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MZ447863.1QXN68085.1X__00049

Bact-Vir

MZ447863.1__QXN68085.1__X__00049

Identity

Accession:: MZ447863 ↗
Kingdom:: phage

Quality

84.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microcystis_phage_Mea-Yong924-1

TaxID: 2859073

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-86

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4fcyA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.62	35.0	3.63e-01	77.6%	57.7%
4nufA02	1.10.565.10	Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor	0.59	44.0	3.57e-01	81.2%	92.7%
4uw9A02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.58	40.0	4.13e-01	78.8%	74.7%
2of7A02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.55	38.0	3.27e-01	71.8%	90.0%
3qwlA03	1.10.472.80	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3	0.54	38.0	3.34e-01	75.3%	76.5%
3w6sC00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.53	43.0	3.30e-01	94.1%	58.7%
3dcfA02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.53	38.0	3.22e-01	76.5%	79.6%
3b0pA02	1.20.120.1460	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.52	33.0	3.55e-01	74.1%	74.7%
3iq0A00	3.40.1190.20	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase	0.51	38.0	2.64e-01	80.0%	27.7%
1gcvA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.51	41.0	3.57e-01	91.8%	97.1%
6arhA00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.51	35.0	2.49e-01	97.6%	21.0%

ECOD (18)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4316691	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.69	40.0	4.62e-01	82.4%	81.7%
3944499	6050.1.1.0 ↗	a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone	0.59	49.0	4.91e-01	100.0%	92.9%
3925368	2003.1.5.97 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_32	0.58	43.0	2.82e-01	81.2%	79.5%
3267835	284.1.3.1 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5	0.58	38.0	3.63e-01	97.6%	55.2%
3560901	601.19.1.20 ↗	alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Fy-3	0.56	38.0	3.97e-01	97.6%	80.0%
3857887	5094.1.1.11 ↗	a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › Fy-3	0.55	38.0	3.95e-01	97.6%	80.0%
3576492	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.55	37.0	3.65e-01	100.0%	64.4%
3905302	284.1.3.8 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › Fy-3	0.55	37.0	3.77e-01	97.6%	70.6%
3774738	7529.1.1.11 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362	0.54	37.0	3.75e-01	97.6%	70.6%
5059049	247.1.1.1 ↗	a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B	0.54	47.0	3.30e-01	100.0%	39.0%
3190506	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.53	37.0	3.85e-01	81.2%	77.5%
3399176	3525.1.1.1 ↗	alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET	0.53	28.0	3.15e-01	100.0%	66.2%
3929410	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.53	36.0	2.33e-01	70.6%	99.3%
3860525	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.53	37.0	2.60e-01	72.9%	88.1%
4179226	3171.1.1.1 ↗	alpha arrays › Nitrogenase gamma subunit N-terminal domain › Nitrogenase gamma subunit N-terminal domain › Nitrogenase gamma subunit N-terminal domain › DIMCO_N	0.51	37.0	3.79e-01	100.0%	81.2%
4991686	2498.1.1.10 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48	0.51	39.0	2.73e-01	82.4%	87.2%
4211428	106.1.1.1 ↗	alpha arrays › Globin-like › Globin-like › Globin-like › Globin	0.51	40.0	3.29e-01	88.2%	85.3%
3270794	609.1.1.1 ↗	alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › PARP_reg	0.50	37.0	3.26e-01	78.8%	69.2%

D2 medium residues 142-269

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2nsfA01	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.52	35.0	3.23e-01	77.3%	54.7%
5cofA00	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.50	36.0	3.32e-01	93.0%	55.2%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4013372	149.1.1.0 ↗	alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450	0.50	36.0	2.56e-01	75.0%	85.4%