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MZ501061.1__QXV77883.1__bas59_0189__00189
Bact-VirMZ501061.1__QXV77883.1__bas59_0189__00189
Identity
- Accession:
- MZ501061 ↗
- Kingdom:
- phage
Quality
77.9
mean pLDDT
Taxonomy
TaxID: 2852031
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 182-237
Domain cluster:
rep: NC_028835.1__YP_009201837.1__CL2_42__00042__D139-181
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7wq5A01 | 3.30.730.10 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain | 0.90 | 69.0 | 6.82e-01 | 80.4% | 81.0% |
| 4wxaA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.74 | 52.0 | 4.51e-01 | 73.2% | 88.1% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.74 | 50.0 | 4.17e-01 | 71.4% | 98.0% |
| 2k3iA01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 50.0 | 4.41e-01 | 71.4% | 91.8% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.72 | 51.0 | 4.66e-01 | 75.0% | 98.7% |
| 3nyiA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.72 | 55.0 | 4.17e-01 | 83.9% | 47.4% |
| 6a80A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.71 | 54.0 | 4.13e-01 | 91.1% | 37.2% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 40.0 | 2.92e-01 | 82.1% | 22.7% |
| 1pzxA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.69 | 52.0 | 4.03e-01 | 82.1% | 91.0% |
| 5o5cB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.68 | 49.0 | 3.78e-01 | 76.8% | 78.1% |
| 2l6mA00 | 3.30.160.400 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.68 | 53.0 | 4.44e-01 | 87.5% | 64.4% |
| 2dt8A02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.68 | 51.0 | 3.91e-01 | 82.1% | 49.2% |
| 2q88A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.67 | 54.0 | 4.11e-01 | 91.1% | 37.6% |
| 6yiiA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.67 | 47.0 | 3.13e-01 | 75.0% | 48.3% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.67 | 53.0 | 4.95e-01 | 91.1% | 70.0% |
| 3l60A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.66 | 55.0 | 3.70e-01 | 94.6% | 37.3% |
| 1xt8A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.66 | 53.0 | 3.84e-01 | 89.3% | 33.1% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.66 | 49.0 | 4.10e-01 | 80.4% | 97.9% |
| 2kc5A01 | 3.30.1460.40 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › [NiFe]-hydrogenase assembly chaperone, HybE | 0.65 | 47.0 | 3.65e-01 | 80.4% | 88.2% |
| 2bzlA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.64 | 46.0 | 3.02e-01 | 80.4% | 69.4% |
| 4ykiA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 48.0 | 3.60e-01 | 83.9% | 31.3% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 48.0 | 3.77e-01 | 83.9% | 38.0% |
| 2ec4A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 47.0 | 3.47e-01 | 83.9% | 67.8% |
| 2rc8A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 48.0 | 3.46e-01 | 92.9% | 27.2% |
| 3tqfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 48.0 | 3.45e-01 | 83.9% | 86.1% |
| 4f3sA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 51.0 | 3.92e-01 | 92.9% | 38.6% |
| 3htxA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 42.0 | 3.94e-01 | 75.0% | 75.0% |
| 3u1nB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.61 | 45.0 | 2.77e-01 | 78.6% | 60.7% |
| 3n7cA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 45.0 | 3.62e-01 | 80.4% | 42.6% |
| 2aeuA01 | 3.90.1150.70 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.60 | 41.0 | 3.06e-01 | 71.4% | 70.5% |
| 5cygB00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.58 | 41.0 | 2.59e-01 | 75.0% | 85.4% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.58 | 45.0 | 3.55e-01 | 83.9% | 72.2% |
| 3wa7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 46.0 | 2.71e-01 | 87.5% | 16.7% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.57 | 43.0 | 3.51e-01 | 80.4% | 95.1% |
| 1b8pA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.57 | 39.0 | 2.79e-01 | 73.2% | 63.4% |
| 5nr1A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 39.0 | 3.25e-01 | 75.0% | 70.8% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.55 | 37.0 | 3.80e-01 | 71.4% | 87.3% |
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.26e-01 | 75.0% | 98.0% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.17e-01 | 87.5% | 40.8% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 46.0 | 3.89e-01 | 100.0% | 74.8% |
| 1zhvA00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.54 | 39.0 | 3.05e-01 | 80.4% | 88.8% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 40.0 | 3.55e-01 | 83.9% | 75.3% |
| 5gkoA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.57e-01 | 82.1% | 57.3% |
| 7xinA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 37.0 | 3.09e-01 | 78.6% | 75.2% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 39.0 | 3.28e-01 | 83.9% | 47.9% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.52 | 37.0 | 3.28e-01 | 78.6% | 51.1% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.50 | 43.0 | 2.77e-01 | 98.2% | 31.5% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 38.0 | 3.01e-01 | 83.9% | 41.3% |
| 4indA01 | 2.60.120.1320 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 37.0 | 2.83e-01 | 83.9% | 77.4% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965886 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.94 | 65.0 | 7.19e-01 | 71.4% | 88.9% |
| 3813458 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.93 | 73.0 | 7.71e-01 | 82.1% | 94.0% |
| 3468885 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.92 | 70.0 | 6.13e-01 | 80.4% | 58.7% |
| 3831192 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.91 | 69.0 | 5.90e-01 | 80.4% | 54.1% |
| 3380188 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.90 | 69.0 | 6.98e-01 | 80.4% | 83.6% |
| 4024768 | 330.3.1.7 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like › AP2 | 0.87 | 65.0 | 6.57e-01 | 78.6% | 92.7% |
| 3661849 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.86 | 65.0 | 6.26e-01 | 80.4% | 71.4% |
| 4027687 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.86 | 63.0 | 6.36e-01 | 76.8% | 90.9% |
| 3425673 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.84 | 59.0 | 6.18e-01 | 73.2% | 84.0% |
| 3331331 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.82 | 76.0 | 6.15e-01 | 100.0% | 77.0% |
| 3440839 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.82 | 71.0 | 5.76e-01 | 92.9% | 86.0% |
| 3827127 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.82 | 75.0 | 6.17e-01 | 100.0% | 83.2% |
| 3334492 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.81 | 74.0 | 6.54e-01 | 100.0% | 87.5% |
| 3682141 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.81 | 65.0 | 6.81e-01 | 85.7% | 96.0% |
| 4027686 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.77 | 56.0 | 5.70e-01 | 76.8% | 92.7% |
| 4029439 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.76 | 61.0 | 5.69e-01 | 85.7% | 73.9% |
| 4028791 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.76 | 60.0 | 6.10e-01 | 85.7% | 90.9% |
| 3271101 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.76 | 54.0 | 4.76e-01 | 75.0% | 92.5% |
| 3942150 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.74 | 64.0 | 5.55e-01 | 100.0% | 67.8% |
| 4944239 | 301.13.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain | 0.73 | 56.0 | 4.28e-01 | 83.9% | 50.0% |
| 3959171 | 4029.1.1.0 ↗ | a+b duplicates or obligate multimers › SSH domain in siroheme synthase middle domains-like › SSH domain in siroheme synthase middle domains-like › SSH domain in siroheme synthase middle domains-like | 0.71 | 48.0 | 5.24e-01 | 73.2% | 100.0% |
| 4946414 | 301.13.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain | 0.70 | 54.0 | 4.20e-01 | 83.9% | 52.8% |
| 4134161 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.67 | 49.0 | 3.80e-01 | 80.4% | 47.4% |
| 3678841 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 51.0 | 4.42e-01 | 83.9% | 54.1% |
| 3319893 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.66 | 54.0 | 4.41e-01 | 89.3% | 49.0% |
| 3700687 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.66 | 47.0 | 3.00e-01 | 73.2% | 38.4% |
| 3568614 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.66 | 58.0 | 3.65e-01 | 98.2% | 76.2% |
| 3700429 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.64 | 53.0 | 4.10e-01 | 100.0% | 41.4% |
| 3968902 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.63 | 45.0 | 3.03e-01 | 78.6% | 32.9% |
| 3988478 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.63 | 50.0 | 4.24e-01 | 89.3% | 61.2% |
| 4025434 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.63 | 55.0 | 4.93e-01 | 98.2% | 70.7% |
| 4426811 | 7523.1.1.4 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 | 0.63 | 47.0 | 3.57e-01 | 89.3% | 32.4% |
| 3299579 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.63 | 49.0 | 4.53e-01 | 83.9% | 71.4% |
| 3668817 | 4099.1.1.2 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 | 0.62 | 46.0 | 3.25e-01 | 80.4% | 27.0% |
| 3404649 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.62 | 49.0 | 3.58e-01 | 89.3% | 32.1% |
| 3038115 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.62 | 46.0 | 3.55e-01 | 80.4% | 83.3% |
| 3974750 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.62 | 47.0 | 3.02e-01 | 83.9% | 32.1% |
| 5048696 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 3.05e-01 | 73.2% | 36.5% |
| 4420323 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.61 | 46.0 | 4.01e-01 | 83.9% | 98.9% |
| 3614289 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 2.81e-01 | 82.1% | 11.6% |
| 3591115 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.60 | 46.0 | 3.88e-01 | 85.7% | 87.0% |
| 3669022 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 47.0 | 3.97e-01 | 94.6% | 51.6% |
| 4986859 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.59 | 49.0 | 3.19e-01 | 96.4% | 62.0% |
| 3429998 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.58 | 43.0 | 2.68e-01 | 78.6% | 21.1% |
| 3349197 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.58 | 43.0 | 2.76e-01 | 78.6% | 25.0% |
| 3616729 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 49.0 | 4.04e-01 | 98.2% | 53.8% |
| 3970771 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.57 | 50.0 | 3.47e-01 | 100.0% | 55.4% |
| 3954346 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.57 | 40.0 | 2.60e-01 | 76.8% | 27.1% |
| 3946113 | 241.7.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N | 0.56 | 44.0 | 3.56e-01 | 83.9% | 97.1% |
| 5074130 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.56 | 48.0 | 3.18e-01 | 98.2% | 63.9% |
| 3983196 | 2498.1.1.57 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › LPD1 | 0.55 | 49.0 | 3.26e-01 | 100.0% | 53.6% |
| 2755642 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.55 | 46.0 | 3.14e-01 | 94.6% | 61.5% |
| 4051351 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.54 | 45.0 | 3.04e-01 | 98.2% | 95.4% |
| 4215095 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.54 | 44.0 | 2.82e-01 | 100.0% | 82.6% |
| 4585964 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.54 | 45.0 | 3.16e-01 | 94.6% | 76.8% |
| 3710998 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.54 | 48.0 | 2.79e-01 | 100.0% | 73.1% |
| 4541289 | 2002.1.1.154 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_1 | 0.53 | 44.0 | 2.74e-01 | 100.0% | 22.9% |
| 4437052 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.53 | 46.0 | 3.41e-01 | 100.0% | 78.0% |
| 3581467 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.52 | 44.0 | 3.35e-01 | 92.9% | 90.0% |
| 4149276 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.52 | 44.0 | 3.17e-01 | 94.6% | 77.6% |
| 4955694 | 2498.2.1.0 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain | 0.52 | 42.0 | 3.27e-01 | 89.3% | 92.8% |
| 4505972 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 45.0 | 2.75e-01 | 94.6% | 22.5% |
| 4025452 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 39.0 | 3.03e-01 | 83.9% | 39.1% |
| 5003912 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 37.0 | 2.82e-01 | 82.1% | 94.4% |
| 3891108 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 38.0 | 3.14e-01 | 83.9% | 84.3% |
| 4955420 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.50 | 38.0 | 2.43e-01 | 80.4% | 25.4% |
D2
medium
residues 4-111
Domain cluster:
rep: ON602723.1__UVX28986.1__A1p_00054__00054__D3-97
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13392.13 best | HNH_3 | 27.3 | 3.00e-06 | 42.6% | 95.7% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.76 | 68.0 | 6.87e-01 | 100.0% | 97.2% |
| 1a73A00 | 3.90.75.10 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A | 0.61 | 54.0 | 4.72e-01 | 97.2% | 85.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3586841 | 378.1.1.7 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 | 0.73 | 66.0 | 6.52e-01 | 97.2% | 98.3% |
| 3539740 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.60 | 56.0 | 5.36e-01 | 100.0% | 88.0% |