Back to structures

MZ501267.1__QZA70580.1__AH04_98__00097

Bact-Vir

MZ501267.1__QZA70580.1__AH04_98__00097

Identity

Accession:
MZ501267 ↗
Kingdom:
phage

Quality

75.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 41-86_101-168
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4lgvD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.59 48.0 3.69e-01 88.6% 80.0%
3nctA00 3.40.50.11880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Plasmid SOS inhibition protein 0.58 49.0 4.65e-01 100.0% 76.6%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.57 37.0 3.85e-01 87.7% 69.4%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.55 43.0 4.30e-01 88.6% 80.2%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.55 37.0 4.26e-01 98.2% 100.0%
2wqlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 44.0 4.05e-01 90.4% 84.9%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.51 33.0 2.98e-01 73.7% 47.4%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3604446 2004.1.1.480 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 0.67 47.0 2.90e-01 72.8% 21.6%
3228525 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.61 54.0 5.52e-01 98.2% 100.0%
3286246 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 44.0 4.60e-01 75.4% 90.4%
3964222 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.59 42.0 3.76e-01 79.8% 50.0%
3508100 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.56 49.0 4.65e-01 99.1% 90.7%
3591236 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 39.0 2.44e-01 72.8% 33.8%
5028953 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.56 39.0 4.28e-01 98.2% 92.2%
222972 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.55 37.0 4.09e-01 94.7% 87.6%
2485676 292.3.1.1 a+b two layers › RIP/Polo-box domain › TipC soluble domain › TipC soluble domain › TipC 0.52 44.0 3.82e-01 93.0% 79.7%
3583444 9.1.1.12 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.52 40.0 4.06e-01 83.3% 96.5%
3969556 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.50 42.0 3.64e-01 90.4% 77.1%