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MZ496293.1__QXM18780.1__X__00039
Bact-VirMZ496293.1__QXM18780.1__X__00039
Identity
- Accession:
- MZ496293 ↗
- Kingdom:
- phage
Quality
88.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-119
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.63 | 40.0 | 4.75e-01 | 71.6% | 96.8% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 40.0 | 4.52e-01 | 97.9% | 87.3% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 41.0 | 4.34e-01 | 72.6% | 77.8% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.61 | 45.0 | 3.97e-01 | 86.3% | 53.7% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.61 | 44.0 | 4.36e-01 | 76.8% | 88.2% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.60 | 44.0 | 4.56e-01 | 83.2% | 83.3% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 46.0 | 3.86e-01 | 82.1% | 83.6% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.57 | 33.0 | 3.04e-01 | 75.8% | 44.2% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.57 | 42.0 | 4.12e-01 | 80.0% | 92.5% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.56 | 44.0 | 3.78e-01 | 84.2% | 80.6% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.56 | 44.0 | 3.77e-01 | 87.4% | 91.0% |
| 2rqlA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.56 | 40.0 | 4.09e-01 | 76.8% | 76.8% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 32.0 | 3.01e-01 | 76.8% | 45.0% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 39.0 | 4.13e-01 | 74.7% | 100.0% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.55 | 39.0 | 4.27e-01 | 93.7% | 100.0% |
| 3lm3A02 | 3.30.1120.110 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 41.0 | 4.00e-01 | 78.9% | 88.8% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 30.0 | 3.61e-01 | 83.2% | 83.3% |
| 2qg7B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 41.0 | 4.07e-01 | 96.8% | 75.2% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 32.0 | 3.76e-01 | 76.8% | 87.5% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.53 | 36.0 | 4.16e-01 | 83.2% | 98.6% |
| 2jo6A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.52 | 39.0 | 3.80e-01 | 80.0% | 84.5% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 37.0 | 3.92e-01 | 96.8% | 84.5% |
| 1huxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 38.0 | 3.59e-01 | 80.0% | 89.9% |
| 4ihzA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 39.0 | 3.37e-01 | 85.3% | 93.3% |
| 1v0fA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 45.0 | 3.05e-01 | 98.9% | 85.0% |
| 2ch5A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 39.0 | 3.44e-01 | 83.2% | 88.0% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 34.0 | 3.74e-01 | 78.9% | 88.0% |
| 1shyB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 44.0 | 2.89e-01 | 98.9% | 42.7% |
| 7ue1B01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 37.0 | 3.25e-01 | 76.8% | 86.1% |
| 4u6bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 44.0 | 3.04e-01 | 98.9% | 56.9% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 38.0 | 3.53e-01 | 83.2% | 96.1% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4975431 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.72 | 56.0 | 5.75e-01 | 82.1% | 86.7% |
| 3964101 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.69 | 43.0 | 5.22e-01 | 70.5% | 100.0% |
| 3763789 | 220.1.1.186 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CAYP2 | 0.62 | 55.0 | 4.79e-01 | 97.9% | 91.7% |
| 3438388 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.61 | 46.0 | 4.13e-01 | 83.2% | 56.3% |
| 5035423 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.61 | 34.0 | 3.64e-01 | 73.7% | 62.4% |
| 3827531 | 844.1.1.5 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › DUF3527 | 0.60 | 44.0 | 3.21e-01 | 75.8% | 55.9% |
| 5014253 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 38.0 | 4.31e-01 | 70.5% | 88.6% |
| 3281221 | 3435.1.1.5 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › DUF6119 | 0.59 | 47.0 | 3.77e-01 | 89.5% | 82.5% |
| 3894482 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.58 | 42.0 | 3.07e-01 | 76.8% | 26.9% |
| 3511200 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.57 | 41.0 | 4.30e-01 | 84.2% | 82.4% |
| 1680012 | 3425.2.1.0 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain | 0.57 | 44.0 | 3.06e-01 | 85.3% | 54.8% |
| 3890928 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.56 | 41.0 | 3.42e-01 | 77.9% | 92.8% |
| None | — | 0.56 | 51.0 | 3.01e-01 | 98.9% | 19.4% | |
| 3322652 | 844.1.1.5 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › DUF3527 | 0.56 | 42.0 | 3.09e-01 | 80.0% | 57.7% |
| 4025141 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.56 | 48.0 | 3.84e-01 | 97.9% | 89.5% |
| 3929256 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.56 | 41.0 | 3.65e-01 | 78.9% | 91.4% |
| 3333962 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.56 | 50.0 | 3.34e-01 | 98.9% | 37.8% |
| None | — | 0.56 | 50.0 | 3.00e-01 | 98.9% | 20.6% | |
| 4008203 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 50.0 | 2.99e-01 | 98.9% | 20.5% |
| 5049183 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 44.0 | 4.17e-01 | 88.4% | 73.7% |
| 4937319 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.55 | 48.0 | 3.49e-01 | 97.9% | 78.8% |
| 3452696 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 49.0 | 3.39e-01 | 98.9% | 37.8% |
| 3319085 | 4099.1.1.27 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › DUF7806 | 0.54 | 39.0 | 3.87e-01 | 74.7% | 85.0% |
| 4965137 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 44.0 | 3.94e-01 | 87.4% | 66.7% |
| 3199763 | 220.1.1.202 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N | 0.54 | 47.0 | 4.32e-01 | 95.8% | 84.0% |
| 818 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.54 | 42.0 | 3.84e-01 | 84.2% | 95.4% |
| 3364063 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.54 | 41.0 | 3.62e-01 | 81.1% | 91.4% |
| 3904660 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.54 | 41.0 | 3.22e-01 | 83.2% | 38.0% |
| 3640540 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.53 | 48.0 | 3.07e-01 | 100.0% | 33.5% |
| 3546354 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.53 | 47.0 | 3.14e-01 | 100.0% | 85.8% |
| 3386946 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.53 | 42.0 | 3.70e-01 | 88.4% | 87.2% |
| 4969870 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.53 | 37.0 | 2.57e-01 | 73.7% | 29.8% |
| 3638525 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 46.0 | 3.05e-01 | 98.9% | 40.5% |
| 3686359 | 5.1.4.155 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 | 0.52 | 46.0 | 3.07e-01 | 97.9% | 41.3% |
| 4954483 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 40.0 | 3.65e-01 | 92.6% | 63.2% |
| 4026437 | 5.1.3.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CyRPA | 0.51 | 47.0 | 3.20e-01 | 100.0% | 41.2% |
| 4890877 | 220.1.1.14 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom | 0.51 | 40.0 | 3.52e-01 | 82.1% | 71.4% |
| 4883226 | 5.1.3.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin | 0.51 | 38.0 | 3.84e-01 | 96.8% | 79.6% |
| 3640334 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.51 | 39.0 | 3.63e-01 | 82.1% | 84.2% |
| 3423079 | 5.1.4.231 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FBA_3 | 0.50 | 45.0 | 3.15e-01 | 98.9% | 44.5% |
| 2336349 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.50 | 37.0 | 3.84e-01 | 96.8% | 83.1% |
| 3427602 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.50 | 46.0 | 3.16e-01 | 100.0% | 34.9% |
| 3232904 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.50 | 34.0 | 2.62e-01 | 98.9% | 29.8% |
| 3554160 | 5.1.4.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EPTP | 0.50 | 45.0 | 3.06e-01 | 97.9% | 40.9% |