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MZ447863.1__QXN68088.1__X__00052
Bact-VirMZ447863.1__QXN68088.1__X__00052
Identity
- Accession:
- MZ447863 ↗
- Kingdom:
- phage
Quality
43.3
mean pLDDT
Taxonomy
TaxID: 2859073
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-111
Domain cluster:
rep: KC821611.1__AGO47831.1__Phi46-1_gp20__00020__D3-107
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.77 | 48.0 | 5.17e-01 | 94.4% | 73.1% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.68 | 44.0 | 4.70e-01 | 86.1% | 76.1% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.68 | 39.0 | 4.50e-01 | 85.2% | 77.2% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.66 | 44.0 | 4.22e-01 | 93.5% | 58.4% |
| 2egvA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.62 | 37.0 | 4.47e-01 | 87.0% | 95.5% |
| 4g6iC02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 36.0 | 3.87e-01 | 86.1% | 64.9% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 44.0 | 4.53e-01 | 96.3% | 77.5% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.60 | 44.0 | 4.40e-01 | 92.6% | 75.2% |
| 3gdiA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 42.0 | 4.24e-01 | 73.1% | 89.2% |
| 4hh2C04 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 42.0 | 4.15e-01 | 75.9% | 88.9% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.57 | 34.0 | 3.95e-01 | 86.1% | 84.0% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.57 | 33.0 | 3.73e-01 | 96.3% | 76.2% |
| 3oloA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 42.0 | 4.16e-01 | 75.9% | 88.3% |
| 1jeyB02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.56 | 48.0 | 3.98e-01 | 96.3% | 91.0% |
| 3zugB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.56 | 48.0 | 4.41e-01 | 93.5% | 83.8% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.54 | 48.0 | 4.70e-01 | 95.4% | 94.8% |
| 6baoA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 42.0 | 3.87e-01 | 82.4% | 74.1% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.54 | 43.0 | 3.97e-01 | 87.0% | 80.6% |
| 1v9kA00 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.54 | 41.0 | 3.20e-01 | 79.6% | 41.9% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.54 | 39.0 | 3.67e-01 | 88.0% | 60.9% |
| 2oolA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 40.0 | 4.05e-01 | 77.8% | 87.9% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 3.91e-01 | 87.0% | 71.0% |
| 3aljA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.52 | 35.0 | 3.13e-01 | 88.9% | 48.7% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.52 | 43.0 | 4.35e-01 | 95.4% | 89.9% |
| 4kqdB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 41.0 | 4.08e-01 | 85.2% | 91.4% |
| 1d1jB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.51 | 41.0 | 3.79e-01 | 85.2% | 89.0% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 41.0 | 3.80e-01 | 87.0% | 69.3% |
| 3nhqA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 37.0 | 3.59e-01 | 75.9% | 77.3% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 35.0 | 3.12e-01 | 71.3% | 78.4% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 39.0 | 4.02e-01 | 84.3% | 89.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4105189 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.72 | 47.0 | 4.98e-01 | 93.5% | 74.7% |
| 4246480 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.70 | 45.0 | 4.80e-01 | 92.6% | 73.7% |
| 4204477 | 1.1.5.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF27476 | 0.70 | 50.0 | 5.30e-01 | 93.5% | 84.0% |
| 3947980 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.68 | 44.0 | 4.59e-01 | 92.6% | 71.0% |
| 4457262 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 47.0 | 4.67e-01 | 93.5% | 71.8% |
| None | — | 0.59 | 45.0 | 3.73e-01 | 79.6% | 55.1% | |
| 4028560 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.59 | 40.0 | 3.69e-01 | 70.4% | 71.3% |
| 3461468 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.58 | 37.0 | 3.65e-01 | 83.3% | 59.1% |
| 3614925 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.57 | 49.0 | 3.54e-01 | 96.3% | 57.8% |
| 4239442 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.57 | 42.0 | 3.21e-01 | 77.8% | 85.5% |
| 3744400 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.56 | 48.0 | 3.54e-01 | 96.3% | 60.4% |
| 3551510 | 60.1.2.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C | 0.56 | 48.0 | 3.49e-01 | 96.3% | 56.6% |
| 5007977 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.56 | 42.0 | 3.90e-01 | 78.7% | 74.1% |
| 2723791 | 60.1.2.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C | 0.56 | 48.0 | 3.49e-01 | 96.3% | 58.8% |
| 4951490 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.55 | 41.0 | 4.22e-01 | 76.9% | 100.0% |
| 4134441 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 42.0 | 4.00e-01 | 79.6% | 70.4% |
| 5008544 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.55 | 41.0 | 4.03e-01 | 77.8% | 88.7% |
| 3366352 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.55 | 40.0 | 4.35e-01 | 81.5% | 93.3% |
| 4519252 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.55 | 47.0 | 4.60e-01 | 91.7% | 91.3% |
| 5053325 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 39.0 | 3.92e-01 | 75.0% | 94.5% |
| 5006332 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 40.0 | 4.45e-01 | 75.9% | 97.6% |
| 4522783 | 101.1.2.715 ↗ | alpha arrays › HTH › HTH › winged helix domain › CheF-arch | 0.54 | 40.0 | 2.96e-01 | 77.8% | 55.7% |
| 5016214 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.54 | 39.0 | 3.16e-01 | 94.4% | 37.7% |
| 4938400 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.54 | 38.0 | 3.74e-01 | 73.1% | 92.2% |
| 5001593 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 41.0 | 3.81e-01 | 81.5% | 80.0% |
| 3382288 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.54 | 40.0 | 3.93e-01 | 93.5% | 73.0% |
| 4953666 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.53 | 43.0 | 3.91e-01 | 88.0% | 79.3% |
| 4954283 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.53 | 43.0 | 3.87e-01 | 88.0% | 68.7% |
| 5047353 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.53 | 39.0 | 3.76e-01 | 78.7% | 85.6% |
| 3290736 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.53 | 39.0 | 3.42e-01 | 76.9% | 72.3% |
| 5005723 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.52 | 41.0 | 3.05e-01 | 84.3% | 88.9% |
| 3288669 | 331.3.1.27 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 | 0.52 | 35.0 | 3.10e-01 | 99.1% | 46.3% |
| 3955095 | 881.1.1.8 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C | 0.52 | 46.0 | 3.82e-01 | 100.0% | 73.9% |
| 3956932 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.52 | 45.0 | 3.42e-01 | 96.3% | 63.8% |
| 4974776 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.51 | 41.0 | 3.76e-01 | 87.0% | 78.6% |
| 4954483 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 41.0 | 3.96e-01 | 87.0% | 75.2% |
| 4953273 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 42.0 | 3.85e-01 | 88.0% | 75.0% |
| 4974736 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 41.0 | 3.79e-01 | 88.0% | 79.3% |
| 4556248 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.51 | 41.0 | 3.11e-01 | 86.1% | 36.9% |
| 3964389 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 38.0 | 4.06e-01 | 90.7% | 89.5% |
| 2410020 | 881.1.1.4 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB | 0.51 | 45.0 | 4.12e-01 | 100.0% | 80.4% |
| 5018968 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.51 | 39.0 | 3.55e-01 | 91.7% | 58.7% |
| 4974235 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 41.0 | 3.56e-01 | 87.0% | 72.7% |
| 3388100 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.51 | 42.0 | 2.91e-01 | 92.6% | 54.6% |
D2
high
residues 514-656
D3
medium
residues 350-408