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MZ501262.1__QZA69583.1__035JT004_84__00084

Bact-Vir

MZ501262.1__QZA69583.1__035JT004_84__00084

Identity

Accession:
MZ501262 ↗
Kingdom:
phage

Quality

91.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Nitunavirus› Bacillus_phage_035JT004

TaxID: 2869564

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-53
PDB
Domain cluster: representative
CATH (68)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i2lA01 2.10.70.50 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.95 84.0 8.22e-01 93.9% 94.2%
4ew5A00 3.10.450.160 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr 0.75 47.0 3.67e-01 83.7% 30.4%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.74 54.0 3.23e-01 77.6% 22.5%
4zovB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.73 53.0 3.15e-01 77.6% 23.3%
5hqgA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.72 54.0 3.24e-01 79.6% 26.5%
2ymsA00 2.40.128.630 Mainly Beta › Beta Barrel › Lipocalin › 0.72 52.0 3.83e-01 77.6% 57.3%
1lj5A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.71 52.0 3.60e-01 77.6% 98.1%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.71 52.0 3.09e-01 77.6% 22.3%
3ijcA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.71 52.0 3.08e-01 77.6% 32.5%
1h4iA00 2.140.10.10 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily 0.70 51.0 2.87e-01 77.6% 26.1%
4u1eI00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.70 52.0 3.14e-01 79.6% 26.1%
1kb0A01 2.140.10.10 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily 0.70 50.0 2.83e-01 77.6% 26.6%
4q1vA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.69 50.0 2.87e-01 77.6% 10.9%
4q6lA00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.69 53.0 3.86e-01 83.7% 88.9%
4u7aA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 50.0 2.98e-01 77.6% 23.0%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 51.0 3.53e-01 77.6% 40.3%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 51.0 3.04e-01 79.6% 15.6%
6az1g01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 50.0 3.06e-01 77.6% 34.7%
2dlxA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.68 46.0 3.47e-01 71.4% 77.0%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 49.0 2.82e-01 77.6% 14.5%
5h1kB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 50.0 3.00e-01 79.6% 26.6%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.67 49.0 2.94e-01 77.6% 29.2%
1su1A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.67 52.0 3.47e-01 83.7% 31.0%
7sulB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 49.0 2.99e-01 79.6% 34.4%
4nsxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 48.0 2.93e-01 77.6% 24.7%
3vgzC00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 48.0 2.91e-01 77.6% 22.9%
7uhyA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 49.0 2.99e-01 79.6% 17.1%
4ifdF00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.65 49.0 3.27e-01 83.7% 60.1%
5xyig01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 48.0 2.97e-01 79.6% 31.7%
3facA00 2.170.150.70 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › 0.64 49.0 3.87e-01 85.7% 71.6%
5c98B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.64 50.0 3.60e-01 83.7% 100.0%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.64 46.0 3.06e-01 77.6% 36.4%
1genA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.64 46.0 3.03e-01 77.6% 19.0%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.63 51.0 3.06e-01 89.8% 90.5%
3bpqD00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.62 50.0 4.17e-01 89.8% 89.5%
3a27A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 41.0 2.70e-01 73.5% 45.7%
1opoA02 2.60.40.1780 Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein 0.59 45.0 3.59e-01 83.7% 92.2%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 49.0 3.72e-01 100.0% 96.2%
1jmxB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 47.0 2.90e-01 93.9% 22.1%
5uv6A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 3.92e-01 95.9% 51.7%
2l1sA00 3.10.450.160 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr 0.58 45.0 3.85e-01 100.0% 51.8%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.57 43.0 3.07e-01 85.7% 82.9%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 49.0 3.63e-01 100.0% 76.3%
4izxA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 46.0 3.54e-01 100.0% 92.8%
4cvbA00 2.140.10.10 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily 0.57 48.0 2.77e-01 100.0% 28.6%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 46.0 2.71e-01 91.8% 25.6%
3sd2A01 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 39.0 3.37e-01 71.4% 94.8%
1hdhA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 41.0 3.58e-01 77.6% 64.9%
1z52A02 3.30.412.10 Alpha Beta › 2-Layer Sandwich › Proaerolysin; Chain A, domain 2 › Proaerolysin, chain A, domain 2 0.57 47.0 3.30e-01 98.0% 90.2%
2j8hA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 3.65e-01 89.8% 56.7%
7ob9B02 3.90.1800.10 Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain 0.56 40.0 3.14e-01 89.8% 36.3%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.56 45.0 4.18e-01 100.0% 69.8%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 49.0 3.70e-01 100.0% 78.7%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.55 49.0 3.27e-01 100.0% 89.5%
2jsnA00 2.30.42.40 Mainly Beta › Roll › Pdz3 Domain › 0.55 42.0 3.54e-01 91.8% 62.5%
2aujD03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 41.0 3.91e-01 93.9% 67.7%
2czrA01 3.40.1350.70 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › TBP-interacting protein, N-terminal domain 0.54 43.0 3.53e-01 98.0% 71.7%
4nkbB02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 38.0 3.31e-01 79.6% 65.6%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.64e-01 100.0% 57.4%
4bv4R00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.53 40.0 2.39e-01 89.8% 20.5%
2eaqA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 42.0 3.58e-01 91.8% 71.9%
7kcgA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 45.0 3.38e-01 100.0% 96.2%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 44.0 3.93e-01 98.0% 79.7%
5llwA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 37.0 3.07e-01 75.5% 98.9%
6mjjC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.37e-01 98.0% 53.5%
4j4hA01 3.40.50.12150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 41.0 3.10e-01 91.8% 72.6%
2iepA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.27e-01 100.0% 44.8%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 40.0 2.54e-01 100.0% 95.2%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3413068 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.74 54.0 3.24e-01 77.6% 26.6%
4890852 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.72 52.0 3.16e-01 77.6% 22.1%
3450849 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.71 59.0 4.41e-01 91.8% 89.2%
3332664 5.1.11.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 0.71 51.0 2.97e-01 77.6% 19.0%
3707595 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 52.0 2.83e-01 77.6% 11.0%
3578914 5.1.5.170 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › B-prop_COPA_B_2nd 0.71 51.0 3.16e-01 77.6% 16.7%
3513009 5.1.12.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains 0.70 53.0 3.23e-01 81.6% 43.3%
3494813 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 51.0 3.88e-01 77.6% 52.7%
4029119 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 49.0 2.95e-01 75.5% 18.9%
3792973 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 52.0 3.10e-01 79.6% 24.1%
4027260 5.1.4.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD 0.70 53.0 3.21e-01 79.6% 26.3%
3888295 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.69 51.0 3.01e-01 77.6% 15.9%
3560257 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.69 50.0 2.99e-01 77.6% 25.6%
1289472 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.69 50.0 2.89e-01 77.6% 11.6%
3643107 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.69 49.0 2.91e-01 77.6% 29.4%
3754040 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 50.0 3.00e-01 79.6% 22.2%
3875841 5.1.4.619 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF27600, PF27601 0.69 50.0 2.75e-01 79.6% 9.6%
3712069 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 49.0 2.96e-01 77.6% 21.4%
4517523 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.68 47.0 3.74e-01 73.5% 44.0%
3230015 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 49.0 2.84e-01 77.6% 18.9%
3621078 5.1.4.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.68 50.0 2.89e-01 77.6% 13.3%
3263889 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 48.0 2.79e-01 77.6% 19.2%
3585370 5.1.3.112 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40_2 0.67 49.0 3.10e-01 77.6% 31.2%
3194822 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 49.0 2.81e-01 77.6% 13.1%
4021971 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.67 47.0 3.11e-01 75.5% 31.9%
3998928 5.1.5.236 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR3_1st 0.67 49.0 3.23e-01 77.6% 24.6%
3185844 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.67 45.0 3.99e-01 75.5% 48.6%
4000029 5.1.4.139 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.67 48.0 2.90e-01 77.6% 22.8%
5082482 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.67 55.0 4.93e-01 100.0% 80.0%
3703208 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 49.0 3.00e-01 79.6% 51.9%
3705295 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 49.0 2.99e-01 77.6% 22.3%
3755410 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.66 48.0 2.82e-01 77.6% 16.6%
3849084 5.1.11.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 0.66 47.0 2.76e-01 77.6% 35.7%
3706244 5.1.4.379 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_2 0.66 49.0 2.89e-01 79.6% 87.5%
3852280 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.66 48.0 2.93e-01 77.6% 36.4%
3743579 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.66 49.0 2.97e-01 79.6% 15.4%
5054848 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.66 49.0 3.82e-01 77.6% 45.0%
4169890 5.1.11.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta_propel 0.65 50.0 2.83e-01 83.7% 91.7%
3202612 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.65 47.0 2.83e-01 77.6% 16.5%
3824511 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.65 56.0 4.22e-01 98.0% 94.2%
3507867 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.64 50.0 3.88e-01 85.7% 73.6%
3999896 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 46.0 4.47e-01 77.6% 78.2%
3733350 2004.1.1.686 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, DEAD, Helicase_C 0.64 40.0 2.27e-01 73.5% 5.1%
3594305 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 46.0 2.89e-01 77.6% 26.8%
3597338 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 45.0 3.00e-01 77.6% 17.6%
3618540 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.64 46.0 4.05e-01 79.6% 54.7%
4230177 2.8.1.2 ↗ beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 0.63 52.0 4.63e-01 91.8% 80.0%
3659833 2007.5.1.17 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase 0.63 47.0 3.03e-01 83.7% 32.9%
1779588 2003.1.10.9 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Lant_dehydr_N 0.63 47.0 3.74e-01 81.6% 95.0%
3672734 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.63 54.0 4.12e-01 98.0% 93.0%
3207028 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.63 52.0 3.06e-01 91.8% 99.2%
5002533 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.62 52.0 3.99e-01 89.8% 44.8%
5031337 375.8.1.1 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B 0.62 46.0 4.92e-01 83.7% 100.0%
3598746 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 51.0 3.03e-01 91.8% 26.8%
3744425 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.62 51.0 2.98e-01 91.8% 96.9%
2391944 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.61 45.0 3.74e-01 81.6% 44.3%
3920058 708.1.2.10 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 0.61 49.0 3.57e-01 93.9% 31.2%
4029773 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 51.0 2.99e-01 93.9% 98.4%
3175626 331.1.1.13 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C 0.59 45.0 4.05e-01 87.8% 90.7%
3581426 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.59 46.0 4.41e-01 89.8% 91.7%
3524423 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 40.0 3.90e-01 91.8% 63.6%
3665959 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.59 52.0 3.08e-01 100.0% 97.3%
3493489 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.59 44.0 4.46e-01 98.0% 82.0%
3347231 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.59 49.0 3.63e-01 93.9% 50.8%
2485200 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 51.0 3.28e-01 100.0% 79.8%
4049910 375.14.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) 0.58 48.0 4.99e-01 98.0% 100.0%
3677778 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.58 50.0 3.03e-01 93.9% 95.1%
3961639 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.58 42.0 3.97e-01 77.6% 96.7%
3872517 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 51.0 3.27e-01 100.0% 99.2%
3786078 109.4.1.1764 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 0.58 47.0 2.72e-01 93.9% 19.4%
5016731 5.1.4.559 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_propel 0.58 46.0 2.68e-01 91.8% 23.7%
5064802 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 44.0 3.64e-01 83.7% 50.0%
3718492 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 41.0 2.70e-01 79.6% 23.6%
119254 3155.1.1.1 ↗ a+b two layers › Uncharacterized protein yohN › Uncharacterized protein yohN › Uncharacterized protein yohN › RcnB 0.58 45.0 3.85e-01 100.0% 51.8%
5033222 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.57 41.0 3.30e-01 77.6% 41.0%
5038830 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.57 44.0 3.53e-01 85.7% 48.0%
4292319 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.57 48.0 2.74e-01 98.0% 15.3%
4946341 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.57 44.0 2.85e-01 87.8% 27.8%
4968405 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.56 43.0 3.40e-01 87.8% 42.7%
3932406 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.56 44.0 2.77e-01 91.8% 73.0%
3251123 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.56 41.0 3.42e-01 85.7% 94.0%
4463837 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.55 43.0 3.46e-01 89.8% 42.9%
4974477 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.55 41.0 3.54e-01 87.8% 52.2%
3740947 5.1.4.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.54 43.0 2.59e-01 91.8% 16.8%
3265211 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 46.0 3.56e-01 100.0% 63.2%
4031135 6043.1.1.3 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N 0.52 41.0 3.56e-01 93.9% 58.8%
3905352 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 38.0 2.23e-01 87.8% 12.8%
D2 high residues 69-127
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 48.0 4.02e-01 84.7% 52.4%
1kbaA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.62 43.0 4.21e-01 93.2% 66.7%
1gvzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 44.0 3.56e-01 84.7% 59.5%
2jwyA01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.55 42.0 3.27e-01 83.1% 48.9%
7dfqA01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 42.0 3.33e-01 83.1% 51.6%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 41.0 3.22e-01 84.7% 42.2%
3liuA01 2.60.40.3160 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 3.34e-01 84.7% 42.4%
4rdlA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.53 40.0 3.43e-01 84.7% 59.8%
1gtdA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.53 41.0 3.77e-01 86.4% 98.8%
1ksiA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.52 41.0 2.53e-01 100.0% 13.0%
1n26A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.52e-01 100.0% 50.5%
5nfiB02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.32e-01 94.9% 46.6%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 43.0 2.72e-01 100.0% 77.2%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 34.0 2.77e-01 71.2% 60.7%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4598948 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.65 45.0 4.43e-01 93.2% 66.2%
3412870 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 47.0 4.39e-01 83.1% 80.0%
4534824 382.1.1.7 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type 0.61 42.0 3.76e-01 86.4% 50.6%
1296875 382.1.1.7 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type 0.59 39.0 3.76e-01 93.2% 58.3%
3224264 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.57 47.0 4.11e-01 93.2% 74.4%
3244836 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 43.0 3.41e-01 86.4% 76.3%
2129789 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.56 43.0 4.15e-01 84.7% 76.8%
5002155 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 48.0 4.03e-01 98.3% 57.0%
3817104 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.55 40.0 2.87e-01 86.4% 23.3%
4216863 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 4.18e-01 100.0% 70.6%
1727258 11.14.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domains in STT3 › Ig-like domains in STT3 › OST_P2 0.54 47.0 3.57e-01 100.0% 58.6%
3957374 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.54 45.0 4.28e-01 93.2% 81.4%
5079140 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 38.0 3.16e-01 76.3% 79.6%
3886671 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.53 40.0 3.03e-01 86.4% 51.9%
4456766 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 42.0 3.43e-01 96.6% 45.4%
3682019 2003.1.1.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.51 34.0 2.16e-01 71.2% 17.4%
3235066 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.51 40.0 3.14e-01 89.8% 52.6%
4041632 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.50 37.0 2.81e-01 79.7% 61.4%