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MZ501264.1__QZA70130.1__274BB002_61__00060

Bact-Vir

MZ501264.1__QZA70130.1__274BB002_61__00060

Identity

Accession:
MZ501264 ↗
Kingdom:
phage

Quality

70.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 43-95
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ra8A01 2.20.140.10 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain 0.80 62.0 5.50e-01 83.0% 68.9%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.79 64.0 4.72e-01 88.7% 100.0%
3qktD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 68.0 4.15e-01 96.2% 34.6%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.79 62.0 4.51e-01 84.9% 99.3%
6wqbA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.78 54.0 3.96e-01 73.6% 49.3%
1xf8A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.78 58.0 4.08e-01 81.1% 48.5%
2qzuA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.77 64.0 5.55e-01 94.3% 63.5%
3edfA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.77 55.0 4.79e-01 75.5% 100.0%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.77 58.0 5.09e-01 83.0% 61.7%
4h0oA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.76 50.0 3.40e-01 77.4% 20.2%
1tiqB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.76 55.0 3.82e-01 77.4% 51.2%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.75 66.0 4.61e-01 100.0% 38.6%
1k8kD01 3.30.1460.20 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.74 62.0 4.44e-01 92.5% 69.5%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.74 62.0 4.39e-01 92.5% 33.3%
4h0aA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.74 55.0 3.44e-01 81.1% 56.2%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.74 58.0 4.69e-01 86.8% 76.5%
1cgtA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.72 53.0 4.42e-01 79.2% 93.6%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.72 62.0 4.41e-01 94.3% 51.9%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.72 57.0 3.87e-01 88.7% 88.4%
3owcB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.71 49.0 3.47e-01 73.6% 50.0%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.71 56.0 3.33e-01 86.8% 25.9%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.70 55.0 4.74e-01 90.6% 53.6%
6i7sG01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.70 59.0 3.80e-01 94.3% 30.9%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.70 55.0 3.86e-01 84.9% 70.4%
2r7hB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.69 49.0 3.57e-01 77.4% 50.9%
3frmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.69 50.0 3.24e-01 79.2% 30.2%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 54.0 3.71e-01 86.8% 53.4%
2v7sA00 3.30.2030.20 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.68 50.0 3.53e-01 83.0% 24.9%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.68 58.0 4.94e-01 98.1% 59.6%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 47.0 4.32e-01 73.6% 63.4%
5itqA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.68 57.0 4.40e-01 100.0% 90.9%
4ftxB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.67 51.0 3.93e-01 84.9% 36.7%
6fmeA03 2.20.220.10 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › alpha-Amylases 0.66 57.0 5.43e-01 98.1% 93.5%
8ornD01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.66 58.0 4.05e-01 100.0% 39.8%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.65 49.0 3.32e-01 81.1% 87.0%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.65 53.0 4.15e-01 92.5% 52.5%
3bgtA01 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.65 57.0 3.75e-01 100.0% 76.2%
2aj6A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 47.0 3.71e-01 81.1% 70.8%
2mhgA00 2.20.130.30 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 0.64 46.0 4.20e-01 79.2% 89.3%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.64 47.0 4.09e-01 83.0% 51.1%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.63 53.0 3.73e-01 96.2% 31.5%
1wthA02 3.10.450.190 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 47.0 3.90e-01 98.1% 43.1%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 54.0 4.09e-01 100.0% 53.4%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.62 54.0 4.33e-01 96.2% 50.0%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 54.0 4.14e-01 100.0% 56.6%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 3.51e-01 94.3% 54.4%
3h7jA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 45.0 3.65e-01 84.9% 91.8%
1qu0C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 3.48e-01 100.0% 57.4%
4e2gC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 43.0 3.42e-01 94.3% 91.3%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4998507 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.84 65.0 6.50e-01 86.8% 81.5%
3990496 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.83 72.0 6.55e-01 96.2% 77.1%
4672450 210.1.1.5 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.82 67.0 4.40e-01 88.7% 67.3%
3597339 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.81 61.0 3.82e-01 83.0% 16.5%
1034013 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.80 63.0 5.49e-01 84.9% 66.7%
3793430 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.80 64.0 5.28e-01 98.1% 49.5%
None 0.77 69.0 3.91e-01 100.0% 32.4%
5042381 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.77 67.0 3.95e-01 96.2% 28.5%
5047049 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.77 68.0 3.81e-01 98.1% 18.5%
3972316 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.77 54.0 5.02e-01 90.6% 60.0%
3218632 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.76 69.0 5.67e-01 100.0% 73.4%
3519579 295.1.1.20 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Intu_longin_3 0.76 57.0 5.00e-01 98.1% 53.8%
3600206 241.6.1.0 a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits 0.76 67.0 4.56e-01 96.2% 74.3%
3929502 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.76 65.0 5.40e-01 96.2% 64.9%
3219425 5.1.3.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 0.76 61.0 4.62e-01 88.7% 42.4%
4959571 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.75 60.0 3.85e-01 88.7% 79.6%
3990136 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.75 54.0 3.96e-01 77.4% 51.4%
224047 6043.1.1.3 a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N 0.74 52.0 4.83e-01 73.6% 59.1%
1157731 6043.1.1.3 a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N 0.74 52.0 4.54e-01 73.6% 49.4%
4972588 2004.1.1.293 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.74 64.0 3.92e-01 100.0% 16.0%
3903662 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.74 59.0 5.11e-01 90.6% 61.2%
3238369 12.1.1.88 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF5386 0.73 58.0 5.82e-01 96.2% 86.8%
5022798 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.73 61.0 3.50e-01 92.5% 11.6%
3234981 633.23.1.4 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.72 57.0 3.83e-01 90.6% 21.9%
4243201 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.71 62.0 4.21e-01 96.2% 43.8%
3743052 5.1.4.78 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta 0.71 62.0 3.59e-01 96.2% 72.4%
3597540 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.71 55.0 3.34e-01 84.9% 12.9%
3440815 5.1.11.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_AT5G49610-like 0.71 58.0 3.56e-01 92.5% 29.4%
3227515 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.71 60.0 4.50e-01 94.3% 67.4%
3995220 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 59.0 4.16e-01 92.5% 46.3%
5052460 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.70 53.0 3.21e-01 83.0% 17.5%
4082107 7089.1.1.3 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › MmoD 0.70 52.0 4.77e-01 84.9% 61.4%
3597350 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.70 59.0 5.12e-01 96.2% 84.3%
3603731 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 58.0 4.29e-01 94.3% 60.0%
4031110 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 54.0 4.15e-01 86.8% 36.8%
1833186 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.69 50.0 3.65e-01 79.2% 51.0%
134104 9.1.1.22 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3642 0.68 58.0 4.94e-01 98.1% 59.6%
3925491 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.67 55.0 3.64e-01 90.6% 22.3%
3813186 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 55.0 3.26e-01 92.5% 21.3%
5008718 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.66 55.0 3.25e-01 96.2% 23.3%
4646256 2004.1.1.997 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15, AAA_23, AAA_27 0.66 55.0 3.18e-01 96.2% 19.3%
4998670 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.66 59.0 4.86e-01 98.1% 57.8%
3229011 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.65 57.0 4.17e-01 100.0% 52.4%
3223873 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.64 56.0 3.91e-01 100.0% 62.2%
3335974 3304.1.1.2 a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N 0.64 56.0 4.15e-01 100.0% 55.7%
3583988 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.63 51.0 4.12e-01 92.5% 67.3%
3398825 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.63 54.0 3.82e-01 100.0% 57.8%
119302 3146.1.1.0 a+b complex topology › gH main domain › gH main domain › gH main domain 0.63 53.0 3.29e-01 96.2% 16.9%
3389900 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.62 52.0 3.64e-01 98.1% 52.6%
1269291 10.1.1.1 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.62 51.0 3.58e-01 96.2% 54.7%
1769854 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.61 49.0 3.88e-01 92.5% 84.3%
3512368 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.60 51.0 3.73e-01 100.0% 52.7%
4256361 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.57 47.0 3.18e-01 98.1% 60.4%