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MZ503613.1__QYC52422.1__X__00002

Bact-Vir

MZ503613.1__QYC52422.1__X__00002

Identity

Accession:
MZ503613 ↗
Kingdom:
phage

Quality

88.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Solobacterium_phage_SMO_1P

TaxID: 2861055

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-90
PDB
Domain cluster: rep: OQ240257.1__WEU69557.1__X__00006__D10-84
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.74 60.0 5.17e-01 92.4% 57.0%
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 61.0 5.01e-01 96.2% 52.1%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 55.0 5.90e-01 91.1% 97.0%
4b43A01 1.10.10.2480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.70 47.0 5.03e-01 70.9% 80.9%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.70 62.0 5.33e-01 100.0% 62.7%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 59.0 5.82e-01 96.2% 88.2%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 61.0 5.70e-01 100.0% 80.8%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 56.0 5.83e-01 94.9% 97.2%
3gp4B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 60.0 5.13e-01 98.7% 60.0%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 61.0 5.37e-01 98.7% 70.8%
2jmlA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.62 51.0 5.13e-01 94.9% 90.1%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 34.0 2.85e-01 100.0% 30.9%
2p1aB01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.59 46.0 3.71e-01 96.2% 44.5%
1nvmA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.57 43.0 4.72e-01 92.4% 100.0%
4qqwA01 1.10.3210.30 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › 0.57 49.0 3.58e-01 100.0% 41.1%
1lj2A00 1.20.5.970 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Nonstructural RNA-binding protein 0.55 42.0 3.84e-01 83.5% 61.3%
2hoxA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 41.0 2.96e-01 78.5% 99.0%
3hjeA03 1.10.150.200 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 0.54 34.0 3.26e-01 72.2% 54.9%
4qmfD02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.54 43.0 4.17e-01 88.6% 94.6%
4iggB06 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.53 41.0 2.98e-01 83.5% 74.4%
4byfC01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.52 38.0 3.68e-01 79.7% 68.5%
2p8tA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.82e-01 83.5% 78.7%
1yjgA00 1.20.120.240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 0.52 38.0 2.99e-01 77.2% 90.4%
5cofA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.51 45.0 3.52e-01 98.7% 49.4%
1y1aA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 36.0 3.50e-01 74.7% 69.0%
2i53A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.50 44.0 3.64e-01 98.7% 58.0%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3838564 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.87 60.0 6.78e-01 70.9% 98.3%
4548007 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.85 59.0 5.73e-01 70.9% 68.2%
3958314 101.1.9.66 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_wHTH 0.82 51.0 5.94e-01 70.9% 89.1%
4995042 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.81 61.0 5.92e-01 77.2% 88.2%
5002797 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.81 55.0 6.17e-01 72.2% 91.7%
3587879 101.1.9.36 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.76 63.0 5.62e-01 93.7% 64.5%
4420911 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.74 59.0 4.85e-01 89.9% 48.9%
3974460 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.73 58.0 4.87e-01 91.1% 51.5%
3976015 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.73 59.0 5.89e-01 91.1% 86.3%
3278826 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.73 61.0 5.26e-01 96.2% 60.0%
3953197 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.72 58.0 5.45e-01 84.8% 96.8%
4520820 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 57.0 5.84e-01 89.9% 89.3%
4929856 101.1.9.18 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 0.71 63.0 6.05e-01 100.0% 88.9%
3288205 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.71 61.0 6.10e-01 94.9% 93.8%
3286117 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.71 60.0 5.17e-01 98.7% 59.2%
3281873 101.1.9.84 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.71 60.0 4.30e-01 94.9% 32.2%
1068666 101.1.9.18 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 0.70 62.0 5.76e-01 100.0% 80.0%
5007668 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.70 59.0 5.01e-01 96.2% 57.6%
3966930 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.70 57.0 5.10e-01 91.1% 63.6%
3961212 101.1.9.104 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Ad_Cy_reg 0.69 62.0 6.06e-01 100.0% 94.1%
3387406 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.69 62.0 5.65e-01 100.0% 76.2%
3943313 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.69 60.0 5.28e-01 96.2% 67.8%
3975516 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.68 58.0 5.26e-01 94.9% 70.5%
4674139 101.1.9.30 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.68 59.0 5.03e-01 97.5% 85.4%
3291218 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.68 57.0 4.84e-01 94.9% 56.2%
3974607 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.67 57.0 4.86e-01 94.9% 56.9%
3949463 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.67 58.0 5.22e-01 100.0% 69.6%
3290830 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.67 58.0 5.17e-01 97.5% 69.6%
3280706 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.67 56.0 5.59e-01 94.9% 92.5%
3279459 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.67 57.0 4.99e-01 96.2% 67.5%
3284690 3601.1.1.0 ↗ alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain 0.67 58.0 4.77e-01 100.0% 56.0%
282935 3601.1.1.1 ↗ alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg 0.66 59.0 4.42e-01 100.0% 42.3%
3972191 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.66 56.0 4.65e-01 93.7% 52.9%
3274594 101.1.9.30 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.66 57.0 4.28e-01 97.5% 53.0%
3284779 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.66 57.0 4.91e-01 97.5% 65.6%
4553544 3601.1.1.1 ↗ alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg 0.66 58.0 4.36e-01 98.7% 62.1%
3959614 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.65 57.0 5.50e-01 97.5% 85.6%
3284986 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.65 56.0 4.92e-01 97.5% 65.0%
4597624 3601.1.1.1 ↗ alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg 0.64 56.0 4.50e-01 100.0% 51.9%
4507097 3601.1.1.1 ↗ alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg 0.62 54.0 4.51e-01 100.0% 56.6%
3962562 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.62 58.0 5.21e-01 100.0% 98.1%
4083584 3601.1.1.0 ↗ alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain 0.61 54.0 4.42e-01 100.0% 54.7%
3290032 101.1.9.126 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_C, Rv2175c_wHTH 0.61 55.0 4.90e-01 97.5% 96.3%
4955372 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 3.86e-01 74.7% 75.5%
5010704 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 46.0 3.89e-01 91.1% 90.0%
4024777 5081.1.1.0 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like 0.55 43.0 3.38e-01 86.1% 48.6%
4968451 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.63e-01 88.6% 98.5%
4557831 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.52 43.0 3.37e-01 88.6% 89.4%
3205121 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.52 42.0 4.18e-01 89.9% 95.0%
5019931 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 3.55e-01 96.2% 86.0%
3755415 2484.1.1.236 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27940 0.51 42.0 3.15e-01 92.4% 85.2%