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MZ503613.1__QYC52421.1__X__00016

Bact-Vir

MZ503613.1__QYC52421.1__X__00016

Identity

Accession:
MZ503613 ↗
Kingdom:
phage

Quality

87.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Solobacterium_phage_SMO_1P

TaxID: 2861055

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-49
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ficB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.89 81.0 5.18e-01 100.0% 63.2%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.79 71.0 6.64e-01 100.0% 91.2%
3besR03 6.10.140.1480 Special › Helix non-globular › Helix Hairpins › 0.76 66.0 6.30e-01 100.0% 83.9%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.74 60.0 5.20e-01 100.0% 87.8%
6lo8F01 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.72 58.0 5.09e-01 87.2% 66.7%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.72 62.0 5.57e-01 100.0% 97.0%
1u7lA02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.70 60.0 4.04e-01 100.0% 78.7%
2cazC00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.69 56.0 5.26e-01 100.0% 75.0%
1iuqA01 1.10.1200.50 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal 0.69 57.0 4.95e-01 95.7% 64.5%
4hb1A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.69 54.0 5.54e-01 100.0% 90.9%
5uiyA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.68 59.0 4.51e-01 97.9% 93.5%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.67 56.0 4.91e-01 100.0% 68.8%
1sg6A02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.66 49.0 3.34e-01 100.0% 20.8%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 51.0 4.32e-01 100.0% 53.3%
1sg7A00 1.10.1740.70 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB 0.63 47.0 4.06e-01 80.9% 54.7%
4ev6A03 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.63 54.0 5.08e-01 100.0% 81.0%
1onfA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 55.0 3.62e-01 100.0% 42.6%
3hmfA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.61 52.0 3.99e-01 100.0% 100.0%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.58 50.0 3.48e-01 100.0% 28.2%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3418848 5076.2.1.10 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 0.84 74.0 4.45e-01 100.0% 34.0%
3989094 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.77 67.0 5.90e-01 100.0% 67.1%
5039649 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.76 65.0 4.79e-01 95.7% 78.3%
4213046 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.75 66.0 5.97e-01 100.0% 84.6%
3952753 150.7.1.1 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE › PE 0.75 59.0 5.18e-01 91.5% 81.3%
3756047 192.29.1.243 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Fy-3 0.74 63.0 5.17e-01 100.0% 53.3%
3930451 386.1.1.10 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › MAT1 0.69 55.0 5.14e-01 89.4% 71.7%
4639996 150.7.1.1 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE › PE 0.69 56.0 4.76e-01 100.0% 64.4%
3282873 5042.1.1.1 ↗ extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA 0.69 54.0 5.09e-01 95.7% 96.8%
5075111 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.69 60.0 4.30e-01 100.0% 32.6%
3462586 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.66 51.0 5.20e-01 91.5% 95.6%
4356636 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.63 50.0 4.43e-01 91.5% 60.0%
3588113 5042.1.1.1 ↗ extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA 0.61 52.0 4.79e-01 100.0% 78.5%