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MZ506873.1__QYA57180.1__X__00017
Bact-VirMZ506873.1__QYA57180.1__X__00017
Identity
- Accession:
- MZ506873 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-120
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1grlB01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.72 | 62.0 | 4.57e-01 | 95.7% | 96.7% |
| 6ks6a01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.69 | 61.0 | 4.36e-01 | 98.9% | 91.0% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 52.0 | 5.51e-01 | 89.2% | 91.6% |
| 4iu9B02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.68 | 55.0 | 4.25e-01 | 86.0% | 54.7% |
| 5x9vA01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.68 | 59.0 | 4.42e-01 | 98.9% | 98.0% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 50.0 | 4.15e-01 | 80.6% | 89.9% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 57.0 | 5.53e-01 | 94.6% | 91.2% |
| 6ks6q01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.66 | 57.0 | 4.19e-01 | 100.0% | 88.6% |
| 1sxjD03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.66 | 38.0 | 3.84e-01 | 72.0% | 57.1% |
| 3p9dE01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.65 | 57.0 | 4.17e-01 | 98.9% | 93.2% |
| 2kiwA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.64 | 53.0 | 5.48e-01 | 98.9% | 100.0% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.63 | 42.0 | 3.79e-01 | 72.0% | 49.6% |
| 1v4aA01 | 1.10.4050.10 | Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE | 0.62 | 50.0 | 4.76e-01 | 98.9% | 75.2% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.62 | 38.0 | 4.21e-01 | 96.8% | 76.3% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.61 | 50.0 | 5.07e-01 | 100.0% | 93.3% |
| 1hk3A03 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.61 | 49.0 | 4.97e-01 | 86.0% | 92.4% |
| 4oogC01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.61 | 42.0 | 3.47e-01 | 71.0% | 88.9% |
| 4x5mA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.61 | 44.0 | 4.55e-01 | 76.3% | 87.2% |
| 5zzjA02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.60 | 51.0 | 3.64e-01 | 96.8% | 85.9% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.60 | 43.0 | 4.55e-01 | 76.3% | 94.0% |
| 6ks6G01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.59 | 52.0 | 3.82e-01 | 100.0% | 38.8% |
| 1x9fC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 42.0 | 3.67e-01 | 77.4% | 100.0% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.58 | 46.0 | 4.67e-01 | 95.7% | 88.3% |
| 2qeuB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.58 | 53.0 | 4.65e-01 | 100.0% | 88.0% |
| 1f5oA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 49.0 | 4.22e-01 | 97.8% | 79.2% |
| 1xwjA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.56 | 45.0 | 4.00e-01 | 100.0% | 61.5% |
| 7dl9A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.55 | 46.0 | 3.62e-01 | 90.3% | 49.5% |
| 3fmsA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.55 | 40.0 | 3.51e-01 | 77.4% | 50.4% |
| 1fm2A00 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.54 | 43.0 | 3.72e-01 | 87.1% | 69.1% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.54 | 45.0 | 3.87e-01 | 92.5% | 97.4% |
| 6axfA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.54 | 42.0 | 3.88e-01 | 83.9% | 85.5% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.53 | 48.0 | 3.12e-01 | 100.0% | 24.8% |
| 3himA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 38.0 | 3.09e-01 | 77.4% | 48.4% |
| 2genA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 38.0 | 3.10e-01 | 78.5% | 47.9% |
| 2e9fB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.52 | 38.0 | 3.82e-01 | 81.7% | 75.0% |
| 4mo7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 38.0 | 3.32e-01 | 76.3% | 60.6% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 41.0 | 3.89e-01 | 100.0% | 73.9% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 36.0 | 3.78e-01 | 87.1% | 85.4% |
| 1xmxA03 | 1.10.10.680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Hypothetical protein VC1899 (Restriction endonuclease-like) | 0.50 | 37.0 | 3.82e-01 | 87.1% | 84.3% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3284785 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.79 | 56.0 | 5.23e-01 | 72.0% | 60.9% |
| 3602059 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.76 | 70.0 | 4.43e-01 | 100.0% | 81.4% |
| 3236092 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.71 | 56.0 | 5.96e-01 | 94.6% | 97.5% |
| 4068036 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.71 | 61.0 | 4.49e-01 | 95.7% | 93.7% |
| 3233591 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.70 | 51.0 | 3.92e-01 | 78.5% | 39.5% |
| 3617759 | 529.1.1.2 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › BSMAP | 0.69 | 50.0 | 5.55e-01 | 82.8% | 100.0% |
| 4290562 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.69 | 49.0 | 4.63e-01 | 97.8% | 62.7% |
| 4947815 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.68 | 49.0 | 4.84e-01 | 76.3% | 75.0% |
| 4971262 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.67 | 51.0 | 4.76e-01 | 94.6% | 65.2% |
| 3539071 | 109.4.1.910 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_MROH2B_C | 0.65 | 48.0 | 3.14e-01 | 77.4% | 26.1% |
| 3860575 | 150.3.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Hormone_1 | 0.65 | 52.0 | 4.02e-01 | 86.0% | 76.4% |
| 3697063 | 109.4.1.328 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2428 | 0.64 | 45.0 | 3.67e-01 | 73.1% | 41.7% |
| 3576275 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.64 | 46.0 | 4.11e-01 | 75.3% | 80.0% |
| 3504301 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.63 | 43.0 | 4.10e-01 | 71.0% | 84.5% |
| 3464273 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.62 | 44.0 | 4.05e-01 | 73.1% | 82.5% |
| 3577291 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 42.0 | 3.79e-01 | 72.0% | 50.0% |
| 3344037 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.61 | 46.0 | 3.63e-01 | 80.6% | 46.5% |
| 3528439 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.61 | 44.0 | 3.39e-01 | 78.5% | 33.2% |
| 3970782 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.61 | 44.0 | 3.38e-01 | 78.5% | 33.2% |
| 4182984 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.60 | 42.0 | 4.05e-01 | 73.1% | 72.7% |
| 3949321 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.60 | 44.0 | 3.34e-01 | 78.5% | 31.8% |
| 3942677 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.60 | 46.0 | 3.48e-01 | 81.7% | 45.2% |
| 3190074 | 109.4.1.929 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ECM29 | 0.59 | 44.0 | 3.11e-01 | 83.9% | 25.3% |
| 1490311 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.59 | 42.0 | 4.35e-01 | 76.3% | 84.3% |
| 3229637 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.59 | 43.0 | 2.92e-01 | 77.4% | 89.9% |
| 4020908 | 180.1.1.0 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase | 0.59 | 52.0 | 4.40e-01 | 100.0% | 64.4% |
| 4019402 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.59 | 49.0 | 3.67e-01 | 90.3% | 42.7% |
| 4956930 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.58 | 43.0 | 3.19e-01 | 97.8% | 30.0% |
| 3957267 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.58 | 44.0 | 3.33e-01 | 81.7% | 41.7% |
| 3901936 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.58 | 46.0 | 3.55e-01 | 86.0% | 47.4% |
| 5018280 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.57 | 43.0 | 3.25e-01 | 82.8% | 51.4% |
| 3193277 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.57 | 42.0 | 3.23e-01 | 80.6% | 46.7% |
| 4300458 | 198.1.1.22 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF2115 | 0.57 | 44.0 | 3.80e-01 | 82.8% | 88.3% |
| 4453085 | 7579.1.1.137 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › FrsA-like, Abhydrolase_6 | 0.56 | 50.0 | 3.26e-01 | 100.0% | 74.3% |
| 3289570 | 7579.1.1.96 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9, Abhydrolase_1 | 0.56 | 49.0 | 3.39e-01 | 95.7% | 28.7% |
| 3944935 | 6155.2.1.3 ↗ | alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › Imp-YgjV | 0.55 | 46.0 | 3.79e-01 | 89.2% | 56.9% |
| 3621305 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.55 | 48.0 | 4.08e-01 | 95.7% | 91.3% |
| 4641280 | 141.1.1.4 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C | 0.55 | 48.0 | 3.33e-01 | 100.0% | 58.0% |
| 3677653 | 109.4.1.935 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TOR1L1_N | 0.54 | 45.0 | 3.13e-01 | 92.5% | 30.3% |
| 5076674 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.54 | 45.0 | 3.22e-01 | 94.6% | 37.4% |
| 3981807 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.54 | 44.0 | 4.31e-01 | 91.4% | 83.0% |
| 3689020 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.53 | 47.0 | 3.33e-01 | 100.0% | 58.6% |
| 3980942 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.52 | 43.0 | 4.22e-01 | 94.6% | 85.0% |
| 3283706 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.52 | 38.0 | 3.42e-01 | 80.6% | 57.9% |
| 4031043 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.51 | 45.0 | 4.12e-01 | 100.0% | 73.3% |
| 3940705 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 40.0 | 2.70e-01 | 88.2% | 35.6% |