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MZ456352.1__QXN60135.1__KUA24_68__00068

Bact-Vir

MZ456352.1__QXN60135.1__KUA24_68__00068

Identity

Accession:
MZ456352 ↗
Kingdom:
phage

Quality

60.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_HNL01

TaxID: 2853169

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-101
PDB
D2 high residues 115-210
PDB
Domain cluster: rep: NC_025470.1__YP_009104113.1__S140_115__00112__D172-266
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hn7A00 2.40.50.650 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 43.0 4.60e-01 78.1% 92.9%
2ba0A03 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.56 43.0 4.64e-01 100.0% 95.2%
4g79A00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.54 47.0 4.24e-01 97.9% 93.3%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 41.0 3.05e-01 84.4% 46.5%
1st8A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 46.0 3.23e-01 100.0% 39.6%
2vszB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 43.0 4.10e-01 100.0% 78.6%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.51 39.0 3.48e-01 99.0% 55.7%
1foeC02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 3.09e-01 75.0% 61.5%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.50 38.0 3.01e-01 83.3% 49.8%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3920985 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.72 40.0 2.66e-01 79.2% 14.5%
3399365 9.2.1.10 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7044 0.62 39.0 3.77e-01 96.9% 55.5%
3436491 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.56 43.0 3.72e-01 83.3% 91.3%
3316409 868.1.1.0 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.55 40.0 3.08e-01 80.2% 34.1%
3830647 868.1.1.5 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 0.54 40.0 3.14e-01 80.2% 38.5%
3467163 868.1.1.5 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 0.53 40.0 3.08e-01 79.2% 36.2%
3969999 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.53 45.0 3.92e-01 92.7% 87.6%
3383213 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.52 47.0 3.32e-01 100.0% 34.1%
3640089 206.1.1.34 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase_fungal 0.52 42.0 2.92e-01 86.5% 61.7%
3485537 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.51 47.0 2.91e-01 100.0% 18.8%
4990121 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.50 41.0 4.05e-01 90.6% 81.0%