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MZ503612.1__QYC52345.1__X__00016

Bact-Vir

MZ503612.1__QYC52345.1__X__00016

Identity

Accession:
MZ503612 ↗
Kingdom:
phage

Quality

93.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 81-207
PDB
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.68 28.0 4.27e-01 85.0% 94.1%
3ieeA02 1.20.58.820 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Uncharacterised protein PF12889, C-terminal DUF3829 0.67 39.0 4.27e-01 94.5% 69.9%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 46.0 5.22e-01 85.8% 98.9%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 48.0 5.15e-01 85.8% 90.6%
3nvoB02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.65 39.0 4.08e-01 78.0% 65.5%
5lbmA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.64 40.0 4.84e-01 84.3% 96.4%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 47.0 5.04e-01 86.6% 89.0%
2zdiC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 51.0 4.84e-01 85.8% 79.7%
3bk2A03 3.10.20.580 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.62 31.0 3.47e-01 92.1% 58.6%
6tqfA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.61 46.0 3.20e-01 85.8% 25.3%
2p92A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.61 32.0 3.71e-01 78.7% 69.5%
2jx0A00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.60 38.0 3.76e-01 92.9% 59.5%
3etvA01 1.10.287.3290 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 36.0 4.32e-01 89.8% 91.7%
1fxkC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 47.0 4.66e-01 85.8% 89.5%
1w36C04 1.10.486.10 Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 0.58 45.0 3.81e-01 81.1% 88.0%
5dicA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.58 29.0 3.03e-01 93.7% 48.7%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 27.0 3.56e-01 70.1% 82.4%
4n4nB00 3.90.640.100 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.57 27.0 3.79e-01 73.2% 100.0%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.56 32.0 3.27e-01 83.5% 57.9%
6o7uc01 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.56 44.0 3.92e-01 98.4% 57.4%
6n6qD00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.54 41.0 2.85e-01 80.3% 81.4%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.53 31.0 3.78e-01 99.2% 90.2%
1qviA01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.52 38.0 3.99e-01 75.6% 94.8%
3natA01 3.40.50.11250 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 0.52 36.0 3.45e-01 97.6% 60.5%
4ax2A01 1.20.120.1620 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.52 31.0 3.22e-01 89.0% 63.5%
1x04A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.51 46.0 3.98e-01 100.0% 83.5%
1vyiA00 1.20.120.820 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain 0.50 34.0 3.61e-01 100.0% 77.5%
1xttB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 35.0 2.94e-01 71.7% 43.8%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 36.0 3.50e-01 74.0% 78.7%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3518978 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.75 48.0 5.66e-01 97.6% 91.1%
3985490 192.2.1.5 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF4376 0.75 63.0 6.44e-01 89.0% 93.5%
3808578 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.75 42.0 5.33e-01 74.0% 94.6%
3979390 192.2.1.5 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF4376 0.72 62.0 6.28e-01 96.1% 94.4%
3783976 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.70 49.0 5.65e-01 82.7% 100.0%
3265214 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.68 47.0 4.99e-01 85.8% 78.3%
3482328 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.68 46.0 4.96e-01 84.3% 81.9%
4029803 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.66 49.0 4.87e-01 85.8% 75.4%
3413217 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.66 48.0 5.03e-01 85.8% 83.5%
4025655 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.65 46.0 5.21e-01 84.3% 97.9%
3710532 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.65 48.0 5.20e-01 86.6% 93.3%
4381440 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.65 47.0 4.92e-01 85.8% 83.5%
60305 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.64 47.0 5.10e-01 86.6% 91.5%
4017372 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.64 47.0 4.97e-01 86.6% 84.3%
5050732 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.64 46.0 4.76e-01 85.8% 79.2%
3579472 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.64 46.0 4.57e-01 85.0% 72.3%
3593339 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.64 46.0 4.87e-01 85.8% 83.5%
3712081 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.64 46.0 4.95e-01 85.8% 87.3%
4025072 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.63 47.0 4.93e-01 85.8% 85.2%
3202986 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 46.0 4.71e-01 85.8% 76.8%
3550136 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 46.0 4.78e-01 85.0% 81.7%
3939311 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.63 45.0 4.79e-01 85.0% 85.5%
4271212 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 46.0 4.75e-01 86.6% 78.9%
3935332 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 45.0 4.56e-01 85.8% 73.8%
3930150 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.63 50.0 3.75e-01 95.3% 35.7%
3718200 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.62 47.0 4.76e-01 85.8% 80.0%
4181293 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 45.0 4.82e-01 85.8% 87.3%
3630462 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 50.0 4.89e-01 86.6% 85.0%
3690513 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 46.0 4.52e-01 85.8% 73.7%
3441615 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.60 45.0 3.83e-01 85.8% 47.6%
3590185 601.19.1.0 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.60 45.0 4.04e-01 99.2% 55.1%
3810835 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.59 40.0 3.79e-01 98.4% 56.8%
4160852 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 48.0 4.66e-01 85.8% 81.2%
3771989 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 48.0 4.76e-01 87.4% 88.1%
3396714 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 47.0 4.51e-01 85.8% 92.4%
4112182 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 46.0 4.77e-01 84.3% 89.8%
4075008 633.21.1.18 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom 0.57 40.0 3.65e-01 88.2% 54.5%
4954729 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.57 49.0 3.07e-01 92.9% 35.9%
3457354 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 46.0 4.41e-01 85.8% 93.8%
4385210 633.21.1.18 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom 0.57 42.0 3.68e-01 93.7% 52.4%
3364928 2007.2.3.9 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase 0.56 44.0 3.12e-01 83.5% 80.0%
3809697 5069.1.1.55 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF1218 0.55 41.0 3.61e-01 85.8% 51.3%
4987009 3837.1.1.1 alpha bundles › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › DUF6847 0.55 40.0 3.79e-01 84.3% 64.0%
3297656 601.1.2.68 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DUF1218 0.55 43.0 4.00e-01 98.4% 65.5%
3208120 633.23.1.22 alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.54 41.0 3.81e-01 96.1% 63.9%
3717848 2007.2.3.9 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase 0.54 42.0 2.58e-01 81.1% 52.4%
3666832 4177.2.1.4 alpha duplicates or obligate multimers › BAR/IMD domain-like › Inhibitor of kappaB kinase beta dimerization domain › Inhibitor of kappaB kinase beta dimerization domain › ATG17_like 0.54 46.0 3.42e-01 95.3% 67.0%
4023956 3871.1.1.1 alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN 0.53 44.0 4.39e-01 99.2% 86.2%
4026519 3871.1.1.1 alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN 0.53 41.0 4.03e-01 94.5% 76.3%
3967370 620.1.1.2 alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB 0.53 46.0 4.26e-01 94.5% 77.5%
3367265 5069.1.1.55 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF1218 0.52 42.0 3.78e-01 98.4% 61.1%
3380863 2007.2.3.9 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase 0.52 41.0 2.57e-01 84.3% 41.2%
4811459 3281.1.1.2 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N 0.52 45.0 3.16e-01 94.5% 54.4%
3575665 2004.1.1.17 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.51 46.0 3.06e-01 98.4% 58.4%
3181391 5050.1.1.2 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 0.51 45.0 2.98e-01 99.2% 88.4%
3847882 2004.1.1.17 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.51 46.0 2.82e-01 100.0% 55.2%
3617674 2004.1.1.17 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.51 46.0 2.85e-01 100.0% 55.7%
3518708 2004.1.1.17 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.51 46.0 2.90e-01 100.0% 56.9%
3655146 221.1.2.0 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif 0.51 25.0 2.88e-01 84.3% 62.1%
3974474 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.51 31.0 3.53e-01 71.7% 84.4%
3276496 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 45.0 2.73e-01 100.0% 48.6%
3923603 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.50 44.0 3.37e-01 99.2% 45.9%
3275078 6166.1.1.1 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.50 36.0 3.04e-01 74.0% 70.0%
4020403 5050.1.1.2 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 0.50 41.0 2.88e-01 89.8% 86.9%
D2 medium residues 2-78
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqpA00 4.10.400.20 Few Secondary Structures › Irregular › Low-density Lipoprotein Receptor › 0.60 30.0 3.55e-01 90.9% 70.0%