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MZ501055.1__QXV76825.1__bas68_0030__00030

Bact-Vir

MZ501055.1__QXV76825.1__bas68_0030__00030

Identity

Accession:
MZ501055 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autotranscriptaviridae› Berlinvirus› Escherichia_phage_CarlSpitteler

TaxID: 2852039

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-64
PDB
Domain cluster: rep: MN013082.1__QEG12935.1__SIB_34__00034__D80-137
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26857.1 best Phage_T7_4_7 39.6 8.60e-10 100.0% 42.5%
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.87 65.0 6.69e-01 100.0% 83.3%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 66.0 7.05e-01 91.2% 92.0%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 57.0 6.15e-01 84.2% 89.6%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.76 62.0 6.42e-01 100.0% 94.4%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 56.0 5.71e-01 91.2% 83.9%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 66.0 5.90e-01 100.0% 75.9%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 62.0 5.95e-01 93.0% 89.1%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 65.0 6.42e-01 98.2% 98.3%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 63.0 4.84e-01 98.2% 49.6%
1v29B02 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.69 62.0 5.14e-01 98.2% 86.6%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.69 62.0 4.98e-01 100.0% 57.8%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.68 55.0 5.47e-01 91.2% 96.6%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 4.95e-01 93.0% 70.2%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.68 59.0 5.84e-01 96.5% 91.7%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 53.0 5.05e-01 94.7% 83.6%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.63 54.0 3.90e-01 100.0% 89.7%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 48.0 4.77e-01 94.7% 81.7%
4l1nA00 2.40.128.660 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 0.63 47.0 3.51e-01 84.2% 47.8%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.83e-01 94.7% 83.3%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 54.0 4.58e-01 100.0% 72.9%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 52.0 4.63e-01 94.7% 78.3%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 46.0 4.04e-01 86.0% 96.7%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.51e-01 96.5% 79.5%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 44.0 3.70e-01 87.7% 90.4%
2fujA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 42.0 3.37e-01 80.7% 93.2%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 42.0 3.13e-01 82.5% 76.9%
2x0qA01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.56 40.0 3.17e-01 78.9% 36.8%
4owkE00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 47.0 3.66e-01 98.2% 98.5%
3m7nA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 42.0 3.68e-01 80.7% 94.2%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 40.0 3.38e-01 77.2% 50.0%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.53 42.0 2.99e-01 91.2% 88.2%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.52 37.0 3.43e-01 78.9% 66.7%
1h6lA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 42.0 2.63e-01 91.2% 60.3%
1xxmC01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.52 36.0 3.41e-01 75.4% 58.1%
4ggtB00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.51 42.0 3.54e-01 96.5% 95.3%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.36e-01 91.2% 67.3%
3dkzA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 38.0 3.04e-01 82.5% 80.8%
2pimA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 37.0 2.93e-01 80.7% 76.5%
3hduA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 37.0 2.79e-01 80.7% 77.0%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4640515 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.89 64.0 6.80e-01 94.7% 86.0%
4280256 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.87 63.0 6.66e-01 98.2% 86.0%
4550511 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.87 56.0 6.25e-01 86.0% 84.4%
603 4.1.1.62 ↗ beta barrels › SH3 › SH3 › SH3 › DUF1811 0.87 65.0 6.74e-01 100.0% 84.9%
3609597 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.83 60.0 5.89e-01 93.0% 71.7%
3976834 4.1.1.156 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2158 0.79 58.0 6.15e-01 89.5% 88.0%
4024915 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.79 67.0 6.35e-01 98.2% 78.5%
3601070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 65.0 6.22e-01 91.2% 92.3%
3174977 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.78 67.0 5.56e-01 100.0% 55.8%
3264808 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.77 65.0 6.04e-01 94.7% 72.9%
3595169 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 68.0 6.32e-01 96.5% 91.4%
3181766 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.77 62.0 5.60e-01 94.7% 65.3%
4403216 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.77 62.0 5.75e-01 94.7% 70.0%
3486329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 64.0 6.12e-01 98.2% 78.5%
3576940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 68.0 4.44e-01 100.0% 24.9%
3625264 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 68.0 5.65e-01 100.0% 58.9%
1545879 4.1.1.120 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_16 0.75 63.0 5.08e-01 89.5% 100.0%
3598285 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.08e-01 93.0% 78.6%
3703933 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.75 63.0 6.03e-01 89.5% 81.5%
4655719 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.75 63.0 5.35e-01 91.2% 70.0%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 63.0 6.00e-01 100.0% 80.0%
4014881 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 61.0 6.06e-01 89.5% 88.3%
3890362 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.30e-01 82.5% 85.7%
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 66.0 4.33e-01 98.2% 39.1%
3576443 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 64.0 5.96e-01 98.2% 97.1%
3240407 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.72 61.0 5.66e-01 91.2% 80.0%
3833012 4.1.1.239 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.72 63.0 5.48e-01 96.5% 74.1%
3712672 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 61.0 5.42e-01 93.0% 96.2%
3789647 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 64.0 4.58e-01 98.2% 43.2%
4932493 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 64.0 6.17e-01 100.0% 87.7%
3473407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 63.0 5.71e-01 100.0% 85.3%
4929472 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.13e-01 93.0% 73.8%
3342793 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 62.0 4.24e-01 100.0% 29.5%
3363448 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.69 62.0 5.40e-01 98.2% 74.1%
3356605 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 59.0 5.03e-01 93.0% 81.1%
3729690 4.1.1.170 ↗ beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.69 61.0 5.14e-01 98.2% 85.3%
3224924 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 51.0 3.83e-01 84.2% 33.3%
3592075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.41e-01 100.0% 85.9%
1759629 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.69 57.0 4.63e-01 98.2% 48.6%
4961138 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 57.0 5.23e-01 93.0% 73.3%
3948255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 61.0 4.66e-01 100.0% 48.5%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 61.0 5.14e-01 100.0% 80.0%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.31e-01 98.2% 81.2%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 61.0 5.41e-01 100.0% 95.0%
4555816 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.05e-01 96.5% 71.8%
3182025 4.1.1.475 ↗ beta barrels › SH3 › SH3 › SH3 › PF26640 0.67 55.0 4.31e-01 96.5% 51.1%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 60.0 5.25e-01 100.0% 80.0%
3893808 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.66 59.0 3.65e-01 100.0% 29.1%
3812766 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 59.0 5.50e-01 100.0% 88.6%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 56.0 4.89e-01 94.7% 77.6%
4220126 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 55.0 4.87e-01 96.5% 72.9%
3645395 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.65 59.0 5.22e-01 100.0% 92.5%
4622062 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 56.0 3.68e-01 98.2% 42.1%
3520308 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.69e-01 98.2% 92.6%
4581369 4.1.1.166 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2314 0.63 56.0 4.58e-01 100.0% 72.4%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 53.0 4.70e-01 100.0% 64.7%
4004815 4.1.1.166 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2314 0.63 54.0 4.29e-01 100.0% 74.0%
3996279 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.63 55.0 4.96e-01 100.0% 77.5%
3708283 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 54.0 4.75e-01 98.2% 84.7%
4990538 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 49.0 3.89e-01 91.2% 93.5%
3968432 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 46.0 3.76e-01 82.5% 76.2%
5048425 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.51e-01 96.5% 98.8%
4500970 2007.1.2.42 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › PF29770 0.59 42.0 2.93e-01 75.4% 51.4%
3665228 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 35.0 4.08e-01 70.2% 87.5%
4962256 101.1.2.937 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25943 0.58 46.0 3.79e-01 89.5% 65.5%
4137471 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 43.0 3.49e-01 80.7% 63.6%
3288884 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 43.0 3.58e-01 86.0% 50.5%
5060723 5.1.9.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain in ABC toxin B component › FG-GAP_3 0.55 41.0 2.53e-01 84.2% 28.1%
3433350 5.3.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.55 37.0 2.96e-01 73.7% 75.0%
3486056 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 39.0 2.98e-01 82.5% 35.1%
4570706 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.53 43.0 2.65e-01 96.5% 83.7%
4430780 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.52 38.0 2.83e-01 78.9% 69.0%
3604264 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 39.0 3.34e-01 87.7% 66.0%