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MZ501264.1__QZA70097.1__274BB002_28__00026
Bact-VirMZ501264.1__QZA70097.1__274BB002_28__00026
Identity
- Accession:
- MZ501264 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-106
Domain cluster:
rep: IMGVR_UViG_3300005298_000040-3300005298-Ga0071330_107091546__D3-94
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kluA01 | 3.30.2220.30 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › | 0.70 | 63.0 | 5.99e-01 | 100.0% | 90.9% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 30.0 | 3.08e-01 | 97.8% | 51.1% |
| 2jiiA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 41.0 | 3.28e-01 | 89.1% | 88.0% |
| 1z1nX02 | 3.90.10.10 | Alpha Beta › Alpha-Beta Complex › Cytochrome C3 › Cytochrome C3 | 0.50 | 29.0 | 2.72e-01 | 85.9% | 41.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077628 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.74 | 62.0 | 6.42e-01 | 92.4% | 100.0% |
| 5039151 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.73 | 65.0 | 6.37e-01 | 98.9% | 98.0% |
| 4537543 | 3103.1.1.4 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_9 | 0.61 | 54.0 | 4.92e-01 | 100.0% | 91.2% |
| 3947952 | 3103.1.1.3 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_15 | 0.59 | 53.0 | 5.18e-01 | 98.9% | 93.9% |
| 3925526 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 31.0 | 3.17e-01 | 100.0% | 57.8% |
| 3277618 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.52 | 26.0 | 2.88e-01 | 100.0% | 58.7% |
| 3261491 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.52 | 40.0 | 2.62e-01 | 84.8% | 36.9% |
D2
medium
residues 120-197
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bg5B00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.71 | 54.0 | 3.99e-01 | 80.8% | 81.9% |
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.69 | 56.0 | 4.08e-01 | 87.2% | 64.5% |
| 1bh9B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.67 | 47.0 | 4.48e-01 | 76.9% | 62.9% |
| 1sz2A02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.57 | 45.0 | 3.33e-01 | 85.9% | 39.0% |
| 5eoxB03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 42.0 | 3.57e-01 | 84.6% | 67.2% |
| 3zliA02 | 1.20.58.1370 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 37.0 | 3.57e-01 | 74.4% | 67.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3597736 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.69 | 50.0 | 4.90e-01 | 76.9% | 72.9% |
| 5077040 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.67 | 50.0 | 4.37e-01 | 78.2% | 88.7% |
| 4642603 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.66 | 41.0 | 3.15e-01 | 76.9% | 28.6% |
| 5049726 | 873.1.1.13 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase | 0.65 | 42.0 | 3.35e-01 | 85.9% | 32.3% |
| 2074163 | 2484.1.1.32 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C | 0.60 | 44.0 | 3.09e-01 | 76.9% | 46.9% |
| 2530142 | 6171.1.1.3 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › KDM5_C-hel | 0.52 | 38.0 | 4.09e-01 | 85.9% | 88.4% |