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MZ514874.1__QZI85281.1__X__00060

Bact-Vir

MZ514874.1__QZI85281.1__X__00060

Identity

Accession:
MZ514874 ↗
Kingdom:
phage

Quality

80.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-98
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14076.13 best DUF4258 42.6 8.80e-11 79.8% 100.0%
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.73 44.0 3.88e-01 97.9% 41.5%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.73 52.0 4.41e-01 98.9% 46.4%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.71 42.0 4.96e-01 91.5% 87.3%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 50.0 5.45e-01 100.0% 93.4%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.67 43.0 3.73e-01 97.9% 41.8%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 60.0 5.20e-01 98.9% 78.0%
7c5yA02 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 60.0 5.06e-01 100.0% 100.0%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 59.0 5.26e-01 98.9% 88.5%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 59.0 5.65e-01 100.0% 97.3%
3bb9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 59.0 5.36e-01 100.0% 97.6%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 58.0 5.22e-01 100.0% 85.7%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 58.0 5.40e-01 100.0% 93.3%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.65 42.0 4.31e-01 97.9% 68.5%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 59.0 5.57e-01 100.0% 93.8%
4lmiB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 58.0 5.12e-01 98.9% 76.5%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 45.0 3.83e-01 100.0% 43.9%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 58.0 5.27e-01 98.9% 89.4%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.64 37.0 3.97e-01 100.0% 66.3%
3t4nA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.63 42.0 4.19e-01 98.9% 65.6%
1tp6A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 56.0 5.10e-01 98.9% 98.4%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.62 47.0 4.91e-01 100.0% 87.4%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 55.0 5.23e-01 98.9% 90.1%
1kyfA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.62 43.0 4.09e-01 72.3% 71.7%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 55.0 3.77e-01 100.0% 29.2%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.60 46.0 3.97e-01 80.9% 97.3%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 42.0 3.57e-01 95.7% 45.0%
7rd0A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.60 45.0 3.12e-01 79.8% 94.1%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.59 53.0 3.51e-01 100.0% 49.9%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.59 37.0 3.75e-01 98.9% 63.0%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 39.0 3.42e-01 97.9% 43.5%
5c3vA01 3.30.800.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta 0.59 50.0 4.26e-01 97.9% 98.8%
3e5dA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 33.0 3.06e-01 90.4% 41.6%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 39.0 3.46e-01 97.9% 46.5%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.57 52.0 4.72e-01 98.9% 85.4%
1h54B01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.56 50.0 3.61e-01 100.0% 53.9%
2qguA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 50.0 4.89e-01 98.9% 98.0%
2e5aA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.56 31.0 3.11e-01 100.0% 50.5%
2pwwA00 3.30.310.100 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like 0.55 38.0 3.56e-01 71.3% 66.1%
4jf6A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 41.0 3.11e-01 80.9% 82.0%
3f8uB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 4.30e-01 96.8% 93.5%
1bebA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 47.0 4.04e-01 97.9% 64.1%
4ggtB00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.53 43.0 4.20e-01 97.9% 79.2%
3w15A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 3.03e-01 100.0% 25.7%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.53 47.0 3.28e-01 100.0% 35.0%
1a1xA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.51 45.0 4.37e-01 97.9% 94.3%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.60e-01 93.6% 56.4%
3qz4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 45.0 3.16e-01 100.0% 33.7%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4968653 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.85 72.0 7.24e-01 96.8% 90.5%
4968686 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.84 73.0 7.15e-01 97.9% 88.0%
4987659 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.82 73.0 7.46e-01 100.0% 100.0%
4968138 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.75 63.0 6.49e-01 98.9% 96.7%
5071733 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.74 55.0 5.67e-01 81.9% 82.2%
3241827 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.74 68.0 6.13e-01 100.0% 87.1%
3203022 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.72 65.0 5.75e-01 100.0% 93.3%
3324335 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.70 50.0 4.11e-01 97.9% 41.8%
3739821 331.4.1.3 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AdenylateSensor 0.68 46.0 4.46e-01 97.9% 62.9%
3743855 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.67 52.0 3.40e-01 100.0% 21.1%
4977517 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.67 43.0 4.75e-01 100.0% 82.7%
1949089 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.66 59.0 5.40e-01 98.9% 80.8%
6395 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.65 59.0 5.32e-01 98.9% 82.7%
3214007 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.65 41.0 3.75e-01 100.0% 47.2%
3962383 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.65 58.0 5.30e-01 98.9% 88.0%
1948932 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.65 58.0 5.58e-01 96.8% 94.3%
3540354 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 45.0 5.09e-01 93.6% 100.0%
3940101 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 52.0 4.84e-01 100.0% 69.2%
3465186 5.1.8.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.64 38.0 3.42e-01 100.0% 42.3%
169506 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.62 55.0 5.22e-01 98.9% 89.3%
5078190 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.62 44.0 3.17e-01 73.4% 28.7%
184879 243.1.1.8 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MlaC 0.62 55.0 4.46e-01 98.9% 79.3%
2522039 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.62 39.0 4.36e-01 86.2% 81.3%
4927742 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.61 54.0 5.37e-01 100.0% 100.0%
3613742 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 50.0 3.14e-01 100.0% 18.0%
3897847 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.60 38.0 3.15e-01 97.9% 36.1%
None 0.59 53.0 3.83e-01 100.0% 88.3%
None 0.58 53.0 3.68e-01 100.0% 59.7%
3577440 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.58 47.0 4.47e-01 90.4% 92.2%
3391001 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.58 49.0 3.79e-01 94.7% 70.9%
4556248 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.58 49.0 3.63e-01 93.6% 36.9%
3177145 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.58 38.0 3.81e-01 100.0% 64.0%
3924297 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.57 50.0 4.90e-01 96.8% 89.0%
3840117 207.2.1.83 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › VacA2 0.57 48.0 2.78e-01 90.4% 14.0%
3769924 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.57 51.0 4.58e-01 98.9% 76.9%
3279695 243.1.1.68 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF8175 0.56 50.0 4.11e-01 100.0% 89.7%
3468063 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.56 50.0 3.44e-01 100.0% 49.5%
3908724 71.1.1.1 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin 0.56 48.0 3.91e-01 95.7% 78.3%
3286732 243.1.1.72 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3071 0.56 48.0 4.79e-01 98.9% 92.0%
5031992 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.55 45.0 3.78e-01 86.2% 67.7%
3921266 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.55 50.0 3.13e-01 100.0% 20.2%
4504902 3222.1.1.1 a+b complex topology › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › AceK_regulatory 0.55 49.0 3.41e-01 100.0% 35.9%
3245468 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 43.0 4.03e-01 86.2% 92.5%
3342794 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.55 33.0 3.42e-01 89.4% 62.2%
4584262 3222.1.1.1 a+b complex topology › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › AceK_regulatory 0.54 48.0 3.40e-01 100.0% 33.9%
3785788 5.1.4.31 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C 0.54 48.0 3.05e-01 100.0% 19.4%
3421076 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.53 45.0 3.14e-01 100.0% 28.5%
4383522 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.53 47.0 3.01e-01 94.7% 27.4%
3377087 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 48.0 3.17e-01 100.0% 29.2%
3478405 3338.2.1.0 a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB 0.53 43.0 3.84e-01 100.0% 63.1%
4431772 3222.1.1.1 a+b complex topology › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › AceK_regulatory 0.53 48.0 3.41e-01 100.0% 33.6%
3722681 331.3.1.30 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3074 0.53 46.0 3.28e-01 100.0% 83.0%
4008068 11.1.4.25 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C 0.52 46.0 4.68e-01 96.8% 100.0%
3497399 881.4.1.0 a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB 0.52 38.0 3.96e-01 90.4% 84.7%
4029737 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 48.0 2.81e-01 100.0% 13.5%
4648495 5.1.3.48 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Gmad1 0.52 46.0 3.40e-01 100.0% 48.1%
4998245 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.52 41.0 3.54e-01 86.2% 67.7%
3724602 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.52 45.0 3.10e-01 100.0% 25.8%
3444588 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.52 47.0 3.12e-01 100.0% 26.8%
3433328 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 45.0 3.08e-01 100.0% 40.8%
3271023 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.52 35.0 2.92e-01 100.0% 38.4%
3949003 10.1.1.41 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.51 47.0 3.64e-01 100.0% 55.5%
3924601 5.1.5.18 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N 0.51 46.0 3.14e-01 100.0% 38.8%
4022437 9.1.1.11 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.51 43.0 3.62e-01 95.7% 63.6%
3859372 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.51 40.0 3.88e-01 97.9% 76.2%