.8%
2cx0A02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.68 56.0 5.03e-01 100.0% 65.1%
1iq8A04 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.67 54.0 4.97e-01 100.0% 67.9%
2b78A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.67 52.0 5.06e-01 100.0% 77.3%
1sqwA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.66 54.0 4.83e-01 100.0% 63.9%
3c0kA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.66 54.0 5.09e-01 100.0% 76.1%
2as0A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.65 53.0 5.05e-01 100.0% 77.1%
1cseI00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.63 39.0 3.80e-01 98.3% 57.1%
6z9uA01 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.58 38.0 3.46e-01 94.8% 48.2%
4aibA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.57 39.0 3.09e-01 100.0% 34.4%
1r0vA01 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.56 40.0 3.68e-01 98.3% 57.1%
5gjnA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.56 48.0 3.62e-01 100.0% 38.6%
2kksA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.56 40.0 3.07e-01 100.0% 31.5%
2nvaA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.52 43.0 3.46e-01 100.0% 46.1%
8os3A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.49e-01 87.9% 100.0%
6n2aA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.51 42.0 3.14e-01 100.0% 36.0%
4hizA01 3.30.750.60 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › Endosialidase, N-terminal extension domain 0.51 31.0 3.47e-01 96.6% 83.3%
4xg1A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.51 41.0 3.09e-01 100.0% 38.6%
1a3wA01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.51 41.0 3.08e-01 93.1% 65.8%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4972120 1.1.9.35 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.89 72.0 5.66e-01 100.0% 45.5%
4972117 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.88 74.0 5.73e-01 100.0% 44.2%
4998591 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.83 74.0 5.43e-01 98.3% 44.8%
4953076 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.81 69.0 5.41e-01 100.0% 45.8%
4950776 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.77 65.0 4.92e-01 100.0% 39.3%
4932684 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.77 64.0 5.85e-01 100.0% 70.7%
4932437 1.1.9.14 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 0.76 65.0 5.79e-01 100.0% 67.1%
4582116 1.1.9.11 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.75 59.0 5.74e-01 100.0% 78.5%
4635070 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.74 61.0 5.58e-01 100.0% 69.3%
4453731 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.73 61.0 5.05e-01 100.0% 53.0%
4504459 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.73 60.0 5.53e-01 100.0% 70.7%
2834726 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.72 60.0 4.55e-01 100.0% 39.6%
4601432 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.72 59.0 5.40e-01 100.0% 69.3%
5037242 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.72 60.0 4.75e-01 100.0% 46.1%
4187980 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.72 59.0 4.93e-01 100.0% 53.0%
4958010 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.72 58.0 5.33e-01 100.0% 69.3%
5053836 1.1.9.6 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.71 58.0 5.06e-01 100.0% 58.9%
4943587 1.1.9.54 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PAPS_reduct 0.71 59.0 5.19e-01 100.0% 62.4%
4946184 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.71 58.0 5.30e-01 100.0% 67.5%
5071049 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.71 58.0 5.34e-01 100.0% 70.7%
4963284 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.70 58.0 5.36e-01 100.0% 71.6%
4584469 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.70 55.0 5.25e-01 100.0% 72.9%
4977465 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.70 56.0 4.94e-01 100.0% 58.9%
4990786 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.70 57.0 4.23e-01 100.0% 35.3%
4303964 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.69 55.0 5.22e-01 100.0% 74.3%
3886687 1.1.9.6 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.69 57.0 4.96e-01 100.0% 58.9%
4167855 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.69 56.0 5.19e-01 100.0% 70.7%
4101732 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.69 58.0 5.47e-01 100.0% 78.6%
4949034 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.68 56.0 4.18e-01 100.0% 34.8%
5024403 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.68 56.0 5.06e-01 100.0% 66.3%
4958559 1.1.9.6 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.68 55.0 5.02e-01 100.0% 66.3%
5054829 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.68 54.0 5.04e-01 100.0% 70.7%
4943450 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.67 56.0 4.94e-01 100.0% 63.5%
4996509 1.1.9.6 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.67 53.0 4.91e-01 96.6% 68.0%
4948219 1.1.9.54 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PAPS_reduct 0.66 59.0 5.43e-01 100.0% 92.0%
4299464 1.1.9.10 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB_C 0.64 53.0 4.93e-01 100.0% 73.3%
3500632 1.1.7.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Orn_DAP_Arg_deC 0.60 47.0 3.63e-01 100.0% 38.5%
4003425 1.1.7.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Orn_DAP_Arg_deC 0.54 47.0 3.32e-01 100.0% 31.7%
4948558 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 43.0 3.97e-01 100.0% 74.1%
4029261 321.1.1.4 ↗ a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N 0.52 40.0 2.65e-01 91.4% 88.4%
3655558 1.1.7.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Orn_DAP_Arg_deC 0.51 42.0 3.15e-01 100.0% 33.5%
3056597 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.50 44.0 3.47e-01 100.0% 79.4%
D2 high residues 63-127
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mp4A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 40.0 3.72e-01 84.6% 92.1%
4n5xA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 38.0 3.69e-01 78.5% 88.0%
2lssA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 37.0 3.63e-01 96.9% 70.0%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.50 37.0 3.44e-01 81.5% 62.2%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4983464 11.9.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › DUF2848 0.53 43.0 3.15e-01 100.0% 48.9%